RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 CSAG1Q6PB30 78 aa7.99□□□□□ -1.13
CTSD-203ENST00000429746 K7ERU9 68 aa7.95□□□□□ -1.14
CTSD-203ENST00000429746 IMUPQ9GZP8 106 aa7.95□□□□□ -1.14
CTSD-203ENST00000429746 MP68P56378 58 aa7.92□□□□□ -1.14
CTSD-203ENST00000429746 H3BPC8 53 aa7.89□□□□□ -1.15
CTSD-203ENST00000429746 A8MUN3 132 aa7.88□□□□□ -1.15
CTSD-203ENST00000429746 SPRR2GQ9BYE4 73 aa7.87□□□□□ -1.15
CTSD-203ENST00000429746 SCGB1A1P11684 91 aa7.85□□□□□ -1.15
CTSD-203ENST00000429746 FAM236AA0A1B0GUQ0 79 aa7.83□□□□□ -1.16
CTSD-203ENST00000429746 FAM236BA0A1B0GV22 79 aa7.83□□□□□ -1.16
CTSD-203ENST00000429746 MACF1Q9UPN3 7388 aaKnown RBP7.82□□□□□ -1.16
CTSD-203ENST00000429746 MT1BP07438 61 aa7.82□□□□□ -1.16
CTSD-203ENST00000429746 KRTAP19-8Q3LI54 63 aa7.81□□□□□ -1.16
CTSD-203ENST00000429746 DMAC1Q96GE9 116 aa7.79□□□□□ -1.16
CTSD-203ENST00000429746 H0YAA0 97 aa7.78□□□□□ -1.16
CTSD-203ENST00000429746 NDUFC1O43677 76 aa7.78□□□□□ -1.16
CTSD-203ENST00000429746 TRAV7A0A075B6U4 112 aa7.77□□□□□ -1.17
CTSD-203ENST00000429746 SMIM20Q8N5G0 67 aa7.72□□□□□ -1.17
CTSD-203ENST00000429746 SYNE2Q8WXH0 6885 aaKnown RBP7.7□□□□□ -1.18
CTSD-203ENST00000429746 KRTAP6-3Q3LI67 103 aa7.69□□□□□ -1.18
CTSD-203ENST00000429746 CRIPTQ9P021 101 aa7.68□□□□□ -1.18
CTSD-203ENST00000429746 Q5VV11 94 aa7.66□□□□□ -1.18
CTSD-203ENST00000429746 ADM2Q7Z4H4 148 aa7.64□□□□□ -1.19
CTSD-203ENST00000429746 KRTAP3-2Q9BYR7 98 aa7.61□□□□□ -1.19
CTSD-203ENST00000429746 SNURFQ9Y675 71 aa7.61□□□□□ -1.19
CTSD-203ENST00000429746 A6NN06 94 aa7.59□□□□□ -1.19
CTSD-203ENST00000429746 P0C880 135 aa7.59□□□□□ -1.19
CTSD-203ENST00000429746 SERP2Q8N6R1 65 aa7.58□□□□□ -1.2
CTSD-203ENST00000429746 KRTAP10-5P60370 271 aa7.55□□□□□ -1.2
CTSD-203ENST00000429746 ACYP2P14621 99 aa7.53□□□□□ -1.2
CTSD-203ENST00000429746 C20orf197Q8N268 126 aa7.53□□□□□ -1.2
CTSD-203ENST00000429746 SPANXA2-OT1Q8N9U9 137 aa7.49□□□□□ -1.21
CTSD-203ENST00000429746 COX7CP15954 63 aa7.39□□□□□ -1.23
CTSD-203ENST00000429746 CYSTM1Q9H1C7 97 aa7.39□□□□□ -1.23
CTSD-203ENST00000429746 R4GN34 69 aa7.39□□□□□ -1.23
CTSD-203ENST00000429746 M0QZ58 72 aa7.37□□□□□ -1.23
CTSD-203ENST00000429746 MT1XP80297 61 aa7.36□□□□□ -1.23
CTSD-203ENST00000429746 SPTSSBQ8NFR3 76 aa7.33□□□□□ -1.24
CTSD-203ENST00000429746 CHKB-CPT1BH3BT56 60 aa7.32□□□□□ -1.24
CTSD-203ENST00000429746 H7BZZ5 65 aa7.3□□□□□ -1.24
CTSD-203ENST00000429746 KRTAP5-9P26371 169 aa7.3□□□□□ -1.24
CTSD-203ENST00000429746 ANAPC13Q9BS18 74 aa7.27□□□□□ -1.25
CTSD-203ENST00000429746 COA5Q86WW8 74 aa7.26□□□□□ -1.25
CTSD-203ENST00000429746 NEBP20929 6669 aa7.25□□□□□ -1.25
CTSD-203ENST00000429746 PLAC4Q8WY50 150 aa7.23□□□□□ -1.25
CTSD-203ENST00000429746 PRO2289Q9P1D8 64 aa7.22□□□□□ -1.25
CTSD-203ENST00000429746 KRTAP13-4Q3LI77 160 aa7.21□□□□□ -1.26
CTSD-203ENST00000429746 LINC01554Q52M75 96 aa7.21□□□□□ -1.26
CTSD-203ENST00000429746 KMT2DO14686 5537 aa7.21□□□□□ -1.26
CTSD-203ENST00000429746 MUC12Q9UKN1 5478 aa7.2□□□□□ -1.26
CTSD-203ENST00000429746 CCDC179H3BU77 68 aa7.13□□□□□ -1.27
CTSD-203ENST00000429746 KRTAP20-1Q3LI63 56 aa7.13□□□□□ -1.27
CTSD-203ENST00000429746 KRTAP12-2P59991 146 aa7.11□□□□□ -1.27
CTSD-203ENST00000429746 PCP4P48539 62 aa7.04□□□□□ -1.28
CTSD-203ENST00000429746 MDN1Q9NU22 5596 aa7.03□□□□□ -1.28
CTSD-203ENST00000429746 KRTAP10-7P60409 375 aaPredicted RBP7.02□□□□□ -1.29
CTSD-203ENST00000429746 SPRR2FQ96RM1 72 aa7□□□□□ -1.29
CTSD-203ENST00000429746 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
CTSD-203ENST00000429746 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
CTSD-203ENST00000429746 KRTAP10-12P60413 245 aa6.98□□□□□ -1.29
CTSD-203ENST00000429746 KRTAP2-3P0C7H8 128 aa6.97□□□□□ -1.29
CTSD-203ENST00000429746 KRTAP2-4Q9BYR9 128 aa6.97□□□□□ -1.29
CTSD-203ENST00000429746 KRTAP8-1Q8IUC2 63 aa6.96□□□□□ -1.3
CTSD-203ENST00000429746 SPRR2EP22531 72 aa6.92□□□□□ -1.3
CTSD-203ENST00000429746 SPRR2BP35325 72 aa6.92□□□□□ -1.3
CTSD-203ENST00000429746 SPRR2AP35326 72 aa6.92□□□□□ -1.3
CTSD-203ENST00000429746 SPATA8Q6RVD6 105 aa6.92□□□□□ -1.3
CTSD-203ENST00000429746 SERP1Q9Y6X1 66 aa6.92□□□□□ -1.3
CTSD-203ENST00000429746 SEC61GP60059 68 aa6.9□□□□□ -1.3
CTSD-203ENST00000429746 A0A1B0GU33 70 aa6.89□□□□□ -1.31
CTSD-203ENST00000429746 ATP5EP56381 51 aaPredicted RBP6.87□□□□□ -1.31
CTSD-203ENST00000429746 TMEM258P61165 79 aa6.87□□□□□ -1.31
CTSD-203ENST00000429746 A0A0D9SG42 100 aa6.84□□□□□ -1.31
CTSD-203ENST00000429746 LCE1AQ5T7P2 110 aa6.84□□□□□ -1.31
CTSD-203ENST00000429746 KRTAP12-1P59990 96 aa6.82□□□□□ -1.32
CTSD-203ENST00000429746 A0A1B0GU69 56 aa6.81□□□□□ -1.32
CTSD-203ENST00000429746 CAMK2N1Q7Z7J9 78 aa6.77□□□□□ -1.33
CTSD-203ENST00000429746 KRTAP2-2Q9BYT5 123 aa6.74□□□□□ -1.33
CTSD-203ENST00000429746 KRTAP2-1Q9BYU5 128 aa6.74□□□□□ -1.33
CTSD-203ENST00000429746 LINC01558Q9Y6Z2 57 aa6.73□□□□□ -1.33
CTSD-203ENST00000429746 A8MU10 97 aa6.72□□□□□ -1.33
CTSD-203ENST00000429746 SPRR2DP22532 72 aa6.7□□□□□ -1.34
CTSD-203ENST00000429746 SPINT4Q6UDR6 99 aa6.7□□□□□ -1.34
CTSD-203ENST00000429746 SMIM26A0A096LP01 95 aa6.65□□□□□ -1.34
CTSD-203ENST00000429746 KRTAP19-7Q3SYF9 63 aa6.61□□□□□ -1.35
CTSD-203ENST00000429746 PRR15LQ9BU68 103 aa6.59□□□□□ -1.35
CTSD-203ENST00000429746 LCE3BQ5TA77 95 aa6.53□□□□□ -1.36
CTSD-203ENST00000429746 C10orf95Q9H7T3 257 aa6.53□□□□□ -1.36
CTSD-203ENST00000429746 MT1EP04732 61 aa6.5□□□□□ -1.37
CTSD-203ENST00000429746 RPS28P62857 69 aaKnown RBP6.49□□□□□ -1.37
CTSD-203ENST00000429746 UQCR11O14957 56 aa6.45□□□□□ -1.38
CTSD-203ENST00000429746 KRTAP19-5Q3LI72 72 aa6.42□□□□□ -1.38
CTSD-203ENST00000429746 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
CTSD-203ENST00000429746 Q1T7F1 81 aa6.39□□□□□ -1.39
CTSD-203ENST00000429746 KRTAP19-3Q7Z4W3 81 aa6.37□□□□□ -1.39
CTSD-203ENST00000429746 LCE3AQ5TA76 89 aa6.36□□□□□ -1.39
CTSD-203ENST00000429746 V9GYY9 64 aa6.34□□□□□ -1.39
CTSD-203ENST00000429746 MIR22HGQ0VDD5 57 aa6.33□□□□□ -1.4
CTSD-203ENST00000429746 PSPHP1O15172 72 aa6.32□□□□□ -1.4
CTSD-203ENST00000429746 TNP1P09430 55 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms