RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 Q5VSD8 79 aa5.07□□□□□ -1.6
GABPB1-205ENST00000429662 A0A087X002 238 aa5.06□□□□□ -1.6
GABPB1-205ENST00000429662 A6NED7 52 aa5.06□□□□□ -1.6
GABPB1-205ENST00000429662 LINC00313P59037 77 aa5.06□□□□□ -1.6
GABPB1-205ENST00000429662 SPINK6Q6UWN8 80 aa5.06□□□□□ -1.6
GABPB1-205ENST00000429662 NOTCH2NLQ7Z3S9 236 aa5.06□□□□□ -1.6
GABPB1-205ENST00000429662 CDC42SE1Q9NRR8 79 aa5.06□□□□□ -1.6
GABPB1-205ENST00000429662 TNXBP22105 4242 aa5.05□□□□□ -1.6
GABPB1-205ENST00000429662 FAT4Q6V0I7 4981 aa5.04□□□□□ -1.6
GABPB1-205ENST00000429662 SPAG11AQ6PDA7 123 aa5.04□□□□□ -1.6
GABPB1-205ENST00000429662 Q5W150 140 aa5.03□□□□□ -1.6
GABPB1-205ENST00000429662 DMAC1Q96GE9 116 aa5.02□□□□□ -1.61
GABPB1-205ENST00000429662 Q6ZSA8 131 aa5.01□□□□□ -1.61
GABPB1-205ENST00000429662 LCA10Q71F78 164 aa5.01□□□□□ -1.61
GABPB1-205ENST00000429662 IGKV2-30P06310 120 aa5□□□□□ -1.61
GABPB1-205ENST00000429662 PRR26Q8N8Z3 221 aa4.99□□□□□ -1.61
GABPB1-205ENST00000429662 KRTAP13-2Q52LG2 175 aa4.97□□□□□ -1.61
GABPB1-205ENST00000429662 KTN1-AS1Q86SY8 53 aa4.97□□□□□ -1.61
GABPB1-205ENST00000429662 SPTSSBQ8NFR3 76 aa4.97□□□□□ -1.61
GABPB1-205ENST00000429662 KRTAP16-1A8MUX0 517 aa4.95□□□□□ -1.62
GABPB1-205ENST00000429662 SPINK1P00995 79 aa4.95□□□□□ -1.62
GABPB1-205ENST00000429662 SEC61GP60059 68 aa4.95□□□□□ -1.62
GABPB1-205ENST00000429662 A6NN06 94 aa4.94□□□□□ -1.62
GABPB1-205ENST00000429662 SMR3BP02814 79 aaPredicted RBP4.94□□□□□ -1.62
GABPB1-205ENST00000429662 KRTAP10-1P60331 282 aa4.94□□□□□ -1.62
GABPB1-205ENST00000429662 RPS29P62273 56 aaKnown RBP4.94□□□□□ -1.62
GABPB1-205ENST00000429662 MUC2Q02817 5179 aa4.94□□□□□ -1.62
GABPB1-205ENST00000429662 A8MU10 97 aa4.93□□□□□ -1.62
GABPB1-205ENST00000429662 KRTAP1-4P0C5Y4 121 aa4.92□□□□□ -1.62
GABPB1-205ENST00000429662 SPINK7P58062 85 aa4.92□□□□□ -1.62
GABPB1-205ENST00000429662 A0A1B0GU69 56 aa4.91□□□□□ -1.62
GABPB1-205ENST00000429662 KRTAP10-4P60372 401 aaPredicted RBP4.91□□□□□ -1.62
GABPB1-205ENST00000429662 TYMSOSQ8TAI1 123 aa4.91□□□□□ -1.62
GABPB1-205ENST00000429662 C7orf65Q6ZTY9 151 aa4.9□□□□□ -1.63
GABPB1-205ENST00000429662 IGKV2D-30A0A075B6S6 120 aa4.89□□□□□ -1.63
GABPB1-205ENST00000429662 RETNLBQ9BQ08 111 aa4.88□□□□□ -1.63
GABPB1-205ENST00000429662 SPATA8Q6RVD6 105 aa4.87□□□□□ -1.63
GABPB1-205ENST00000429662 LPAP08519 4548 aa4.86□□□□□ -1.63
GABPB1-205ENST00000429662 UQCR11O14957 56 aa4.86□□□□□ -1.63
GABPB1-205ENST00000429662 MT1HL1P0DM35 61 aa4.85□□□□□ -1.63
GABPB1-205ENST00000429662 LINC00304Q8N9R0 145 aa4.85□□□□□ -1.63
GABPB1-205ENST00000429662 MIR22HGQ0VDD5 57 aa4.82□□□□□ -1.64
GABPB1-205ENST00000429662 RBM12B-AS1Q9P1G2 102 aa4.8□□□□□ -1.64
GABPB1-205ENST00000429662 A8MUU9 505 aa4.78□□□□□ -1.64
GABPB1-205ENST00000429662 C20orf166-AS1Q96NR2 134 aa4.78□□□□□ -1.64
GABPB1-205ENST00000429662 FSIP2Q5CZC0 6907 aa4.75□□□□□ -1.65
GABPB1-205ENST00000429662 KRTAP15-1Q3LI76 137 aa4.68□□□□□ -1.66
GABPB1-205ENST00000429662 C9orf92A6NGG3 77 aa4.65□□□□□ -1.66
GABPB1-205ENST00000429662 A0A1B0GU33 70 aa4.64□□□□□ -1.67
GABPB1-205ENST00000429662 COX6B2Q6YFQ2 88 aa4.64□□□□□ -1.67
GABPB1-205ENST00000429662 CRCT1Q9UGL9 99 aa4.63□□□□□ -1.67
GABPB1-205ENST00000429662 H1FX-AS1Q4G0G2 97 aa4.62□□□□□ -1.67
GABPB1-205ENST00000429662 PRAC1Q96KF2 57 aa4.62□□□□□ -1.67
GABPB1-205ENST00000429662 LINC01554Q52M75 96 aa4.6□□□□□ -1.67
GABPB1-205ENST00000429662 K7ERS5 55 aa4.59□□□□□ -1.67
GABPB1-205ENST00000429662 H0YAA0 97 aa4.58□□□□□ -1.68
GABPB1-205ENST00000429662 ADM2Q7Z4H4 148 aa4.58□□□□□ -1.68
GABPB1-205ENST00000429662 KRTAP10-8P60410 259 aa4.54□□□□□ -1.68
GABPB1-205ENST00000429662 RPL37P61927 97 aaKnown RBP4.53□□□□□ -1.68
GABPB1-205ENST00000429662 CSAG1Q6PB30 78 aa4.53□□□□□ -1.68
GABPB1-205ENST00000429662 KRTAP23-1A1A580 65 aa4.53□□□□□ -1.69
GABPB1-205ENST00000429662 MUC17Q685J3 4493 aa4.49□□□□□ -1.69
GABPB1-205ENST00000429662 KRTAP25-1Q3LHN0 102 aa4.48□□□□□ -1.69
GABPB1-205ENST00000429662 S4R3F8 94 aa4.46□□□□□ -1.7
GABPB1-205ENST00000429662 KRTAP10-6P60371 365 aaPredicted RBP4.42□□□□□ -1.7
GABPB1-205ENST00000429662 ROMO1P60602 79 aa4.42□□□□□ -1.7
GABPB1-205ENST00000429662 TPRXLQ17RH7 258 aa4.34□□□□□ -1.71
GABPB1-205ENST00000429662 M0QZ58 72 aa4.32□□□□□ -1.72
GABPB1-205ENST00000429662 KRTAP13-4Q3LI77 160 aa4.32□□□□□ -1.72
GABPB1-205ENST00000429662 A0A0D9SG42 100 aa4.31□□□□□ -1.72
GABPB1-205ENST00000429662 SSPOA2VEC9 5147 aa4.31□□□□□ -1.72
GABPB1-205ENST00000429662 P0C880 135 aa4.29□□□□□ -1.72
GABPB1-205ENST00000429662 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
GABPB1-205ENST00000429662 CRIPTQ9P021 101 aa4.26□□□□□ -1.73
GABPB1-205ENST00000429662 USH2AO75445 5202 aa4.25□□□□□ -1.73
GABPB1-205ENST00000429662 KRTAP4-1Q9BYQ7 146 aa4.24□□□□□ -1.73
GABPB1-205ENST00000429662 KRTAP12-1P59990 96 aa4.22□□□□□ -1.73
GABPB1-205ENST00000429662 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
GABPB1-205ENST00000429662 FCGBPQ9Y6R7 5405 aaPredicted RBP4.21□□□□□ -1.73
GABPB1-205ENST00000429662 SPINT4Q6UDR6 99 aa4.21□□□□□ -1.74
GABPB1-205ENST00000429662 SEC61BP60468 96 aaKnown RBP4.2□□□□□ -1.74
GABPB1-205ENST00000429662 KRTAP19-2Q3LHN2 52 aa4.2□□□□□ -1.74
GABPB1-205ENST00000429662 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
GABPB1-205ENST00000429662 SYNE2Q8WXH0 6885 aaKnown RBP4.17□□□□□ -1.74
GABPB1-205ENST00000429662 FLGP20930 4061 aaPredicted RBP4.15□□□□□ -1.74
GABPB1-205ENST00000429662 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.74
GABPB1-205ENST00000429662 MT1HP80294 61 aa4.14□□□□□ -1.75
GABPB1-205ENST00000429662 R4GN34 69 aa4.13□□□□□ -1.75
GABPB1-205ENST00000429662 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
GABPB1-205ENST00000429662 KRTAP10-7P60409 375 aaPredicted RBP4.06□□□□□ -1.76
GABPB1-205ENST00000429662 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
GABPB1-205ENST00000429662 PP632Q6XCG6 107 aa4□□□□□ -1.77
GABPB1-205ENST00000429662 NEBP20929 6669 aa3.97□□□□□ -1.77
GABPB1-205ENST00000429662 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
GABPB1-205ENST00000429662 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
GABPB1-205ENST00000429662 CAMK2N1Q7Z7J9 78 aa3.92□□□□□ -1.78
GABPB1-205ENST00000429662 PLAC4Q8WY50 150 aa3.9□□□□□ -1.78
GABPB1-205ENST00000429662 MUC12Q9UKN1 5478 aa3.9□□□□□ -1.79
GABPB1-205ENST00000429662 KRTAP6-3Q3LI67 103 aa3.89□□□□□ -1.79
GABPB1-205ENST00000429662 TNP1P09430 55 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms