RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 C20orf166-AS1Q96NR2 134 aa6.26□□□□□ -1.41
FIRRE-201ENST00000427391 KRTAP4-5Q9BYR2 181 aa6.26□□□□□ -1.41
FIRRE-201ENST00000427391 ABCA13Q86UQ4 5058 aa6.26□□□□□ -1.41
FIRRE-201ENST00000427391 TNXBP22105 4242 aa6.26□□□□□ -1.41
FIRRE-201ENST00000427391 BIRC6Q9NR09 4857 aa6.25□□□□□ -1.41
FIRRE-201ENST00000427391 MIR22HGQ0VDD5 57 aa6.24□□□□□ -1.41
FIRRE-201ENST00000427391 PCLOQ9Y6V0 5065 aa6.23□□□□□ -1.41
FIRRE-201ENST00000427391 KRTAP3-1Q9BYR8 98 aa6.22□□□□□ -1.41
FIRRE-201ENST00000427391 Q5VSD8 79 aa6.19□□□□□ -1.42
FIRRE-201ENST00000427391 HERC2O95714 4834 aa6.15□□□□□ -1.42
FIRRE-201ENST00000427391 KRTAP10-8P60410 259 aa6.14□□□□□ -1.43
FIRRE-201ENST00000427391 UQCR11O14957 56 aa6.14□□□□□ -1.43
FIRRE-201ENST00000427391 P0C880 135 aa6.13□□□□□ -1.43
FIRRE-201ENST00000427391 SPATA8Q6RVD6 105 aa6.13□□□□□ -1.43
FIRRE-201ENST00000427391 LUZP6Q538Z0 58 aa6.09□□□□□ -1.43
FIRRE-201ENST00000427391 HERC1Q15751 4861 aa6.06□□□□□ -1.44
FIRRE-201ENST00000427391 COX6B2Q6YFQ2 88 aa6.05□□□□□ -1.44
FIRRE-201ENST00000427391 KRTAP25-1Q3LHN0 102 aa6.05□□□□□ -1.44
FIRRE-201ENST00000427391 LPAP08519 4548 aa6.04□□□□□ -1.44
FIRRE-201ENST00000427391 XP32Q5T750 250 aa6.04□□□□□ -1.44
FIRRE-201ENST00000427391 K7ERS5 55 aa6.04□□□□□ -1.44
FIRRE-201ENST00000427391 H0YAA0 97 aa6.02□□□□□ -1.45
FIRRE-201ENST00000427391 LRP2P98164 4655 aa6.02□□□□□ -1.45
FIRRE-201ENST00000427391 MT1HL1P0DM35 61 aa6.02□□□□□ -1.45
FIRRE-201ENST00000427391 RPL37P61927 97 aaKnown RBP6.01□□□□□ -1.45
FIRRE-201ENST00000427391 NDUFAF8A1L188 74 aa6□□□□□ -1.45
FIRRE-201ENST00000427391 LCE2DQ5TA82 110 aaPredicted RBP5.99□□□□□ -1.45
FIRRE-201ENST00000427391 A0A1B0GU33 70 aa5.98□□□□□ -1.45
FIRRE-201ENST00000427391 H1FX-AS1Q4G0G2 97 aa5.95□□□□□ -1.46
FIRRE-201ENST00000427391 KRTAP3-3Q9BYR6 98 aa5.95□□□□□ -1.46
FIRRE-201ENST00000427391 KRTAP3-2Q9BYR7 98 aa5.95□□□□□ -1.46
FIRRE-201ENST00000427391 KRTAP10-6P60371 365 aaPredicted RBP5.86□□□□□ -1.47
FIRRE-201ENST00000427391 S4R3F8 94 aa5.86□□□□□ -1.47
FIRRE-201ENST00000427391 KRTAP13-4Q3LI77 160 aa5.85□□□□□ -1.47
FIRRE-201ENST00000427391 SPINT4Q6UDR6 99 aa5.84□□□□□ -1.48
FIRRE-201ENST00000427391 A0A0D9SG42 100 aa5.81□□□□□ -1.48
FIRRE-201ENST00000427391 TPRXLQ17RH7 258 aa5.78□□□□□ -1.48
FIRRE-201ENST00000427391 MUC2Q02817 5179 aa5.77□□□□□ -1.49
FIRRE-201ENST00000427391 CRIPTQ9P021 101 aa5.77□□□□□ -1.49
FIRRE-201ENST00000427391 UBR4Q5T4S7 5183 aa5.76□□□□□ -1.49
FIRRE-201ENST00000427391 RNF213Q63HN8 5207 aa5.75□□□□□ -1.49
FIRRE-201ENST00000427391 KRTAP15-1Q3LI76 137 aa5.71□□□□□ -1.5
FIRRE-201ENST00000427391 HMCN2Q8NDA2 5059 aa5.69□□□□□ -1.5
FIRRE-201ENST00000427391 MUC17Q685J3 4493 aa5.66□□□□□ -1.5
FIRRE-201ENST00000427391 KRTAP4-1Q9BYQ7 146 aa5.64□□□□□ -1.51
FIRRE-201ENST00000427391 CAMK2N1Q7Z7J9 78 aa5.63□□□□□ -1.51
FIRRE-201ENST00000427391 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
FIRRE-201ENST00000427391 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
FIRRE-201ENST00000427391 C10orf95Q9H7T3 257 aa5.54□□□□□ -1.52
FIRRE-201ENST00000427391 LORP23490 312 aaPredicted RBP5.51□□□□□ -1.53
FIRRE-201ENST00000427391 M0QZ58 72 aa5.5□□□□□ -1.53
FIRRE-201ENST00000427391 FAT4Q6V0I7 4981 aa5.47□□□□□ -1.53
FIRRE-201ENST00000427391 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
FIRRE-201ENST00000427391 R4GN34 69 aa5.45□□□□□ -1.54
FIRRE-201ENST00000427391 FLGP20930 4061 aaPredicted RBP5.36□□□□□ -1.55
FIRRE-201ENST00000427391 LCE2BO14633 110 aa5.25□□□□□ -1.57
FIRRE-201ENST00000427391 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.57
FIRRE-201ENST00000427391 LCE2CQ5TA81 110 aa5.21□□□□□ -1.58
FIRRE-201ENST00000427391 PRO2289Q9P1D8 64 aa5.18□□□□□ -1.58
FIRRE-201ENST00000427391 LCE2AQ5TA79 106 aaPredicted RBP5.16□□□□□ -1.58
FIRRE-201ENST00000427391 PLAC4Q8WY50 150 aa5.1□□□□□ -1.59
FIRRE-201ENST00000427391 M0R2T5 61 aa5.08□□□□□ -1.6
FIRRE-201ENST00000427391 MT1HP80294 61 aa5.04□□□□□ -1.6
FIRRE-201ENST00000427391 FSIP2Q5CZC0 6907 aa5.01□□□□□ -1.61
FIRRE-201ENST00000427391 KRTAP19-1Q8IUB9 90 aa5.01□□□□□ -1.61
FIRRE-201ENST00000427391 MT1FP04733 61 aa4.96□□□□□ -1.61
FIRRE-201ENST00000427391 SPRR2GQ9BYE4 73 aa4.96□□□□□ -1.62
FIRRE-201ENST00000427391 MT2AP02795 61 aa4.95□□□□□ -1.62
FIRRE-201ENST00000427391 KRTAP10-10P60014 251 aa4.95□□□□□ -1.62
FIRRE-201ENST00000427391 TNP1P09430 55 aa4.92□□□□□ -1.62
FIRRE-201ENST00000427391 KRTAP9-8Q9BYQ0 159 aa4.91□□□□□ -1.62
FIRRE-201ENST00000427391 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
FIRRE-201ENST00000427391 USH2AO75445 5202 aa4.88□□□□□ -1.63
FIRRE-201ENST00000427391 INE1O15225 51 aa4.85□□□□□ -1.63
FIRRE-201ENST00000427391 KRTAP9-6A0A140TA67 174 aa4.83□□□□□ -1.64
FIRRE-201ENST00000427391 MT1BP07438 61 aa4.76□□□□□ -1.65
FIRRE-201ENST00000427391 LCE3AQ5TA76 89 aa4.76□□□□□ -1.65
FIRRE-201ENST00000427391 KRTAP19-8Q3LI54 63 aa4.74□□□□□ -1.65
FIRRE-201ENST00000427391 KRTAP9-2Q9BYQ4 174 aa4.71□□□□□ -1.66
FIRRE-201ENST00000427391 KRTAP10-5P60370 271 aa4.7□□□□□ -1.66
FIRRE-201ENST00000427391 MT1XP80297 61 aa4.7□□□□□ -1.66
FIRRE-201ENST00000427391 KRTAP9-3Q9BYQ3 159 aa4.7□□□□□ -1.66
FIRRE-201ENST00000427391 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
FIRRE-201ENST00000427391 SPRR5A0A1B0GTR4 108 aa4.58□□□□□ -1.68
FIRRE-201ENST00000427391 SSPOA2VEC9 5147 aa4.57□□□□□ -1.68
FIRRE-201ENST00000427391 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
FIRRE-201ENST00000427391 KMT2DO14686 5537 aa4.56□□□□□ -1.68
FIRRE-201ENST00000427391 KRTAP8-1Q8IUC2 63 aa4.55□□□□□ -1.68
FIRRE-201ENST00000427391 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
FIRRE-201ENST00000427391 KRTAP4-8A0A0G2JLE6 195 aa4.39□□□□□ -1.71
FIRRE-201ENST00000427391 KRTAP4-8Q9BYQ9 185 aa4.39□□□□□ -1.71
FIRRE-201ENST00000427391 FCGBPQ9Y6R7 5405 aaPredicted RBP4.38□□□□□ -1.71
FIRRE-201ENST00000427391 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
FIRRE-201ENST00000427391 CRCT1Q9UGL9 99 aa4.37□□□□□ -1.71
FIRRE-201ENST00000427391 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
FIRRE-201ENST00000427391 SYNE2Q8WXH0 6885 aaKnown RBP4.28□□□□□ -1.72
FIRRE-201ENST00000427391 KRTAP9-7A8MTY7 169 aa4.23□□□□□ -1.73
FIRRE-201ENST00000427391 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
FIRRE-201ENST00000427391 KRTAP19-7Q3SYF9 63 aa4.19□□□□□ -1.74
FIRRE-201ENST00000427391 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms