RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 S4R3F8 94 aa6.3□□□□□ -1.4
HMGB3P4-201ENST00000428776 RNF213Q63HN8 5207 aa6.27□□□□□ -1.41
HMGB3P4-201ENST00000428776 MUC2Q02817 5179 aa6.27□□□□□ -1.41
HMGB3P4-201ENST00000428776 LCA10Q71F78 164 aa6.27□□□□□ -1.41
HMGB3P4-201ENST00000428776 SPTSSBQ8NFR3 76 aa6.27□□□□□ -1.41
HMGB3P4-201ENST00000428776 LCE2CQ5TA81 110 aa6.23□□□□□ -1.41
HMGB3P4-201ENST00000428776 SMIM26A0A096LP01 95 aa6.22□□□□□ -1.41
HMGB3P4-201ENST00000428776 CSAG1Q6PB30 78 aa6.18□□□□□ -1.42
HMGB3P4-201ENST00000428776 LCE2BO14633 110 aa6.14□□□□□ -1.43
HMGB3P4-201ENST00000428776 V9GYY9 64 aa6.14□□□□□ -1.43
HMGB3P4-201ENST00000428776 Q1T7F1 81 aa6.13□□□□□ -1.43
HMGB3P4-201ENST00000428776 MT1HP80294 61 aa6.11□□□□□ -1.43
HMGB3P4-201ENST00000428776 LINC01558Q9Y6Z2 57 aa6.11□□□□□ -1.43
HMGB3P4-201ENST00000428776 FLGP20930 4061 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P4-201ENST00000428776 SEC61GP60059 68 aa6.07□□□□□ -1.44
HMGB3P4-201ENST00000428776 M0R2T5 61 aa6.06□□□□□ -1.44
HMGB3P4-201ENST00000428776 A0A1B0GU69 56 aa6.05□□□□□ -1.44
HMGB3P4-201ENST00000428776 H0YAA0 97 aa6.05□□□□□ -1.44
HMGB3P4-201ENST00000428776 PRR15LQ9BU68 103 aa6.05□□□□□ -1.44
HMGB3P4-201ENST00000428776 FAT4Q6V0I7 4981 aa6.04□□□□□ -1.44
HMGB3P4-201ENST00000428776 PSPHP1O15172 72 aa5.99□□□□□ -1.45
HMGB3P4-201ENST00000428776 ADM2Q7Z4H4 148 aa5.99□□□□□ -1.45
HMGB3P4-201ENST00000428776 KRTAP10-6P60371 365 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P4-201ENST00000428776 LCE2AQ5TA79 106 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P4-201ENST00000428776 Q5VV11 94 aa5.94□□□□□ -1.46
HMGB3P4-201ENST00000428776 P0C880 135 aa5.93□□□□□ -1.46
HMGB3P4-201ENST00000428776 SVIPQ8NHG7 77 aa5.92□□□□□ -1.46
HMGB3P4-201ENST00000428776 A0A1B0GU33 70 aa5.91□□□□□ -1.46
HMGB3P4-201ENST00000428776 LORP23490 312 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P4-201ENST00000428776 KRTAP9-8Q9BYQ0 159 aa5.87□□□□□ -1.47
HMGB3P4-201ENST00000428776 UQCR11O14957 56 aa5.86□□□□□ -1.47
HMGB3P4-201ENST00000428776 MT2AP02795 61 aa5.85□□□□□ -1.47
HMGB3P4-201ENST00000428776 A6NED7 52 aa5.83□□□□□ -1.48
HMGB3P4-201ENST00000428776 CRIPTQ9P021 101 aa5.83□□□□□ -1.48
HMGB3P4-201ENST00000428776 M0QZ58 72 aa5.82□□□□□ -1.48
HMGB3P4-201ENST00000428776 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
HMGB3P4-201ENST00000428776 MT1FP04733 61 aa5.8□□□□□ -1.48
HMGB3P4-201ENST00000428776 R4GN34 69 aa5.8□□□□□ -1.48
HMGB3P4-201ENST00000428776 SPATA8Q6RVD6 105 aa5.78□□□□□ -1.48
HMGB3P4-201ENST00000428776 MIR22HGQ0VDD5 57 aa5.77□□□□□ -1.49
HMGB3P4-201ENST00000428776 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
HMGB3P4-201ENST00000428776 CDC42SE1Q9NRR8 79 aa5.72□□□□□ -1.49
HMGB3P4-201ENST00000428776 SPRR2GQ9BYE4 73 aa5.7□□□□□ -1.5
HMGB3P4-201ENST00000428776 BRK1Q8WUW1 75 aa5.68□□□□□ -1.5
HMGB3P4-201ENST00000428776 A8MU10 97 aa5.67□□□□□ -1.5
HMGB3P4-201ENST00000428776 KRTAP19-1Q8IUB9 90 aa5.67□□□□□ -1.5
HMGB3P4-201ENST00000428776 KRTAP9-3Q9BYQ3 159 aa5.67□□□□□ -1.5
HMGB3P4-201ENST00000428776 A0A0D9SG42 100 aa5.66□□□□□ -1.5
HMGB3P4-201ENST00000428776 LINC01554Q52M75 96 aa5.66□□□□□ -1.5
HMGB3P4-201ENST00000428776 A6NN06 94 aa5.61□□□□□ -1.51
HMGB3P4-201ENST00000428776 KRTAP12-1P59990 96 aa5.57□□□□□ -1.52
HMGB3P4-201ENST00000428776 KRTAP19-8Q3LI54 63 aa5.57□□□□□ -1.52
HMGB3P4-201ENST00000428776 K7ERS5 55 aa5.56□□□□□ -1.52
HMGB3P4-201ENST00000428776 SPINT4Q6UDR6 99 aa5.55□□□□□ -1.52
HMGB3P4-201ENST00000428776 KRTAP12-2P59991 146 aa5.54□□□□□ -1.52
HMGB3P4-201ENST00000428776 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
HMGB3P4-201ENST00000428776 KRTAP4-6Q9BYQ5 205 aa5.52□□□□□ -1.53
HMGB3P4-201ENST00000428776 PRO0628Q9UI54 55 aa5.52□□□□□ -1.53
HMGB3P4-201ENST00000428776 PLAC4Q8WY50 150 aa5.51□□□□□ -1.53
HMGB3P4-201ENST00000428776 MT1BP07438 61 aa5.48□□□□□ -1.53
HMGB3P4-201ENST00000428776 CAMK2N1Q7Z7J9 78 aa5.43□□□□□ -1.54
HMGB3P4-201ENST00000428776 KRTAP9-2Q9BYQ4 174 aa5.39□□□□□ -1.55
HMGB3P4-201ENST00000428776 PMAIP1Q13794 54 aa5.38□□□□□ -1.55
HMGB3P4-201ENST00000428776 USH2AO75445 5202 aa5.32□□□□□ -1.56
HMGB3P4-201ENST00000428776 ROMO1P60602 79 aa5.29□□□□□ -1.56
HMGB3P4-201ENST00000428776 KRTAP10-5P60370 271 aa5.28□□□□□ -1.56
HMGB3P4-201ENST00000428776 MT1XP80297 61 aa5.28□□□□□ -1.56
HMGB3P4-201ENST00000428776 C10orf95Q9H7T3 257 aa5.28□□□□□ -1.56
HMGB3P4-201ENST00000428776 PRO2289Q9P1D8 64 aa5.28□□□□□ -1.56
HMGB3P4-201ENST00000428776 KRTAP9-6A0A140TA67 174 aa5.26□□□□□ -1.57
HMGB3P4-201ENST00000428776 KRTAP19-6Q3LI70 58 aa5.22□□□□□ -1.57
HMGB3P4-201ENST00000428776 SSPOA2VEC9 5147 aa5.19□□□□□ -1.58
HMGB3P4-201ENST00000428776 KRTAP25-1Q3LHN0 102 aa5.16□□□□□ -1.58
HMGB3P4-201ENST00000428776 TNP1P09430 55 aa5.15□□□□□ -1.59
HMGB3P4-201ENST00000428776 FSIP2Q5CZC0 6907 aa5.14□□□□□ -1.59
HMGB3P4-201ENST00000428776 KTN1-AS1Q86SY8 53 aa5.12□□□□□ -1.59
HMGB3P4-201ENST00000428776 CRCT1Q9UGL9 99 aa5.11□□□□□ -1.59
HMGB3P4-201ENST00000428776 KRTAP10-7P60409 375 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P4-201ENST00000428776 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
HMGB3P4-201ENST00000428776 KRTAP4-8Q9BYQ9 185 aa5.03□□□□□ -1.6
HMGB3P4-201ENST00000428776 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
HMGB3P4-201ENST00000428776 KRTAP23-1A1A580 65 aa5□□□□□ -1.61
HMGB3P4-201ENST00000428776 PP632Q6XCG6 107 aa4.97□□□□□ -1.61
HMGB3P4-201ENST00000428776 FCGBPQ9Y6R7 5405 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P4-201ENST00000428776 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P4-201ENST00000428776 LCE3AQ5TA76 89 aa4.92□□□□□ -1.62
HMGB3P4-201ENST00000428776 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
HMGB3P4-201ENST00000428776 KRTAP8-1Q8IUC2 63 aa4.84□□□□□ -1.63
HMGB3P4-201ENST00000428776 KRTAP4-12Q9BQ66 201 aa4.79□□□□□ -1.64
HMGB3P4-201ENST00000428776 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
HMGB3P4-201ENST00000428776 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
HMGB3P4-201ENST00000428776 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
HMGB3P4-201ENST00000428776 KMT2DO14686 5537 aa4.72□□□□□ -1.65
HMGB3P4-201ENST00000428776 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
HMGB3P4-201ENST00000428776 KRTAP19-7Q3SYF9 63 aa4.71□□□□□ -1.66
HMGB3P4-201ENST00000428776 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
HMGB3P4-201ENST00000428776 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
HMGB3P4-201ENST00000428776 MACF1Q9UPN3 7388 aaKnown RBP4.67□□□□□ -1.66
HMGB3P4-201ENST00000428776 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
HMGB3P4-201ENST00000428776 MT1EP04732 61 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms