RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 K7ERU9 68 aa1.78□□□□□ -2.12
HDAC9-209ENST00000425071 ATP5EP2Q5VTU8 51 aa1.78□□□□□ -2.12
HDAC9-209ENST00000425071 PRR15Q8IV56 129 aa1.78□□□□□ -2.12
HDAC9-209ENST00000425071 C9orf92A6NGG3 77 aa1.77□□□□□ -2.13
HDAC9-209ENST00000425071 LINC00643Q86TS7 51 aa1.77□□□□□ -2.13
HDAC9-209ENST00000425071 LINC00846Q9NV44 126 aa1.77□□□□□ -2.13
HDAC9-209ENST00000425071 hDV103S1A0JD37 113 aa1.76□□□□□ -2.13
HDAC9-209ENST00000425071 RPL37P61927 97 aaKnown RBP1.76□□□□□ -2.13
HDAC9-209ENST00000425071 TMEM254Q8TBM7 123 aa1.76□□□□□ -2.13
HDAC9-209ENST00000425071 C20orf166-AS1Q96NR2 134 aa1.76□□□□□ -2.13
HDAC9-209ENST00000425071 TP53AIP1Q9HCN2 124 aa1.76□□□□□ -2.13
HDAC9-209ENST00000425071 HMCN2Q8NDA2 5059 aa1.75□□□□□ -2.13
HDAC9-209ENST00000425071 LRP2P98164 4655 aa1.75□□□□□ -2.13
HDAC9-209ENST00000425071 IGKV3D-7A0A0C4DH55 119 aa1.75□□□□□ -2.13
HDAC9-209ENST00000425071 P0C880 135 aa1.75□□□□□ -2.13
HDAC9-209ENST00000425071 CASC2Q6XLA1 102 aa1.75□□□□□ -2.13
HDAC9-209ENST00000425071 MRPL34Q9BQ48 92 aaKnown RBP1.75□□□□□ -2.13
HDAC9-209ENST00000425071 LPAP08519 4548 aa1.75□□□□□ -2.13
HDAC9-209ENST00000425071 HCG22E2RYF7 251 aa1.74□□□□□ -2.13
HDAC9-209ENST00000425071 NDUFS5O43920 106 aa1.74□□□□□ -2.13
HDAC9-209ENST00000425071 HIST1H4AP62805 103 aaKnown RBP1.74□□□□□ -2.13
HDAC9-209ENST00000425071 WFDC13Q8IUB5 93 aa1.74□□□□□ -2.13
HDAC9-209ENST00000425071 IMUPQ9GZP8 106 aa1.74□□□□□ -2.13
HDAC9-209ENST00000425071 SMIM26A0A096LP01 95 aa1.73□□□□□ -2.13
HDAC9-209ENST00000425071 K7EQZ3 153 aa1.73□□□□□ -2.13
HDAC9-209ENST00000425071 PCOTHQ58A44 107 aa1.73□□□□□ -2.13
HDAC9-209ENST00000425071 MUC17Q685J3 4493 aa1.73□□□□□ -2.13
HDAC9-209ENST00000425071 MMP24-AS1A0A0U1RRL7 71 aa1.72□□□□□ -2.13
HDAC9-209ENST00000425071 SCGB1A1P11684 91 aa1.72□□□□□ -2.13
HDAC9-209ENST00000425071 SMIM20Q8N5G0 67 aa1.72□□□□□ -2.13
HDAC9-209ENST00000425071 ZCCHC13Q8WW36 166 aaKnown RBP1.72□□□□□ -2.13
HDAC9-209ENST00000425071 RBM12B-AS1Q9P1G2 102 aa1.72□□□□□ -2.13
HDAC9-209ENST00000425071 ATOX1O00244 68 aa1.71□□□□□ -2.14
HDAC9-209ENST00000425071 UQCRQO14949 82 aa1.71□□□□□ -2.14
HDAC9-209ENST00000425071 KRTAP12-4P60329 112 aa1.71□□□□□ -2.14
HDAC9-209ENST00000425071 MP68P56378 58 aa1.7□□□□□ -2.14
HDAC9-209ENST00000425071 COX6B2Q6YFQ2 88 aa1.7□□□□□ -2.14
HDAC9-209ENST00000425071 UBR4Q5T4S7 5183 aa1.69□□□□□ -2.14
HDAC9-209ENST00000425071 H3BPC8 53 aa1.69□□□□□ -2.14
HDAC9-209ENST00000425071 SPINK7P58062 85 aa1.69□□□□□ -2.14
HDAC9-209ENST00000425071 C7orf65Q6ZTY9 151 aa1.69□□□□□ -2.14
HDAC9-209ENST00000425071 TRAV22A0A0B4J277 110 aa1.68□□□□□ -2.14
HDAC9-209ENST00000425071 FAM236DA0A1B0GTK5 79 aa1.68□□□□□ -2.14
HDAC9-209ENST00000425071 LOC101927531A0A1B0GV80 90 aa1.68□□□□□ -2.14
HDAC9-209ENST00000425071 FAM236CP0DP71 79 aa1.68□□□□□ -2.14
HDAC9-209ENST00000425071 KRTAP12-3P60328 96 aa1.68□□□□□ -2.14
HDAC9-209ENST00000425071 LUZP6Q538Z0 58 aa1.68□□□□□ -2.14
HDAC9-209ENST00000425071 MUC2Q02817 5179 aa1.68□□□□□ -2.14
HDAC9-209ENST00000425071 TRAV7A0A075B6U4 112 aa1.66□□□□□ -2.14
HDAC9-209ENST00000425071 H0Y9P7 68 aa1.66□□□□□ -2.14
HDAC9-209ENST00000425071 PSPHP1O15172 72 aa1.66□□□□□ -2.14
HDAC9-209ENST00000425071 ADM2Q7Z4H4 148 aa1.66□□□□□ -2.14
HDAC9-209ENST00000425071 A0A087WVE0 104 aa1.65□□□□□ -2.15
HDAC9-209ENST00000425071 A8MUN3 132 aa1.65□□□□□ -2.15
HDAC9-209ENST00000425071 M0R2T5 61 aa1.65□□□□□ -2.15
HDAC9-209ENST00000425071 MT-ATP8P03928 68 aa1.65□□□□□ -2.15
HDAC9-209ENST00000425071 KRTAP6-3Q3LI67 103 aa1.65□□□□□ -2.15
HDAC9-209ENST00000425071 LINC00208Q96KT6 92 aa1.65□□□□□ -2.15
HDAC9-209ENST00000425071 CYP4F30PQ9H0H9 118 aa1.65□□□□□ -2.15
HDAC9-209ENST00000425071 FLGP20930 4061 aaPredicted RBP1.65□□□□□ -2.15
HDAC9-209ENST00000425071 RNF213Q63HN8 5207 aa1.64□□□□□ -2.15
HDAC9-209ENST00000425071 FAM236AA0A1B0GUQ0 79 aa1.64□□□□□ -2.15
HDAC9-209ENST00000425071 FAM236BA0A1B0GV22 79 aa1.64□□□□□ -2.15
HDAC9-209ENST00000425071 HRES1P13985 223 aa1.64□□□□□ -2.15
HDAC9-209ENST00000425071 H1FX-AS1Q4G0G2 97 aa1.64□□□□□ -2.15
HDAC9-209ENST00000425071 NDUFC1O43677 76 aa1.63□□□□□ -2.15
HDAC9-209ENST00000425071 SERP2Q8N6R1 65 aa1.63□□□□□ -2.15
HDAC9-209ENST00000425071 KRTAP4-1Q9BYQ7 146 aa1.63□□□□□ -2.15
HDAC9-209ENST00000425071 C4orf26Q17RF5 130 aa1.62□□□□□ -2.15
HDAC9-209ENST00000425071 CSAG1Q6PB30 78 aa1.62□□□□□ -2.15
HDAC9-209ENST00000425071 ACYP2P14621 99 aa1.61□□□□□ -2.15
HDAC9-209ENST00000425071 SPTSSBQ8NFR3 76 aa1.61□□□□□ -2.15
HDAC9-209ENST00000425071 FAT4Q6V0I7 4981 aa1.6□□□□□ -2.15
HDAC9-209ENST00000425071 COX7CP15954 63 aa1.6□□□□□ -2.15
HDAC9-209ENST00000425071 R4GN34 69 aa1.6□□□□□ -2.15
HDAC9-209ENST00000425071 MT1HP80294 61 aa1.59□□□□□ -2.15
HDAC9-209ENST00000425071 KLKP1Q107X0 134 aa1.59□□□□□ -2.15
HDAC9-209ENST00000425071 KRTAP19-2Q3LHN2 52 aa1.59□□□□□ -2.15
HDAC9-209ENST00000425071 C20orf197Q8N268 126 aa1.59□□□□□ -2.15
HDAC9-209ENST00000425071 ANAPC13Q9BS18 74 aa1.59□□□□□ -2.15
HDAC9-209ENST00000425071 S4R3F8 94 aa1.59□□□□□ -2.15
HDAC9-209ENST00000425071 CHKB-CPT1BH3BT56 60 aa1.57□□□□□ -2.16
HDAC9-209ENST00000425071 DMAC1Q96GE9 116 aa1.57□□□□□ -2.16
HDAC9-209ENST00000425071 SNURFQ9Y675 71 aa1.57□□□□□ -2.16
HDAC9-209ENST00000425071 ATP5EP56381 51 aaPredicted RBP1.56□□□□□ -2.16
HDAC9-209ENST00000425071 CRIPTQ9P021 101 aa1.56□□□□□ -2.16
HDAC9-209ENST00000425071 H0YAA0 97 aa1.55□□□□□ -2.16
HDAC9-209ENST00000425071 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
HDAC9-209ENST00000425071 LCA10Q71F78 164 aa1.55□□□□□ -2.16
HDAC9-209ENST00000425071 H7BZZ5 65 aa1.53□□□□□ -2.16
HDAC9-209ENST00000425071 SERP1Q9Y6X1 66 aa1.53□□□□□ -2.16
HDAC9-209ENST00000425071 TMEM258P61165 79 aa1.52□□□□□ -2.17
HDAC9-209ENST00000425071 COA5Q86WW8 74 aa1.51□□□□□ -2.17
HDAC9-209ENST00000425071 CCDC179H3BU77 68 aa1.5□□□□□ -2.17
HDAC9-209ENST00000425071 M0QZ58 72 aa1.5□□□□□ -2.17
HDAC9-209ENST00000425071 MT2AP02795 61 aa1.5□□□□□ -2.17
HDAC9-209ENST00000425071 PRR15LQ9BU68 103 aa1.5□□□□□ -2.17
HDAC9-209ENST00000425071 V9GYY9 64 aa1.49□□□□□ -2.17
HDAC9-209ENST00000425071 A0A1B0GU69 56 aa1.47□□□□□ -2.17
HDAC9-209ENST00000425071 MT1FP04733 61 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms