RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 IGKV2D-30A0A075B6S6 120 aa7.92□□□□□ -1.14
COL11A1-204ENST00000427239 IGKV2-30P06310 120 aa7.92□□□□□ -1.14
COL11A1-204ENST00000427239 A8MUN3 132 aa7.91□□□□□ -1.14
COL11A1-204ENST00000427239 LINC00208Q96KT6 92 aa7.91□□□□□ -1.14
COL11A1-204ENST00000427239 H0Y9P7 68 aa7.89□□□□□ -1.15
COL11A1-204ENST00000427239 Q5VV11 94 aa7.89□□□□□ -1.15
COL11A1-204ENST00000427239 HRES1P13985 223 aa7.89□□□□□ -1.15
COL11A1-204ENST00000427239 LOC100996750A0A140TA64 210 aa7.88□□□□□ -1.15
COL11A1-204ENST00000427239 KRTAP4-6Q9BYQ5 205 aa7.88□□□□□ -1.15
COL11A1-204ENST00000427239 LOC101927531A0A1B0GV80 90 aa7.87□□□□□ -1.15
COL11A1-204ENST00000427239 RBM12B-AS1Q9P1G2 102 aa7.86□□□□□ -1.15
COL11A1-204ENST00000427239 CHKB-CPT1BH3BT56 60 aa7.83□□□□□ -1.16
COL11A1-204ENST00000427239 KRTAP19-2Q3LHN2 52 aa7.83□□□□□ -1.16
COL11A1-204ENST00000427239 COX6B2Q6YFQ2 88 aa7.83□□□□□ -1.16
COL11A1-204ENST00000427239 FAT4Q6V0I7 4981 aa7.82□□□□□ -1.16
COL11A1-204ENST00000427239 PRR15LQ9BU68 103 aa7.81□□□□□ -1.16
COL11A1-204ENST00000427239 KTN1-AS1Q86SY8 53 aa7.78□□□□□ -1.16
COL11A1-204ENST00000427239 COA5Q86WW8 74 aa7.78□□□□□ -1.16
COL11A1-204ENST00000427239 A6NED7 52 aa7.72□□□□□ -1.17
COL11A1-204ENST00000427239 CDC42SE1Q9NRR8 79 aa7.72□□□□□ -1.17
COL11A1-204ENST00000427239 A8MU10 97 aa7.71□□□□□ -1.18
COL11A1-204ENST00000427239 LINC01558Q9Y6Z2 57 aa7.71□□□□□ -1.18
COL11A1-204ENST00000427239 LCA10Q71F78 164 aa7.69□□□□□ -1.18
COL11A1-204ENST00000427239 SPTSSBQ8NFR3 76 aa7.69□□□□□ -1.18
COL11A1-204ENST00000427239 FLGP20930 4061 aaPredicted RBP7.68□□□□□ -1.18
COL11A1-204ENST00000427239 A6NN06 94 aa7.66□□□□□ -1.18
COL11A1-204ENST00000427239 MT1HP80294 61 aa7.66□□□□□ -1.18
COL11A1-204ENST00000427239 H1FX-AS1Q4G0G2 97 aa7.66□□□□□ -1.18
COL11A1-204ENST00000427239 KRTAP3-1Q9BYR8 98 aa7.63□□□□□ -1.19
COL11A1-204ENST00000427239 M0R2T5 61 aa7.59□□□□□ -1.19
COL11A1-204ENST00000427239 DMAC1Q96GE9 116 aa7.49□□□□□ -1.21
COL11A1-204ENST00000427239 S4R3F8 94 aa7.49□□□□□ -1.21
COL11A1-204ENST00000427239 ACYP2P14621 99 aa7.46□□□□□ -1.22
COL11A1-204ENST00000427239 KRTAP10-6P60371 365 aaPredicted RBP7.44□□□□□ -1.22
COL11A1-204ENST00000427239 CSAG1Q6PB30 78 aa7.41□□□□□ -1.22
COL11A1-204ENST00000427239 A0A1B0GU69 56 aa7.33□□□□□ -1.24
COL11A1-204ENST00000427239 KRTAP9-8Q9BYQ0 159 aa7.33□□□□□ -1.24
COL11A1-204ENST00000427239 SPATA8Q6RVD6 105 aa7.32□□□□□ -1.24
COL11A1-204ENST00000427239 KRTAP4-8Q9BYQ9 185 aa7.3□□□□□ -1.24
COL11A1-204ENST00000427239 UQCR11O14957 56 aa7.27□□□□□ -1.25
COL11A1-204ENST00000427239 MT2AP02795 61 aa7.26□□□□□ -1.25
COL11A1-204ENST00000427239 MIR22HGQ0VDD5 57 aa7.25□□□□□ -1.25
COL11A1-204ENST00000427239 PRAC1Q96KF2 57 aa7.24□□□□□ -1.25
COL11A1-204ENST00000427239 KRTAP10-10P60014 251 aa7.22□□□□□ -1.25
COL11A1-204ENST00000427239 LINC01554Q52M75 96 aa7.22□□□□□ -1.25
COL11A1-204ENST00000427239 H0YAA0 97 aa7.21□□□□□ -1.26
COL11A1-204ENST00000427239 MT1FP04733 61 aa7.2□□□□□ -1.26
COL11A1-204ENST00000427239 ADM2Q7Z4H4 148 aa7.17□□□□□ -1.26
COL11A1-204ENST00000427239 KRTAP9-2Q9BYQ4 174 aa7.14□□□□□ -1.27
COL11A1-204ENST00000427239 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.11□□□□□ -1.27
COL11A1-204ENST00000427239 KRTAP9-6A0A140TA67 174 aa7.1□□□□□ -1.27
COL11A1-204ENST00000427239 KRTAP9-3Q9BYQ3 159 aa7.09□□□□□ -1.27
COL11A1-204ENST00000427239 CRIPTQ9P021 101 aa7.05□□□□□ -1.28
COL11A1-204ENST00000427239 KRTAP4-12Q9BQ66 201 aa7.03□□□□□ -1.28
COL11A1-204ENST00000427239 P0C880 135 aa7□□□□□ -1.29
COL11A1-204ENST00000427239 LCE3BQ5TA77 95 aa6.99□□□□□ -1.29
COL11A1-204ENST00000427239 SPRR2GQ9BYE4 73 aa6.96□□□□□ -1.29
COL11A1-204ENST00000427239 KRTAP19-1Q8IUB9 90 aa6.95□□□□□ -1.3
COL11A1-204ENST00000427239 R4GN34 69 aa6.92□□□□□ -1.3
COL11A1-204ENST00000427239 H3BS24 57 aa6.91□□□□□ -1.3
COL11A1-204ENST00000427239 KRTAP25-1Q3LHN0 102 aa6.88□□□□□ -1.31
COL11A1-204ENST00000427239 FSIP2Q5CZC0 6907 aa6.86□□□□□ -1.31
COL11A1-204ENST00000427239 M0QZ58 72 aa6.86□□□□□ -1.31
COL11A1-204ENST00000427239 USH2AO75445 5202 aa6.85□□□□□ -1.31
COL11A1-204ENST00000427239 A0A1B0GU33 70 aa6.84□□□□□ -1.31
COL11A1-204ENST00000427239 KRTAP19-8Q3LI54 63 aa6.82□□□□□ -1.32
COL11A1-204ENST00000427239 K7ERS5 55 aa6.8□□□□□ -1.32
COL11A1-204ENST00000427239 KRTAP9-9Q9BYP9 154 aa6.79□□□□□ -1.32
COL11A1-204ENST00000427239 KRTAP9-4Q9BYQ2 154 aa6.79□□□□□ -1.32
COL11A1-204ENST00000427239 ROMO1P60602 79 aa6.75□□□□□ -1.33
COL11A1-204ENST00000427239 MT1BP07438 61 aa6.73□□□□□ -1.33
COL11A1-204ENST00000427239 CRCT1Q9UGL9 99 aa6.73□□□□□ -1.33
COL11A1-204ENST00000427239 KRTAP13-4Q3LI77 160 aa6.71□□□□□ -1.34
COL11A1-204ENST00000427239 SSPOA2VEC9 5147 aa6.69□□□□□ -1.34
COL11A1-204ENST00000427239 KRTAP4-8A0A0G2JLE6 195 aa6.67□□□□□ -1.34
COL11A1-204ENST00000427239 PLAC4Q8WY50 150 aa6.67□□□□□ -1.34
COL11A1-204ENST00000427239 KRTAP19-6Q3LI70 58 aa6.63□□□□□ -1.35
COL11A1-204ENST00000427239 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
COL11A1-204ENST00000427239 A0A0D9SG42 100 aa6.57□□□□□ -1.36
COL11A1-204ENST00000427239 LCE1DQ5T752 114 aa6.53□□□□□ -1.36
COL11A1-204ENST00000427239 KRTAP10-5P60370 271 aa6.5□□□□□ -1.37
COL11A1-204ENST00000427239 FCGBPQ9Y6R7 5405 aaPredicted RBP6.49□□□□□ -1.37
COL11A1-204ENST00000427239 PRO2289Q9P1D8 64 aa6.49□□□□□ -1.37
COL11A1-204ENST00000427239 KRTAP12-1P59990 96 aa6.46□□□□□ -1.38
COL11A1-204ENST00000427239 SPINT4Q6UDR6 99 aa6.46□□□□□ -1.38
COL11A1-204ENST00000427239 MT1XP80297 61 aa6.44□□□□□ -1.38
COL11A1-204ENST00000427239 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
COL11A1-204ENST00000427239 CAMK2N1Q7Z7J9 78 aa6.43□□□□□ -1.38
COL11A1-204ENST00000427239 KRTAP12-2P59991 146 aa6.41□□□□□ -1.38
COL11A1-204ENST00000427239 LCE4AQ5TA78 99 aa6.39□□□□□ -1.39
COL11A1-204ENST00000427239 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
COL11A1-204ENST00000427239 KRTAP4-9Q9BYQ8 210 aa6.31□□□□□ -1.4
COL11A1-204ENST00000427239 KRTAP9-7A8MTY7 169 aa6.29□□□□□ -1.4
COL11A1-204ENST00000427239 C10orf95Q9H7T3 257 aa6.29□□□□□ -1.4
COL11A1-204ENST00000427239 NDUFAF8A1L188 74 aa6.22□□□□□ -1.41
COL11A1-204ENST00000427239 MACF1Q9UPN3 7388 aaKnown RBP6.2□□□□□ -1.42
COL11A1-204ENST00000427239 KRTAP10-7P60409 375 aaPredicted RBP6.14□□□□□ -1.43
COL11A1-204ENST00000427239 KRTAP10-12P60413 245 aa6.13□□□□□ -1.43
COL11A1-204ENST00000427239 KRTAP4-2Q9BYR5 136 aa6.13□□□□□ -1.43
COL11A1-204ENST00000427239 LCE5AQ5TCM9 118 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms