RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 KRTAP3-3Q9BYR6 98 aa2.47□□□□□ -2.01
CKS1BP6-201ENST00000424932 LRP1Q07954 4544 aaKnown RBP2.47□□□□□ -2.01
CKS1BP6-201ENST00000424932 RBM12B-AS1Q9P1G2 102 aa2.46□□□□□ -2.02
CKS1BP6-201ENST00000424932 S4R3F8 94 aa2.46□□□□□ -2.02
CKS1BP6-201ENST00000424932 PCLOQ9Y6V0 5065 aa2.46□□□□□ -2.02
CKS1BP6-201ENST00000424932 UBR4Q5T4S7 5183 aa2.46□□□□□ -2.02
CKS1BP6-201ENST00000424932 RYR1P21817 5038 aa2.46□□□□□ -2.02
CKS1BP6-201ENST00000424932 BIRC6Q9NR09 4857 aa2.44□□□□□ -2.02
CKS1BP6-201ENST00000424932 RYR3Q15413 4870 aa2.44□□□□□ -2.02
CKS1BP6-201ENST00000424932 KRTAP10-6P60371 365 aaPredicted RBP2.44□□□□□ -2.02
CKS1BP6-201ENST00000424932 KRTAP3-2Q9BYR7 98 aa2.43□□□□□ -2.02
CKS1BP6-201ENST00000424932 KIAA1109Q2LD37 5005 aa2.41□□□□□ -2.02
CKS1BP6-201ENST00000424932 K7ERS5 55 aa2.41□□□□□ -2.02
CKS1BP6-201ENST00000424932 ADM2Q7Z4H4 148 aa2.41□□□□□ -2.02
CKS1BP6-201ENST00000424932 PRAC1Q96KF2 57 aa2.41□□□□□ -2.02
CKS1BP6-201ENST00000424932 MYCBP2O75592 4640 aa2.39□□□□□ -2.03
CKS1BP6-201ENST00000424932 SEC61BP60468 96 aaKnown RBP2.38□□□□□ -2.03
CKS1BP6-201ENST00000424932 KRTAP13-4Q3LI77 160 aa2.38□□□□□ -2.03
CKS1BP6-201ENST00000424932 CSAG1Q6PB30 78 aa2.38□□□□□ -2.03
CKS1BP6-201ENST00000424932 KRTAP4-5Q9BYR2 181 aa2.38□□□□□ -2.03
CKS1BP6-201ENST00000424932 KRTAP9-6A0A140TA67 174 aa2.37□□□□□ -2.03
CKS1BP6-201ENST00000424932 P0C880 135 aa2.37□□□□□ -2.03
CKS1BP6-201ENST00000424932 M0QZ58 72 aa2.36□□□□□ -2.03
CKS1BP6-201ENST00000424932 LINC01554Q52M75 96 aa2.36□□□□□ -2.03
CKS1BP6-201ENST00000424932 ROMO1P60602 79 aa2.34□□□□□ -2.03
CKS1BP6-201ENST00000424932 KRTAP25-1Q3LHN0 102 aa2.34□□□□□ -2.03
CKS1BP6-201ENST00000424932 EPPK1P58107 5090 aaKnown RBP2.33□□□□□ -2.04
CKS1BP6-201ENST00000424932 KRTAP12-1P59990 96 aa2.32□□□□□ -2.04
CKS1BP6-201ENST00000424932 LRP2P98164 4655 aa2.32□□□□□ -2.04
CKS1BP6-201ENST00000424932 A0A0D9SG42 100 aa2.31□□□□□ -2.04
CKS1BP6-201ENST00000424932 J3QL48 77 aa2.31□□□□□ -2.04
CKS1BP6-201ENST00000424932 KRTAP19-2Q3LHN2 52 aa2.31□□□□□ -2.04
CKS1BP6-201ENST00000424932 KRTAP12-2P59991 146 aa2.3□□□□□ -2.04
CKS1BP6-201ENST00000424932 KRTAP4-1Q9BYQ7 146 aa2.3□□□□□ -2.04
CKS1BP6-201ENST00000424932 MUC17Q685J3 4493 aa2.29□□□□□ -2.04
CKS1BP6-201ENST00000424932 LPAP08519 4548 aa2.27□□□□□ -2.05
CKS1BP6-201ENST00000424932 ABCA13Q86UQ4 5058 aa2.27□□□□□ -2.05
CKS1BP6-201ENST00000424932 R4GN34 69 aa2.25□□□□□ -2.05
CKS1BP6-201ENST00000424932 SPINT4Q6UDR6 99 aa2.24□□□□□ -2.05
CKS1BP6-201ENST00000424932 KRTAP9-2Q9BYQ4 174 aa2.24□□□□□ -2.05
CKS1BP6-201ENST00000424932 HERC2O95714 4834 aa2.24□□□□□ -2.05
CKS1BP6-201ENST00000424932 CRIPTQ9P021 101 aa2.23□□□□□ -2.05
CKS1BP6-201ENST00000424932 LORP23490 312 aaPredicted RBP2.21□□□□□ -2.06
CKS1BP6-201ENST00000424932 C10orf95Q9H7T3 257 aa2.19□□□□□ -2.06
CKS1BP6-201ENST00000424932 FLGP20930 4061 aaPredicted RBP2.18□□□□□ -2.06
CKS1BP6-201ENST00000424932 LCE2CQ5TA81 110 aa2.17□□□□□ -2.06
CKS1BP6-201ENST00000424932 PP632Q6XCG6 107 aa2.14□□□□□ -2.07
CKS1BP6-201ENST00000424932 KRTAP15-1Q3LI76 137 aa2.13□□□□□ -2.07
CKS1BP6-201ENST00000424932 CAMK2N1Q7Z7J9 78 aa2.13□□□□□ -2.07
CKS1BP6-201ENST00000424932 SPRR2GQ9BYE4 73 aa2.13□□□□□ -2.07
CKS1BP6-201ENST00000424932 HMCN2Q8NDA2 5059 aa2.12□□□□□ -2.07
CKS1BP6-201ENST00000424932 MUC2Q02817 5179 aa2.12□□□□□ -2.07
CKS1BP6-201ENST00000424932 KRTAP23-1A1A580 65 aa2.12□□□□□ -2.07
CKS1BP6-201ENST00000424932 HERC1Q15751 4861 aa2.11□□□□□ -2.07
CKS1BP6-201ENST00000424932 MT1HP80294 61 aa2.11□□□□□ -2.07
CKS1BP6-201ENST00000424932 KRTAP19-1Q8IUB9 90 aa2.09□□□□□ -2.07
CKS1BP6-201ENST00000424932 KRTAP9-7A8MTY7 169 aa2.07□□□□□ -2.08
CKS1BP6-201ENST00000424932 MT2AP02795 61 aa2.07□□□□□ -2.08
CKS1BP6-201ENST00000424932 TNP1P09430 55 aa2.07□□□□□ -2.08
CKS1BP6-201ENST00000424932 KRTAP19-8Q3LI54 63 aa2.06□□□□□ -2.08
CKS1BP6-201ENST00000424932 KRTAP9-8Q9BYQ0 159 aa2.06□□□□□ -2.08
CKS1BP6-201ENST00000424932 M0R2T5 61 aa2.05□□□□□ -2.08
CKS1BP6-201ENST00000424932 MT1FP04733 61 aa2.05□□□□□ -2.08
CKS1BP6-201ENST00000424932 PLAC4Q8WY50 150 aa2.05□□□□□ -2.08
CKS1BP6-201ENST00000424932 H3BS24 57 aa2.04□□□□□ -2.08
CKS1BP6-201ENST00000424932 RNF213Q63HN8 5207 aa2.02□□□□□ -2.09
CKS1BP6-201ENST00000424932 KRTAP10-10P60014 251 aa2.02□□□□□ -2.09
CKS1BP6-201ENST00000424932 CRCT1Q9UGL9 99 aa2.01□□□□□ -2.09
CKS1BP6-201ENST00000424932 NDUFAF8A1L188 74 aa2□□□□□ -2.09
CKS1BP6-201ENST00000424932 MT1BP07438 61 aa2□□□□□ -2.09
CKS1BP6-201ENST00000424932 SPRR5A0A1B0GTR4 108 aa1.99□□□□□ -2.09
CKS1BP6-201ENST00000424932 FAT4Q6V0I7 4981 aa1.97□□□□□ -2.09
CKS1BP6-201ENST00000424932 KRTAP10-5P60370 271 aa1.97□□□□□ -2.09
CKS1BP6-201ENST00000424932 MT1XP80297 61 aa1.97□□□□□ -2.09
CKS1BP6-201ENST00000424932 KRTAP9-3Q9BYQ3 159 aa1.97□□□□□ -2.09
CKS1BP6-201ENST00000424932 KRTAP8-1Q8IUC2 63 aa1.96□□□□□ -2.1
CKS1BP6-201ENST00000424932 LCE3AQ5TA76 89 aa1.95□□□□□ -2.1
CKS1BP6-201ENST00000424932 LUZP6Q538Z0 58 aa1.94□□□□□ -2.1
CKS1BP6-201ENST00000424932 LCE2AQ5TA79 106 aaPredicted RBP1.92□□□□□ -2.1
CKS1BP6-201ENST00000424932 PRO2289Q9P1D8 64 aa1.92□□□□□ -2.1
CKS1BP6-201ENST00000424932 KRTAP10-12P60413 245 aa1.91□□□□□ -2.1
CKS1BP6-201ENST00000424932 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.9□□□□□ -2.11
CKS1BP6-201ENST00000424932 FSIP2Q5CZC0 6907 aa1.89□□□□□ -2.11
CKS1BP6-201ENST00000424932 LCE2BO14633 110 aa1.88□□□□□ -2.11
CKS1BP6-201ENST00000424932 KRTAP12-3P60328 96 aa1.88□□□□□ -2.11
CKS1BP6-201ENST00000424932 KRTAP10-7P60409 375 aaPredicted RBP1.87□□□□□ -2.11
CKS1BP6-201ENST00000424932 A0A0A0MQY5 61 aa1.82□□□□□ -2.12
CKS1BP6-201ENST00000424932 KRTAP19-4Q3LI73 84 aa1.8□□□□□ -2.12
CKS1BP6-201ENST00000424932 KRTAP19-5Q3LI72 72 aa1.79□□□□□ -2.12
CKS1BP6-201ENST00000424932 LCE2DQ5TA82 110 aaPredicted RBP1.78□□□□□ -2.12
CKS1BP6-201ENST00000424932 KRTAP20-1Q3LI63 56 aa1.77□□□□□ -2.13
CKS1BP6-201ENST00000424932 LCE3CQ5T5A8 94 aa1.77□□□□□ -2.13
CKS1BP6-201ENST00000424932 KRTAP19-7Q3SYF9 63 aa1.76□□□□□ -2.13
CKS1BP6-201ENST00000424932 KRTAP19-6Q3LI70 58 aa1.75□□□□□ -2.13
CKS1BP6-201ENST00000424932 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
CKS1BP6-201ENST00000424932 KRTAP4-8A0A0G2JLE6 195 aa1.74□□□□□ -2.13
CKS1BP6-201ENST00000424932 KRTAP4-8Q9BYQ9 185 aa1.74□□□□□ -2.13
CKS1BP6-201ENST00000424932 USH2AO75445 5202 aa1.73□□□□□ -2.13
CKS1BP6-201ENST00000424932 NEBP20929 6669 aa1.73□□□□□ -2.13
CKS1BP6-201ENST00000424932 SSPOA2VEC9 5147 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms