RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 RPL37P61927 97 aaKnown RBP5.84□□□□□ -1.47
HIPK2-203ENST00000428878 A8MUU9 505 aa5.84□□□□□ -1.47
HIPK2-203ENST00000428878 M0R2T5 61 aa5.83□□□□□ -1.48
HIPK2-203ENST00000428878 PRAC1Q96KF2 57 aa5.83□□□□□ -1.48
HIPK2-203ENST00000428878 KRTAP13-3Q3SY46 172 aa5.82□□□□□ -1.48
HIPK2-203ENST00000428878 Q75L30 129 aa5.82□□□□□ -1.48
HIPK2-203ENST00000428878 C20orf166-AS1Q96NR2 134 aa5.82□□□□□ -1.48
HIPK2-203ENST00000428878 LCA10Q71F78 164 aa5.82□□□□□ -1.48
HIPK2-203ENST00000428878 SEC61BP60468 96 aaKnown RBP5.81□□□□□ -1.48
HIPK2-203ENST00000428878 A0A0A0MQY5 61 aa5.8□□□□□ -1.48
HIPK2-203ENST00000428878 DMAC1Q96GE9 116 aa5.8□□□□□ -1.48
HIPK2-203ENST00000428878 S4R3F8 94 aa5.76□□□□□ -1.49
HIPK2-203ENST00000428878 LRP2P98164 4655 aa5.73□□□□□ -1.49
HIPK2-203ENST00000428878 Q5VV11 94 aa5.72□□□□□ -1.49
HIPK2-203ENST00000428878 SPATA8Q6RVD6 105 aa5.71□□□□□ -1.49
HIPK2-203ENST00000428878 ADM2Q7Z4H4 148 aa5.69□□□□□ -1.5
HIPK2-203ENST00000428878 UQCR11O14957 56 aa5.69□□□□□ -1.5
HIPK2-203ENST00000428878 SPINT4Q6UDR6 99 aa5.69□□□□□ -1.5
HIPK2-203ENST00000428878 MIR22HGQ0VDD5 57 aa5.68□□□□□ -1.5
HIPK2-203ENST00000428878 TPRXLQ17RH7 258 aa5.68□□□□□ -1.5
HIPK2-203ENST00000428878 CSAG1Q6PB30 78 aa5.68□□□□□ -1.5
HIPK2-203ENST00000428878 LPAP08519 4548 aa5.65□□□□□ -1.51
HIPK2-203ENST00000428878 A0A1B0GU33 70 aa5.65□□□□□ -1.51
HIPK2-203ENST00000428878 LINC01558Q9Y6Z2 57 aa5.65□□□□□ -1.51
HIPK2-203ENST00000428878 K7ERS5 55 aa5.64□□□□□ -1.51
HIPK2-203ENST00000428878 UBR4Q5T4S7 5183 aa5.64□□□□□ -1.51
HIPK2-203ENST00000428878 H1FX-AS1Q4G0G2 97 aa5.62□□□□□ -1.51
HIPK2-203ENST00000428878 KRTAP3-1Q9BYR8 98 aa5.61□□□□□ -1.51
HIPK2-203ENST00000428878 CRIPTQ9P021 101 aa5.59□□□□□ -1.51
HIPK2-203ENST00000428878 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
HIPK2-203ENST00000428878 R4GN34 69 aa5.55□□□□□ -1.52
HIPK2-203ENST00000428878 M0QZ58 72 aa5.54□□□□□ -1.52
HIPK2-203ENST00000428878 MUC17Q685J3 4493 aa5.52□□□□□ -1.53
HIPK2-203ENST00000428878 MUC2Q02817 5179 aa5.52□□□□□ -1.53
HIPK2-203ENST00000428878 P0C880 135 aa5.51□□□□□ -1.53
HIPK2-203ENST00000428878 RNF213Q63HN8 5207 aa5.47□□□□□ -1.53
HIPK2-203ENST00000428878 KRTAP4-1Q9BYQ7 146 aa5.45□□□□□ -1.54
HIPK2-203ENST00000428878 CAMK2N1Q7Z7J9 78 aa5.42□□□□□ -1.54
HIPK2-203ENST00000428878 H0YAA0 97 aa5.36□□□□□ -1.55
HIPK2-203ENST00000428878 ROMO1P60602 79 aa5.32□□□□□ -1.56
HIPK2-203ENST00000428878 KRTAP3-3Q9BYR6 98 aa5.31□□□□□ -1.56
HIPK2-203ENST00000428878 KRTAP10-10P60014 251 aa5.31□□□□□ -1.56
HIPK2-203ENST00000428878 FAT4Q6V0I7 4981 aa5.3□□□□□ -1.56
HIPK2-203ENST00000428878 KRTAP13-4Q3LI77 160 aa5.27□□□□□ -1.57
HIPK2-203ENST00000428878 NDUFAF8A1L188 74 aa5.22□□□□□ -1.57
HIPK2-203ENST00000428878 KRTAP10-6P60371 365 aaPredicted RBP5.22□□□□□ -1.57
HIPK2-203ENST00000428878 LORP23490 312 aaPredicted RBP5.21□□□□□ -1.58
HIPK2-203ENST00000428878 FSIP2Q5CZC0 6907 aa5.19□□□□□ -1.58
HIPK2-203ENST00000428878 C10orf95Q9H7T3 257 aa5.17□□□□□ -1.58
HIPK2-203ENST00000428878 KRTAP3-2Q9BYR7 98 aa5.16□□□□□ -1.58
HIPK2-203ENST00000428878 KRTAP12-2P59991 146 aa5.15□□□□□ -1.59
HIPK2-203ENST00000428878 PLAC4Q8WY50 150 aa5.14□□□□□ -1.59
HIPK2-203ENST00000428878 FLGP20930 4061 aaPredicted RBP5.14□□□□□ -1.59
HIPK2-203ENST00000428878 LUZP6Q538Z0 58 aa5.12□□□□□ -1.59
HIPK2-203ENST00000428878 KRTAP25-1Q3LHN0 102 aa5.09□□□□□ -1.6
HIPK2-203ENST00000428878 KRTAP12-1P59990 96 aa5.03□□□□□ -1.6
HIPK2-203ENST00000428878 LCE2AQ5TA79 106 aaPredicted RBP5□□□□□ -1.61
HIPK2-203ENST00000428878 MT1HP80294 61 aa4.99□□□□□ -1.61
HIPK2-203ENST00000428878 KRTAP15-1Q3LI76 137 aa4.94□□□□□ -1.62
HIPK2-203ENST00000428878 KRTAP19-2Q3LHN2 52 aa4.92□□□□□ -1.62
HIPK2-203ENST00000428878 LCE2CQ5TA81 110 aa4.88□□□□□ -1.63
HIPK2-203ENST00000428878 MT1FP04733 61 aa4.87□□□□□ -1.63
HIPK2-203ENST00000428878 TNP1P09430 55 aa4.85□□□□□ -1.63
HIPK2-203ENST00000428878 MT2AP02795 61 aa4.85□□□□□ -1.63
HIPK2-203ENST00000428878 USH2AO75445 5202 aa4.77□□□□□ -1.65
HIPK2-203ENST00000428878 KRTAP9-2Q9BYQ4 174 aa4.71□□□□□ -1.66
HIPK2-203ENST00000428878 KRTAP9-8Q9BYQ0 159 aa4.68□□□□□ -1.66
HIPK2-203ENST00000428878 LCE2DQ5TA82 110 aaPredicted RBP4.68□□□□□ -1.66
HIPK2-203ENST00000428878 KRTAP19-1Q8IUB9 90 aa4.67□□□□□ -1.66
HIPK2-203ENST00000428878 PRO2289Q9P1D8 64 aa4.64□□□□□ -1.67
HIPK2-203ENST00000428878 SPRR2GQ9BYE4 73 aa4.58□□□□□ -1.68
HIPK2-203ENST00000428878 KRTAP9-6A0A140TA67 174 aa4.56□□□□□ -1.68
HIPK2-203ENST00000428878 SSPOA2VEC9 5147 aa4.54□□□□□ -1.68
HIPK2-203ENST00000428878 LCE3AQ5TA76 89 aa4.52□□□□□ -1.69
HIPK2-203ENST00000428878 LCE2BO14633 110 aa4.49□□□□□ -1.69
HIPK2-203ENST00000428878 KRTAP9-3Q9BYQ3 159 aa4.49□□□□□ -1.69
HIPK2-203ENST00000428878 MT1BP07438 61 aa4.48□□□□□ -1.69
HIPK2-203ENST00000428878 KRTAP10-12P60413 245 aa4.48□□□□□ -1.69
HIPK2-203ENST00000428878 KMT2DO14686 5537 aa4.47□□□□□ -1.69
HIPK2-203ENST00000428878 PP632Q6XCG6 107 aa4.46□□□□□ -1.7
HIPK2-203ENST00000428878 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.7
HIPK2-203ENST00000428878 KRTAP10-7P60409 375 aaPredicted RBP4.42□□□□□ -1.7
HIPK2-203ENST00000428878 KRTAP4-8A0A0G2JLE6 195 aa4.39□□□□□ -1.71
HIPK2-203ENST00000428878 MT1XP80297 61 aa4.39□□□□□ -1.71
HIPK2-203ENST00000428878 KRTAP4-8Q9BYQ9 185 aa4.39□□□□□ -1.71
HIPK2-203ENST00000428878 KRTAP10-5P60370 271 aa4.36□□□□□ -1.71
HIPK2-203ENST00000428878 KRTAP19-8Q3LI54 63 aa4.36□□□□□ -1.71
HIPK2-203ENST00000428878 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
HIPK2-203ENST00000428878 CRCT1Q9UGL9 99 aa4.32□□□□□ -1.72
HIPK2-203ENST00000428878 FCGBPQ9Y6R7 5405 aaPredicted RBP4.32□□□□□ -1.72
HIPK2-203ENST00000428878 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
HIPK2-203ENST00000428878 KRTAP8-1Q8IUC2 63 aa4.26□□□□□ -1.73
HIPK2-203ENST00000428878 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
HIPK2-203ENST00000428878 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
HIPK2-203ENST00000428878 SYNE2Q8WXH0 6885 aaKnown RBP4.18□□□□□ -1.74
HIPK2-203ENST00000428878 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
HIPK2-203ENST00000428878 MACF1Q9UPN3 7388 aaKnown RBP4.13□□□□□ -1.75
HIPK2-203ENST00000428878 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
HIPK2-203ENST00000428878 MUC12Q9UKN1 5478 aa4.12□□□□□ -1.75
HIPK2-203ENST00000428878 KRTAP23-1A1A580 65 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms