RNA–Protein interactions for RNA: ENST00000425628.7

DHX40-202, Transcript of DEAH-box helicase 40, humanhuman

TSL 2 BASIC

Gene DHX40, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-202ENST00000425628 A6NED7 52 aa8.29□□□□□ -1.08
DHX40-202ENST00000425628 A0A1B0GU69 56 aa8.27□□□□□ -1.09
DHX40-202ENST00000425628 CDC42SE1Q9NRR8 79 aa8.26□□□□□ -1.09
DHX40-202ENST00000425628 LINC01554Q52M75 96 aa8.19□□□□□ -1.1
DHX40-202ENST00000425628 ABCA13Q86UQ4 5058 aa8.17□□□□□ -1.1
DHX40-202ENST00000425628 BIRC6Q9NR09 4857 aa8.14□□□□□ -1.11
DHX40-202ENST00000425628 J3QL48 77 aa8.14□□□□□ -1.11
DHX40-202ENST00000425628 HERC2O95714 4834 aa8.12□□□□□ -1.11
DHX40-202ENST00000425628 UQCR11O14957 56 aa8.07□□□□□ -1.12
DHX40-202ENST00000425628 LRP2P98164 4655 aa8.06□□□□□ -1.12
DHX40-202ENST00000425628 PRAC1Q96KF2 57 aa8.04□□□□□ -1.12
DHX40-202ENST00000425628 SPATA8Q6RVD6 105 aa8.04□□□□□ -1.12
DHX40-202ENST00000425628 S4R3F8 94 aa8.03□□□□□ -1.12
DHX40-202ENST00000425628 KRTAP3-3Q9BYR6 98 aa8.03□□□□□ -1.12
DHX40-202ENST00000425628 LPAP08519 4548 aa8.02□□□□□ -1.13
DHX40-202ENST00000425628 MIR22HGQ0VDD5 57 aa8.01□□□□□ -1.13
DHX40-202ENST00000425628 H1FX-AS1Q4G0G2 97 aa8□□□□□ -1.13
DHX40-202ENST00000425628 SEC61BP60468 96 aaKnown RBP8□□□□□ -1.13
DHX40-202ENST00000425628 A0A1B0GU33 70 aa7.92□□□□□ -1.14
DHX40-202ENST00000425628 ADM2Q7Z4H4 148 aa7.91□□□□□ -1.14
DHX40-202ENST00000425628 H0YAA0 97 aa7.87□□□□□ -1.15
DHX40-202ENST00000425628 KRTAP10-6P60371 365 aaPredicted RBP7.84□□□□□ -1.15
DHX40-202ENST00000425628 KRTAP4-1Q9BYQ7 146 aa7.83□□□□□ -1.16
DHX40-202ENST00000425628 KRTAP3-2Q9BYR7 98 aa7.82□□□□□ -1.16
DHX40-202ENST00000425628 MUC17Q685J3 4493 aa7.8□□□□□ -1.16
DHX40-202ENST00000425628 CSAG1Q6PB30 78 aa7.79□□□□□ -1.16
DHX40-202ENST00000425628 PCLOQ9Y6V0 5065 aa7.76□□□□□ -1.17
DHX40-202ENST00000425628 P0C880 135 aa7.72□□□□□ -1.17
DHX40-202ENST00000425628 KRTAP19-2Q3LHN2 52 aa7.68□□□□□ -1.18
DHX40-202ENST00000425628 KRTAP13-4Q3LI77 160 aa7.67□□□□□ -1.18
DHX40-202ENST00000425628 HMCN2Q8NDA2 5059 aa7.63□□□□□ -1.19
DHX40-202ENST00000425628 ROMO1P60602 79 aa7.62□□□□□ -1.19
DHX40-202ENST00000425628 HERC1Q15751 4861 aa7.62□□□□□ -1.19
DHX40-202ENST00000425628 A0A0A0MQY5 61 aa7.61□□□□□ -1.19
DHX40-202ENST00000425628 K7ERS5 55 aa7.58□□□□□ -1.2
DHX40-202ENST00000425628 A0A0D9SG42 100 aa7.54□□□□□ -1.2
DHX40-202ENST00000425628 M0QZ58 72 aa7.53□□□□□ -1.2
DHX40-202ENST00000425628 FLGP20930 4061 aaPredicted RBP7.45□□□□□ -1.22
DHX40-202ENST00000425628 KRTAP25-1Q3LHN0 102 aa7.45□□□□□ -1.22
DHX40-202ENST00000425628 MUC2Q02817 5179 aa7.41□□□□□ -1.22
DHX40-202ENST00000425628 KRTAP12-1P59990 96 aa7.4□□□□□ -1.23
DHX40-202ENST00000425628 KRTAP12-2P59991 146 aa7.4□□□□□ -1.23
DHX40-202ENST00000425628 R4GN34 69 aa7.4□□□□□ -1.23
DHX40-202ENST00000425628 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
DHX40-202ENST00000425628 LORP23490 312 aaPredicted RBP7.36□□□□□ -1.23
DHX40-202ENST00000425628 SPINT4Q6UDR6 99 aa7.34□□□□□ -1.23
DHX40-202ENST00000425628 RNF213Q63HN8 5207 aa7.28□□□□□ -1.24
DHX40-202ENST00000425628 UBR4Q5T4S7 5183 aa7.22□□□□□ -1.25
DHX40-202ENST00000425628 CRIPTQ9P021 101 aa7.22□□□□□ -1.25
DHX40-202ENST00000425628 MT1HP80294 61 aa7.19□□□□□ -1.26
DHX40-202ENST00000425628 NDUFAF8A1L188 74 aa7.14□□□□□ -1.27
DHX40-202ENST00000425628 M0R2T5 61 aa7.13□□□□□ -1.27
DHX40-202ENST00000425628 FAT4Q6V0I7 4981 aa7.11□□□□□ -1.27
DHX40-202ENST00000425628 SPRR2GQ9BYE4 73 aa7□□□□□ -1.29
DHX40-202ENST00000425628 MT2AP02795 61 aa6.99□□□□□ -1.29
DHX40-202ENST00000425628 C10orf95Q9H7T3 257 aa6.98□□□□□ -1.29
DHX40-202ENST00000425628 CAMK2N1Q7Z7J9 78 aa6.98□□□□□ -1.29
DHX40-202ENST00000425628 KRTAP9-8Q9BYQ0 159 aa6.97□□□□□ -1.29
DHX40-202ENST00000425628 KRTAP15-1Q3LI76 137 aa6.97□□□□□ -1.29
DHX40-202ENST00000425628 LUZP6Q538Z0 58 aa6.97□□□□□ -1.29
DHX40-202ENST00000425628 MT1FP04733 61 aa6.96□□□□□ -1.3
DHX40-202ENST00000425628 KRTAP19-1Q8IUB9 90 aa6.96□□□□□ -1.3
DHX40-202ENST00000425628 KRTAP10-10P60014 251 aa6.93□□□□□ -1.3
DHX40-202ENST00000425628 PLAC4Q8WY50 150 aa6.83□□□□□ -1.32
DHX40-202ENST00000425628 KRTAP19-8Q3LI54 63 aa6.78□□□□□ -1.32
DHX40-202ENST00000425628 KRTAP9-3Q9BYQ3 159 aa6.7□□□□□ -1.34
DHX40-202ENST00000425628 TNP1P09430 55 aa6.69□□□□□ -1.34
DHX40-202ENST00000425628 LCE2AQ5TA79 106 aaPredicted RBP6.67□□□□□ -1.34
DHX40-202ENST00000425628 PP632Q6XCG6 107 aa6.67□□□□□ -1.34
DHX40-202ENST00000425628 MT1BP07438 61 aa6.66□□□□□ -1.34
DHX40-202ENST00000425628 KRTAP23-1A1A580 65 aa6.59□□□□□ -1.35
DHX40-202ENST00000425628 KRTAP10-5P60370 271 aa6.52□□□□□ -1.37
DHX40-202ENST00000425628 MT1XP80297 61 aa6.52□□□□□ -1.37
DHX40-202ENST00000425628 LCE2BO14633 110 aa6.47□□□□□ -1.37
DHX40-202ENST00000425628 PRO2289Q9P1D8 64 aa6.38□□□□□ -1.39
DHX40-202ENST00000425628 LCE3AQ5TA76 89 aa6.37□□□□□ -1.39
DHX40-202ENST00000425628 KRTAP10-12P60413 245 aa6.28□□□□□ -1.4
DHX40-202ENST00000425628 KRTAP10-7P60409 375 aaPredicted RBP6.27□□□□□ -1.41
DHX40-202ENST00000425628 KRTAP8-1Q8IUC2 63 aa6.25□□□□□ -1.41
DHX40-202ENST00000425628 USH2AO75445 5202 aa6.21□□□□□ -1.42
DHX40-202ENST00000425628 KRTAP12-3P60328 96 aa6.1□□□□□ -1.43
DHX40-202ENST00000425628 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
DHX40-202ENST00000425628 SSPOA2VEC9 5147 aa6.02□□□□□ -1.45
DHX40-202ENST00000425628 KRTAP19-6Q3LI70 58 aa5.99□□□□□ -1.45
DHX40-202ENST00000425628 KRTAP19-5Q3LI72 72 aa5.96□□□□□ -1.45
DHX40-202ENST00000425628 KRTAP4-8A0A0G2JLE6 195 aa5.94□□□□□ -1.46
DHX40-202ENST00000425628 LCE2DQ5TA82 110 aaPredicted RBP5.94□□□□□ -1.46
DHX40-202ENST00000425628 KRTAP4-8Q9BYQ9 185 aa5.94□□□□□ -1.46
DHX40-202ENST00000425628 KMT2DO14686 5537 aa5.84□□□□□ -1.48
DHX40-202ENST00000425628 KRTAP19-7Q3SYF9 63 aa5.81□□□□□ -1.48
DHX40-202ENST00000425628 INE1O15225 51 aa5.78□□□□□ -1.48
DHX40-202ENST00000425628 FSIP2Q5CZC0 6907 aa5.73□□□□□ -1.49
DHX40-202ENST00000425628 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
DHX40-202ENST00000425628 MT1EP04732 61 aa5.69□□□□□ -1.5
DHX40-202ENST00000425628 FCGBPQ9Y6R7 5405 aaPredicted RBP5.64□□□□□ -1.51
DHX40-202ENST00000425628 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
DHX40-202ENST00000425628 MT1LQ93083 61 aa5.62□□□□□ -1.51
DHX40-202ENST00000425628 KRTAP9-2Q9BYQ4 174 aa5.53□□□□□ -1.52
DHX40-202ENST00000425628 KRTAP4-7Q9BYR0 210 aa5.49□□□□□ -1.53
DHX40-202ENST00000425628 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms