RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 S4R3F8 94 aa10.99□□□□□ -0.65
VSX1-205ENST00000429762 KRTAP3-3Q9BYR6 98 aa10.96□□□□□ -0.66
VSX1-205ENST00000429762 LINC01558Q9Y6Z2 57 aa10.96□□□□□ -0.66
VSX1-205ENST00000429762 PRR15LQ9BU68 103 aa10.95□□□□□ -0.66
VSX1-205ENST00000429762 V9GYY9 64 aa10.95□□□□□ -0.66
VSX1-205ENST00000429762 UBR4Q5T4S7 5183 aa10.94□□□□□ -0.66
VSX1-205ENST00000429762 SPTSSBQ8NFR3 76 aa10.92□□□□□ -0.66
VSX1-205ENST00000429762 KRTAP19-2Q3LHN2 52 aa10.9□□□□□ -0.66
VSX1-205ENST00000429762 RNF213Q63HN8 5207 aa10.88□□□□□ -0.67
VSX1-205ENST00000429762 Q5VV11 94 aa10.84□□□□□ -0.67
VSX1-205ENST00000429762 A0A1B0GU69 56 aa10.81□□□□□ -0.68
VSX1-205ENST00000429762 CSAG1Q6PB30 78 aa10.68□□□□□ -0.7
VSX1-205ENST00000429762 SEC61GP60059 68 aa10.68□□□□□ -0.7
VSX1-205ENST00000429762 LCE2CQ5TA81 110 aa10.65□□□□□ -0.7
VSX1-205ENST00000429762 FLGP20930 4061 aaPredicted RBP10.64□□□□□ -0.71
VSX1-205ENST00000429762 A6NED7 52 aa10.59□□□□□ -0.71
VSX1-205ENST00000429762 FAT4Q6V0I7 4981 aa10.59□□□□□ -0.71
VSX1-205ENST00000429762 KRTAP3-2Q9BYR7 98 aa10.57□□□□□ -0.72
VSX1-205ENST00000429762 KRTAP10-6P60371 365 aaPredicted RBP10.55□□□□□ -0.72
VSX1-205ENST00000429762 ADM2Q7Z4H4 148 aa10.55□□□□□ -0.72
VSX1-205ENST00000429762 BRK1Q8WUW1 75 aa10.54□□□□□ -0.72
VSX1-205ENST00000429762 P0C880 135 aa10.52□□□□□ -0.72
VSX1-205ENST00000429762 A8MU10 97 aa10.52□□□□□ -0.73
VSX1-205ENST00000429762 SVIPQ8NHG7 77 aa10.48□□□□□ -0.73
VSX1-205ENST00000429762 A0A1B0GU33 70 aa10.46□□□□□ -0.73
VSX1-205ENST00000429762 UQCR11O14957 56 aa10.44□□□□□ -0.74
VSX1-205ENST00000429762 MT1HP80294 61 aa10.43□□□□□ -0.74
VSX1-205ENST00000429762 SPATA8Q6RVD6 105 aa10.39□□□□□ -0.75
VSX1-205ENST00000429762 H0YAA0 97 aa10.38□□□□□ -0.75
VSX1-205ENST00000429762 MIR22HGQ0VDD5 57 aa10.37□□□□□ -0.75
VSX1-205ENST00000429762 PRO0628Q9UI54 55 aa10.36□□□□□ -0.75
VSX1-205ENST00000429762 M0R2T5 61 aa10.35□□□□□ -0.75
VSX1-205ENST00000429762 CDC42SE1Q9NRR8 79 aa10.35□□□□□ -0.75
VSX1-205ENST00000429762 KRTAP13-4Q3LI77 160 aa10.34□□□□□ -0.75
VSX1-205ENST00000429762 LORP23490 312 aaPredicted RBP10.28□□□□□ -0.76
VSX1-205ENST00000429762 A0A0D9SG42 100 aa10.17□□□□□ -0.78
VSX1-205ENST00000429762 M0QZ58 72 aa10.15□□□□□ -0.78
VSX1-205ENST00000429762 R4GN34 69 aa10.12□□□□□ -0.79
VSX1-205ENST00000429762 LINC01554Q52M75 96 aa10.05□□□□□ -0.8
VSX1-205ENST00000429762 MT2AP02795 61 aa10.04□□□□□ -0.8
VSX1-205ENST00000429762 KRTAP9-8Q9BYQ0 159 aa10.04□□□□□ -0.8
VSX1-205ENST00000429762 MT1FP04733 61 aa10.01□□□□□ -0.81
VSX1-205ENST00000429762 KRTAP10-10P60014 251 aa9.95□□□□□ -0.82
VSX1-205ENST00000429762 LCE2AQ5TA79 106 aaPredicted RBP9.95□□□□□ -0.82
VSX1-205ENST00000429762 PMAIP1Q13794 54 aa9.92□□□□□ -0.82
VSX1-205ENST00000429762 KRTAP12-2P59991 146 aa9.9□□□□□ -0.82
VSX1-205ENST00000429762 CRIPTQ9P021 101 aa9.9□□□□□ -0.83
VSX1-205ENST00000429762 SPINT4Q6UDR6 99 aa9.89□□□□□ -0.83
VSX1-205ENST00000429762 KRTAP12-1P59990 96 aa9.88□□□□□ -0.83
VSX1-205ENST00000429762 A6NN06 94 aa9.86□□□□□ -0.83
VSX1-205ENST00000429762 K7ERS5 55 aa9.81□□□□□ -0.84
VSX1-205ENST00000429762 KRTAP19-1Q8IUB9 90 aa9.81□□□□□ -0.84
VSX1-205ENST00000429762 SPRR2GQ9BYE4 73 aa9.77□□□□□ -0.85
VSX1-205ENST00000429762 KRTAP9-3Q9BYQ3 159 aa9.67□□□□□ -0.86
VSX1-205ENST00000429762 KTN1-AS1Q86SY8 53 aa9.53□□□□□ -0.88
VSX1-205ENST00000429762 KRTAP19-8Q3LI54 63 aa9.51□□□□□ -0.89
VSX1-205ENST00000429762 CAMK2N1Q7Z7J9 78 aa9.5□□□□□ -0.89
VSX1-205ENST00000429762 ROMO1P60602 79 aa9.48□□□□□ -0.89
VSX1-205ENST00000429762 PLAC4Q8WY50 150 aa9.47□□□□□ -0.89
VSX1-205ENST00000429762 MT1BP07438 61 aa9.46□□□□□ -0.9
VSX1-205ENST00000429762 LCE2BO14633 110 aa9.44□□□□□ -0.9
VSX1-205ENST00000429762 PRAC1Q96KF2 57 aa9.42□□□□□ -0.9
VSX1-205ENST00000429762 C10orf95Q9H7T3 257 aa9.38□□□□□ -0.91
VSX1-205ENST00000429762 USH2AO75445 5202 aa9.23□□□□□ -0.93
VSX1-205ENST00000429762 MT1XP80297 61 aa9.16□□□□□ -0.94
VSX1-205ENST00000429762 KRTAP10-5P60370 271 aa9.14□□□□□ -0.95
VSX1-205ENST00000429762 KRTAP25-1Q3LHN0 102 aa9.06□□□□□ -0.96
VSX1-205ENST00000429762 TNP1P09430 55 aa8.99□□□□□ -0.97
VSX1-205ENST00000429762 LCE2DQ5TA82 110 aaPredicted RBP8.96□□□□□ -0.98
VSX1-205ENST00000429762 SSPOA2VEC9 5147 aa8.95□□□□□ -0.98
VSX1-205ENST00000429762 PRO2289Q9P1D8 64 aa8.93□□□□□ -0.98
VSX1-205ENST00000429762 FSIP2Q5CZC0 6907 aa8.89□□□□□ -0.99
VSX1-205ENST00000429762 KRTAP10-7P60409 375 aaPredicted RBP8.84□□□□□ -0.99
VSX1-205ENST00000429762 KRTAP19-6Q3LI70 58 aa8.75□□□□□ -1.01
VSX1-205ENST00000429762 LCE3AQ5TA76 89 aa8.72□□□□□ -1.01
VSX1-205ENST00000429762 KRTAP10-12P60413 245 aa8.68□□□□□ -1.02
VSX1-205ENST00000429762 KRTAP9-2Q9BYQ4 174 aa8.68□□□□□ -1.02
VSX1-205ENST00000429762 PP632Q6XCG6 107 aa8.66□□□□□ -1.02
VSX1-205ENST00000429762 KRTAP23-1A1A580 65 aa8.6□□□□□ -1.03
VSX1-205ENST00000429762 KMT2DO14686 5537 aa8.56□□□□□ -1.04
VSX1-205ENST00000429762 FCGBPQ9Y6R7 5405 aaPredicted RBP8.52□□□□□ -1.05
VSX1-205ENST00000429762 KRTAP4-8A0A0G2JLE6 195 aa8.52□□□□□ -1.05
VSX1-205ENST00000429762 KRTAP4-8Q9BYQ9 185 aa8.52□□□□□ -1.05
VSX1-205ENST00000429762 H3BS24 57 aa8.48□□□□□ -1.05
VSX1-205ENST00000429762 KRTAP8-1Q8IUC2 63 aa8.42□□□□□ -1.06
VSX1-205ENST00000429762 CRCT1Q9UGL9 99 aa8.36□□□□□ -1.07
VSX1-205ENST00000429762 KRTAP19-5Q3LI72 72 aa8.31□□□□□ -1.08
VSX1-205ENST00000429762 KRTAP12-3P60328 96 aa8.31□□□□□ -1.08
VSX1-205ENST00000429762 KRTAP19-7Q3SYF9 63 aa8.17□□□□□ -1.1
VSX1-205ENST00000429762 KRTAP15-1Q3LI76 137 aa8.13□□□□□ -1.11
VSX1-205ENST00000429762 MACF1Q9UPN3 7388 aaKnown RBP8.12□□□□□ -1.11
VSX1-205ENST00000429762 MT1EP04732 61 aa8.01□□□□□ -1.13
VSX1-205ENST00000429762 KRTAP9-6A0A140TA67 174 aa7.96□□□□□ -1.14
VSX1-205ENST00000429762 SYNE2Q8WXH0 6885 aaKnown RBP7.9□□□□□ -1.14
VSX1-205ENST00000429762 MUC12Q9UKN1 5478 aa7.87□□□□□ -1.15
VSX1-205ENST00000429762 SPRR2FQ96RM1 72 aa7.87□□□□□ -1.15
VSX1-205ENST00000429762 MT1LQ93083 61 aa7.86□□□□□ -1.15
VSX1-205ENST00000429762 A0A0A0MQY5 61 aa7.79□□□□□ -1.16
VSX1-205ENST00000429762 LCE3CQ5T5A8 94 aa7.76□□□□□ -1.17
VSX1-205ENST00000429762 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms