RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 S4R3F8 94 aa10.99□□□□□ -0.65
VSX1-205ENST00000429762 KRTAP3-3Q9BYR6 98 aa10.96□□□□□ -0.66
VSX1-205ENST00000429762 LINC01558Q9Y6Z2 57 aa10.96□□□□□ -0.66
VSX1-205ENST00000429762 PRR15LQ9BU68 103 aa10.95□□□□□ -0.66
VSX1-205ENST00000429762 V9GYY9 64 aa10.95□□□□□ -0.66
VSX1-205ENST00000429762 UBR4Q5T4S7 5183 aa10.94□□□□□ -0.66
VSX1-205ENST00000429762 SPTSSBQ8NFR3 76 aa10.92□□□□□ -0.66
VSX1-205ENST00000429762 KRTAP19-2Q3LHN2 52 aa10.9□□□□□ -0.66
VSX1-205ENST00000429762 RNF213Q63HN8 5207 aa10.88□□□□□ -0.67
VSX1-205ENST00000429762 Q5VV11 94 aa10.84□□□□□ -0.67
VSX1-205ENST00000429762 A0A1B0GU69 56 aa10.81□□□□□ -0.68
VSX1-205ENST00000429762 CSAG1Q6PB30 78 aa10.68□□□□□ -0.7
VSX1-205ENST00000429762 SEC61GP60059 68 aa10.68□□□□□ -0.7
VSX1-205ENST00000429762 LCE2CQ5TA81 110 aa10.65□□□□□ -0.7
VSX1-205ENST00000429762 FLGP20930 4061 aaPredicted RBP10.64□□□□□ -0.71
VSX1-205ENST00000429762 A6NED7 52 aa10.59□□□□□ -0.71
VSX1-205ENST00000429762 FAT4Q6V0I7 4981 aa10.59□□□□□ -0.71
VSX1-205ENST00000429762 KRTAP3-2Q9BYR7 98 aa10.57□□□□□ -0.72
VSX1-205ENST00000429762 KRTAP10-6P60371 365 aaPredicted RBP10.55□□□□□ -0.72
VSX1-205ENST00000429762 ADM2Q7Z4H4 148 aa10.55□□□□□ -0.72
VSX1-205ENST00000429762 BRK1Q8WUW1 75 aa10.54□□□□□ -0.72
VSX1-205ENST00000429762 P0C880 135 aa10.52□□□□□ -0.72
VSX1-205ENST00000429762 A8MU10 97 aa10.52□□□□□ -0.73
VSX1-205ENST00000429762 SVIPQ8NHG7 77 aa10.48□□□□□ -0.73
VSX1-205ENST00000429762 A0A1B0GU33 70 aa10.46□□□□□ -0.73
VSX1-205ENST00000429762 UQCR11O14957 56 aa10.44□□□□□ -0.74
VSX1-205ENST00000429762 MT1HP80294 61 aa10.43□□□□□ -0.74
VSX1-205ENST00000429762 SPATA8Q6RVD6 105 aa10.39□□□□□ -0.75
VSX1-205ENST00000429762 H0YAA0 97 aa10.38□□□□□ -0.75
VSX1-205ENST00000429762 MIR22HGQ0VDD5 57 aa10.37□□□□□ -0.75
VSX1-205ENST00000429762 PRO0628Q9UI54 55 aa10.36□□□□□ -0.75
VSX1-205ENST00000429762 M0R2T5 61 aa10.35□□□□□ -0.75
VSX1-205ENST00000429762 CDC42SE1Q9NRR8 79 aa10.35□□□□□ -0.75
VSX1-205ENST00000429762 KRTAP13-4Q3LI77 160 aa10.34□□□□□ -0.75
VSX1-205ENST00000429762 LORP23490 312 aaPredicted RBP10.28□□□□□ -0.76
VSX1-205ENST00000429762 A0A0D9SG42 100 aa10.17□□□□□ -0.78
VSX1-205ENST00000429762 M0QZ58 72 aa10.15□□□□□ -0.78
VSX1-205ENST00000429762 R4GN34 69 aa10.12□□□□□ -0.79
VSX1-205ENST00000429762 LINC01554Q52M75 96 aa10.05□□□□□ -0.8
VSX1-205ENST00000429762 MT2AP02795 61 aa10.04□□□□□ -0.8
VSX1-205ENST00000429762 KRTAP9-8Q9BYQ0 159 aa10.04□□□□□ -0.8
VSX1-205ENST00000429762 MT1FP04733 61 aa10.01□□□□□ -0.81
VSX1-205ENST00000429762 KRTAP10-10P60014 251 aa9.95□□□□□ -0.82
VSX1-205ENST00000429762 LCE2AQ5TA79 106 aaPredicted RBP9.95□□□□□ -0.82
VSX1-205ENST00000429762 PMAIP1Q13794 54 aa9.92□□□□□ -0.82
VSX1-205ENST00000429762 KRTAP12-2P59991 146 aa9.9□□□□□ -0.82
VSX1-205ENST00000429762 CRIPTQ9P021 101 aa9.9□□□□□ -0.83
VSX1-205ENST00000429762 SPINT4Q6UDR6 99 aa9.89□□□□□ -0.83
VSX1-205ENST00000429762 KRTAP12-1P59990 96 aa9.88□□□□□ -0.83
VSX1-205ENST00000429762 A6NN06 94 aa9.86□□□□□ -0.83
VSX1-205ENST00000429762 K7ERS5 55 aa9.81□□□□□ -0.84
VSX1-205ENST00000429762 KRTAP19-1Q8IUB9 90 aa9.81□□□□□ -0.84
VSX1-205ENST00000429762 SPRR2GQ9BYE4 73 aa9.77□□□□□ -0.85
VSX1-205ENST00000429762 KRTAP9-3Q9BYQ3 159 aa9.67□□□□□ -0.86
VSX1-205ENST00000429762 KTN1-AS1Q86SY8 53 aa9.53□□□□□ -0.88
VSX1-205ENST00000429762 KRTAP19-8Q3LI54 63 aa9.51□□□□□ -0.89
VSX1-205ENST00000429762 CAMK2N1Q7Z7J9 78 aa9.5□□□□□ -0.89
VSX1-205ENST00000429762 ROMO1P60602 79 aa9.48□□□□□ -0.89
VSX1-205ENST00000429762 PLAC4Q8WY50 150 aa9.47□□□□□ -0.89
VSX1-205ENST00000429762 MT1BP07438 61 aa9.46□□□□□ -0.9
VSX1-205ENST00000429762 LCE2BO14633 110 aa9.44□□□□□ -0.9
VSX1-205ENST00000429762 PRAC1Q96KF2 57 aa9.42□□□□□ -0.9
VSX1-205ENST00000429762 C10orf95Q9H7T3 257 aa9.38□□□□□ -0.91
VSX1-205ENST00000429762 USH2AO75445 5202 aa9.23□□□□□ -0.93
VSX1-205ENST00000429762 MT1XP80297 61 aa9.16□□□□□ -0.94
VSX1-205ENST00000429762 KRTAP10-5P60370 271 aa9.14□□□□□ -0.95
VSX1-205ENST00000429762 KRTAP25-1Q3LHN0 102 aa9.06□□□□□ -0.96
VSX1-205ENST00000429762 TNP1P09430 55 aa8.99□□□□□ -0.97
VSX1-205ENST00000429762 LCE2DQ5TA82 110 aaPredicted RBP8.96□□□□□ -0.98
VSX1-205ENST00000429762 SSPOA2VEC9 5147 aa8.95□□□□□ -0.98
VSX1-205ENST00000429762 PRO2289Q9P1D8 64 aa8.93□□□□□ -0.98
VSX1-205ENST00000429762 FSIP2Q5CZC0 6907 aa8.89□□□□□ -0.99
VSX1-205ENST00000429762 KRTAP10-7P60409 375 aaPredicted RBP8.84□□□□□ -0.99
VSX1-205ENST00000429762 KRTAP19-6Q3LI70 58 aa8.75□□□□□ -1.01
VSX1-205ENST00000429762 LCE3AQ5TA76 89 aa8.72□□□□□ -1.01
VSX1-205ENST00000429762 KRTAP10-12P60413 245 aa8.68□□□□□ -1.02
VSX1-205ENST00000429762 KRTAP9-2Q9BYQ4 174 aa8.68□□□□□ -1.02
VSX1-205ENST00000429762 PP632Q6XCG6 107 aa8.66□□□□□ -1.02
VSX1-205ENST00000429762 KRTAP23-1A1A580 65 aa8.6□□□□□ -1.03
VSX1-205ENST00000429762 KMT2DO14686 5537 aa8.56□□□□□ -1.04
VSX1-205ENST00000429762 FCGBPQ9Y6R7 5405 aaPredicted RBP8.52□□□□□ -1.05
VSX1-205ENST00000429762 KRTAP4-8A0A0G2JLE6 195 aa8.52□□□□□ -1.05
VSX1-205ENST00000429762 KRTAP4-8Q9BYQ9 185 aa8.52□□□□□ -1.05
VSX1-205ENST00000429762 H3BS24 57 aa8.48□□□□□ -1.05
VSX1-205ENST00000429762 KRTAP8-1Q8IUC2 63 aa8.42□□□□□ -1.06
VSX1-205ENST00000429762 CRCT1Q9UGL9 99 aa8.36□□□□□ -1.07
VSX1-205ENST00000429762 KRTAP19-5Q3LI72 72 aa8.31□□□□□ -1.08
VSX1-205ENST00000429762 KRTAP12-3P60328 96 aa8.31□□□□□ -1.08
VSX1-205ENST00000429762 KRTAP19-7Q3SYF9 63 aa8.17□□□□□ -1.1
VSX1-205ENST00000429762 KRTAP15-1Q3LI76 137 aa8.13□□□□□ -1.11
VSX1-205ENST00000429762 MACF1Q9UPN3 7388 aaKnown RBP8.12□□□□□ -1.11
VSX1-205ENST00000429762 MT1EP04732 61 aa8.01□□□□□ -1.13
VSX1-205ENST00000429762 KRTAP9-6A0A140TA67 174 aa7.96□□□□□ -1.14
VSX1-205ENST00000429762 SYNE2Q8WXH0 6885 aaKnown RBP7.9□□□□□ -1.14
VSX1-205ENST00000429762 MUC12Q9UKN1 5478 aa7.87□□□□□ -1.15
VSX1-205ENST00000429762 SPRR2FQ96RM1 72 aa7.87□□□□□ -1.15
VSX1-205ENST00000429762 MT1LQ93083 61 aa7.86□□□□□ -1.15
VSX1-205ENST00000429762 A0A0A0MQY5 61 aa7.79□□□□□ -1.16
VSX1-205ENST00000429762 LCE3CQ5T5A8 94 aa7.76□□□□□ -1.17
VSX1-205ENST00000429762 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms