RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 KRTAP3-3Q9BYR6 98 aa2.47□□□□□ -2.01
CKS1BP6-201ENST00000424932 LRP1Q07954 4544 aaKnown RBP2.47□□□□□ -2.01
CKS1BP6-201ENST00000424932 RBM12B-AS1Q9P1G2 102 aa2.46□□□□□ -2.02
CKS1BP6-201ENST00000424932 S4R3F8 94 aa2.46□□□□□ -2.02
CKS1BP6-201ENST00000424932 PCLOQ9Y6V0 5065 aa2.46□□□□□ -2.02
CKS1BP6-201ENST00000424932 UBR4Q5T4S7 5183 aa2.46□□□□□ -2.02
CKS1BP6-201ENST00000424932 RYR1P21817 5038 aa2.46□□□□□ -2.02
CKS1BP6-201ENST00000424932 BIRC6Q9NR09 4857 aa2.44□□□□□ -2.02
CKS1BP6-201ENST00000424932 RYR3Q15413 4870 aa2.44□□□□□ -2.02
CKS1BP6-201ENST00000424932 KRTAP10-6P60371 365 aaPredicted RBP2.44□□□□□ -2.02
CKS1BP6-201ENST00000424932 KRTAP3-2Q9BYR7 98 aa2.43□□□□□ -2.02
CKS1BP6-201ENST00000424932 KIAA1109Q2LD37 5005 aa2.41□□□□□ -2.02
CKS1BP6-201ENST00000424932 K7ERS5 55 aa2.41□□□□□ -2.02
CKS1BP6-201ENST00000424932 ADM2Q7Z4H4 148 aa2.41□□□□□ -2.02
CKS1BP6-201ENST00000424932 PRAC1Q96KF2 57 aa2.41□□□□□ -2.02
CKS1BP6-201ENST00000424932 MYCBP2O75592 4640 aa2.39□□□□□ -2.03
CKS1BP6-201ENST00000424932 SEC61BP60468 96 aaKnown RBP2.38□□□□□ -2.03
CKS1BP6-201ENST00000424932 KRTAP13-4Q3LI77 160 aa2.38□□□□□ -2.03
CKS1BP6-201ENST00000424932 CSAG1Q6PB30 78 aa2.38□□□□□ -2.03
CKS1BP6-201ENST00000424932 KRTAP4-5Q9BYR2 181 aa2.38□□□□□ -2.03
CKS1BP6-201ENST00000424932 KRTAP9-6A0A140TA67 174 aa2.37□□□□□ -2.03
CKS1BP6-201ENST00000424932 P0C880 135 aa2.37□□□□□ -2.03
CKS1BP6-201ENST00000424932 M0QZ58 72 aa2.36□□□□□ -2.03
CKS1BP6-201ENST00000424932 LINC01554Q52M75 96 aa2.36□□□□□ -2.03
CKS1BP6-201ENST00000424932 ROMO1P60602 79 aa2.34□□□□□ -2.03
CKS1BP6-201ENST00000424932 KRTAP25-1Q3LHN0 102 aa2.34□□□□□ -2.03
CKS1BP6-201ENST00000424932 EPPK1P58107 5090 aaKnown RBP2.33□□□□□ -2.04
CKS1BP6-201ENST00000424932 KRTAP12-1P59990 96 aa2.32□□□□□ -2.04
CKS1BP6-201ENST00000424932 LRP2P98164 4655 aa2.32□□□□□ -2.04
CKS1BP6-201ENST00000424932 A0A0D9SG42 100 aa2.31□□□□□ -2.04
CKS1BP6-201ENST00000424932 J3QL48 77 aa2.31□□□□□ -2.04
CKS1BP6-201ENST00000424932 KRTAP19-2Q3LHN2 52 aa2.31□□□□□ -2.04
CKS1BP6-201ENST00000424932 KRTAP12-2P59991 146 aa2.3□□□□□ -2.04
CKS1BP6-201ENST00000424932 KRTAP4-1Q9BYQ7 146 aa2.3□□□□□ -2.04
CKS1BP6-201ENST00000424932 MUC17Q685J3 4493 aa2.29□□□□□ -2.04
CKS1BP6-201ENST00000424932 LPAP08519 4548 aa2.27□□□□□ -2.05
CKS1BP6-201ENST00000424932 ABCA13Q86UQ4 5058 aa2.27□□□□□ -2.05
CKS1BP6-201ENST00000424932 R4GN34 69 aa2.25□□□□□ -2.05
CKS1BP6-201ENST00000424932 SPINT4Q6UDR6 99 aa2.24□□□□□ -2.05
CKS1BP6-201ENST00000424932 KRTAP9-2Q9BYQ4 174 aa2.24□□□□□ -2.05
CKS1BP6-201ENST00000424932 HERC2O95714 4834 aa2.24□□□□□ -2.05
CKS1BP6-201ENST00000424932 CRIPTQ9P021 101 aa2.23□□□□□ -2.05
CKS1BP6-201ENST00000424932 LORP23490 312 aaPredicted RBP2.21□□□□□ -2.06
CKS1BP6-201ENST00000424932 C10orf95Q9H7T3 257 aa2.19□□□□□ -2.06
CKS1BP6-201ENST00000424932 FLGP20930 4061 aaPredicted RBP2.18□□□□□ -2.06
CKS1BP6-201ENST00000424932 LCE2CQ5TA81 110 aa2.17□□□□□ -2.06
CKS1BP6-201ENST00000424932 PP632Q6XCG6 107 aa2.14□□□□□ -2.07
CKS1BP6-201ENST00000424932 KRTAP15-1Q3LI76 137 aa2.13□□□□□ -2.07
CKS1BP6-201ENST00000424932 CAMK2N1Q7Z7J9 78 aa2.13□□□□□ -2.07
CKS1BP6-201ENST00000424932 SPRR2GQ9BYE4 73 aa2.13□□□□□ -2.07
CKS1BP6-201ENST00000424932 HMCN2Q8NDA2 5059 aa2.12□□□□□ -2.07
CKS1BP6-201ENST00000424932 MUC2Q02817 5179 aa2.12□□□□□ -2.07
CKS1BP6-201ENST00000424932 KRTAP23-1A1A580 65 aa2.12□□□□□ -2.07
CKS1BP6-201ENST00000424932 HERC1Q15751 4861 aa2.11□□□□□ -2.07
CKS1BP6-201ENST00000424932 MT1HP80294 61 aa2.11□□□□□ -2.07
CKS1BP6-201ENST00000424932 KRTAP19-1Q8IUB9 90 aa2.09□□□□□ -2.07
CKS1BP6-201ENST00000424932 KRTAP9-7A8MTY7 169 aa2.07□□□□□ -2.08
CKS1BP6-201ENST00000424932 MT2AP02795 61 aa2.07□□□□□ -2.08
CKS1BP6-201ENST00000424932 TNP1P09430 55 aa2.07□□□□□ -2.08
CKS1BP6-201ENST00000424932 KRTAP19-8Q3LI54 63 aa2.06□□□□□ -2.08
CKS1BP6-201ENST00000424932 KRTAP9-8Q9BYQ0 159 aa2.06□□□□□ -2.08
CKS1BP6-201ENST00000424932 M0R2T5 61 aa2.05□□□□□ -2.08
CKS1BP6-201ENST00000424932 MT1FP04733 61 aa2.05□□□□□ -2.08
CKS1BP6-201ENST00000424932 PLAC4Q8WY50 150 aa2.05□□□□□ -2.08
CKS1BP6-201ENST00000424932 H3BS24 57 aa2.04□□□□□ -2.08
CKS1BP6-201ENST00000424932 RNF213Q63HN8 5207 aa2.02□□□□□ -2.09
CKS1BP6-201ENST00000424932 KRTAP10-10P60014 251 aa2.02□□□□□ -2.09
CKS1BP6-201ENST00000424932 CRCT1Q9UGL9 99 aa2.01□□□□□ -2.09
CKS1BP6-201ENST00000424932 NDUFAF8A1L188 74 aa2□□□□□ -2.09
CKS1BP6-201ENST00000424932 MT1BP07438 61 aa2□□□□□ -2.09
CKS1BP6-201ENST00000424932 SPRR5A0A1B0GTR4 108 aa1.99□□□□□ -2.09
CKS1BP6-201ENST00000424932 FAT4Q6V0I7 4981 aa1.97□□□□□ -2.09
CKS1BP6-201ENST00000424932 KRTAP10-5P60370 271 aa1.97□□□□□ -2.09
CKS1BP6-201ENST00000424932 MT1XP80297 61 aa1.97□□□□□ -2.09
CKS1BP6-201ENST00000424932 KRTAP9-3Q9BYQ3 159 aa1.97□□□□□ -2.09
CKS1BP6-201ENST00000424932 KRTAP8-1Q8IUC2 63 aa1.96□□□□□ -2.1
CKS1BP6-201ENST00000424932 LCE3AQ5TA76 89 aa1.95□□□□□ -2.1
CKS1BP6-201ENST00000424932 LUZP6Q538Z0 58 aa1.94□□□□□ -2.1
CKS1BP6-201ENST00000424932 LCE2AQ5TA79 106 aaPredicted RBP1.92□□□□□ -2.1
CKS1BP6-201ENST00000424932 PRO2289Q9P1D8 64 aa1.92□□□□□ -2.1
CKS1BP6-201ENST00000424932 KRTAP10-12P60413 245 aa1.91□□□□□ -2.1
CKS1BP6-201ENST00000424932 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.9□□□□□ -2.11
CKS1BP6-201ENST00000424932 FSIP2Q5CZC0 6907 aa1.89□□□□□ -2.11
CKS1BP6-201ENST00000424932 LCE2BO14633 110 aa1.88□□□□□ -2.11
CKS1BP6-201ENST00000424932 KRTAP12-3P60328 96 aa1.88□□□□□ -2.11
CKS1BP6-201ENST00000424932 KRTAP10-7P60409 375 aaPredicted RBP1.87□□□□□ -2.11
CKS1BP6-201ENST00000424932 A0A0A0MQY5 61 aa1.82□□□□□ -2.12
CKS1BP6-201ENST00000424932 KRTAP19-4Q3LI73 84 aa1.8□□□□□ -2.12
CKS1BP6-201ENST00000424932 KRTAP19-5Q3LI72 72 aa1.79□□□□□ -2.12
CKS1BP6-201ENST00000424932 LCE2DQ5TA82 110 aaPredicted RBP1.78□□□□□ -2.12
CKS1BP6-201ENST00000424932 KRTAP20-1Q3LI63 56 aa1.77□□□□□ -2.13
CKS1BP6-201ENST00000424932 LCE3CQ5T5A8 94 aa1.77□□□□□ -2.13
CKS1BP6-201ENST00000424932 KRTAP19-7Q3SYF9 63 aa1.76□□□□□ -2.13
CKS1BP6-201ENST00000424932 KRTAP19-6Q3LI70 58 aa1.75□□□□□ -2.13
CKS1BP6-201ENST00000424932 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
CKS1BP6-201ENST00000424932 KRTAP4-8A0A0G2JLE6 195 aa1.74□□□□□ -2.13
CKS1BP6-201ENST00000424932 KRTAP4-8Q9BYQ9 185 aa1.74□□□□□ -2.13
CKS1BP6-201ENST00000424932 USH2AO75445 5202 aa1.73□□□□□ -2.13
CKS1BP6-201ENST00000424932 NEBP20929 6669 aa1.73□□□□□ -2.13
CKS1BP6-201ENST00000424932 SSPOA2VEC9 5147 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms