RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 S4R3F8 94 aa7.83□□□□□ -1.16
ABCA1-203ENST00000423487 FLGP20930 4061 aaPredicted RBP7.82□□□□□ -1.16
ABCA1-203ENST00000423487 TMEM258P61165 79 aa7.78□□□□□ -1.16
ABCA1-203ENST00000423487 M0R2T5 61 aa7.78□□□□□ -1.16
ABCA1-203ENST00000423487 ATP5EP56381 51 aaPredicted RBP7.78□□□□□ -1.16
ABCA1-203ENST00000423487 LCA10Q71F78 164 aa7.77□□□□□ -1.17
ABCA1-203ENST00000423487 LCE2AQ5TA79 106 aaPredicted RBP7.75□□□□□ -1.17
ABCA1-203ENST00000423487 CHKB-CPT1BH3BT56 60 aa7.72□□□□□ -1.17
ABCA1-203ENST00000423487 CSAG1Q6PB30 78 aa7.7□□□□□ -1.18
ABCA1-203ENST00000423487 COA5Q86WW8 74 aa7.69□□□□□ -1.18
ABCA1-203ENST00000423487 SPTSSBQ8NFR3 76 aa7.65□□□□□ -1.18
ABCA1-203ENST00000423487 KRTAP10-6P60371 365 aaPredicted RBP7.61□□□□□ -1.19
ABCA1-203ENST00000423487 LORP23490 312 aaPredicted RBP7.57□□□□□ -1.2
ABCA1-203ENST00000423487 SERP1Q9Y6X1 66 aa7.54□□□□□ -1.2
ABCA1-203ENST00000423487 LCE2BO14633 110 aa7.53□□□□□ -1.2
ABCA1-203ENST00000423487 KRTAP9-8Q9BYQ0 159 aa7.5□□□□□ -1.21
ABCA1-203ENST00000423487 H0YAA0 97 aa7.49□□□□□ -1.21
ABCA1-203ENST00000423487 MT2AP02795 61 aa7.46□□□□□ -1.22
ABCA1-203ENST00000423487 ADM2Q7Z4H4 148 aa7.42□□□□□ -1.22
ABCA1-203ENST00000423487 KRTAP10-10P60014 251 aa7.41□□□□□ -1.22
ABCA1-203ENST00000423487 MT1FP04733 61 aa7.4□□□□□ -1.22
ABCA1-203ENST00000423487 RPS28P62857 69 aaKnown RBP7.38□□□□□ -1.23
ABCA1-203ENST00000423487 SEC61GP60059 68 aa7.37□□□□□ -1.23
ABCA1-203ENST00000423487 P0C880 135 aa7.32□□□□□ -1.24
ABCA1-203ENST00000423487 SMIM26A0A096LP01 95 aa7.31□□□□□ -1.24
ABCA1-203ENST00000423487 A0A1B0GU69 56 aa7.3□□□□□ -1.24
ABCA1-203ENST00000423487 CRIPTQ9P021 101 aa7.3□□□□□ -1.24
ABCA1-203ENST00000423487 LINC01558Q9Y6Z2 57 aa7.3□□□□□ -1.24
ABCA1-203ENST00000423487 V9GYY9 64 aa7.27□□□□□ -1.25
ABCA1-203ENST00000423487 PRR15LQ9BU68 103 aa7.26□□□□□ -1.25
ABCA1-203ENST00000423487 KRTAP9-3Q9BYQ3 159 aa7.25□□□□□ -1.25
ABCA1-203ENST00000423487 Q1T7F1 81 aa7.22□□□□□ -1.25
ABCA1-203ENST00000423487 R4GN34 69 aa7.21□□□□□ -1.26
ABCA1-203ENST00000423487 M0QZ58 72 aa7.17□□□□□ -1.26
ABCA1-203ENST00000423487 SPRR2GQ9BYE4 73 aa7.17□□□□□ -1.26
ABCA1-203ENST00000423487 A0A1B0GU33 70 aa7.17□□□□□ -1.26
ABCA1-203ENST00000423487 KRTAP19-1Q8IUB9 90 aa7.16□□□□□ -1.26
ABCA1-203ENST00000423487 PSPHP1O15172 72 aa7.11□□□□□ -1.27
ABCA1-203ENST00000423487 Q5VV11 94 aa7.07□□□□□ -1.28
ABCA1-203ENST00000423487 KRTAP13-4Q3LI77 160 aa7.06□□□□□ -1.28
ABCA1-203ENST00000423487 LINC01554Q52M75 96 aa7.04□□□□□ -1.28
ABCA1-203ENST00000423487 KRTAP9-2Q9BYQ4 174 aa7.04□□□□□ -1.28
ABCA1-203ENST00000423487 KRTAP19-8Q3LI54 63 aa7.03□□□□□ -1.28
ABCA1-203ENST00000423487 SPATA8Q6RVD6 105 aa7.03□□□□□ -1.28
ABCA1-203ENST00000423487 UQCR11O14957 56 aa7.02□□□□□ -1.29
ABCA1-203ENST00000423487 USH2AO75445 5202 aa6.94□□□□□ -1.3
ABCA1-203ENST00000423487 MT1BP07438 61 aa6.94□□□□□ -1.3
ABCA1-203ENST00000423487 A0A0D9SG42 100 aa6.93□□□□□ -1.3
ABCA1-203ENST00000423487 A6NN06 94 aa6.93□□□□□ -1.3
ABCA1-203ENST00000423487 MIR22HGQ0VDD5 57 aa6.91□□□□□ -1.3
ABCA1-203ENST00000423487 A6NED7 52 aa6.91□□□□□ -1.3
ABCA1-203ENST00000423487 PLAC4Q8WY50 150 aa6.91□□□□□ -1.3
ABCA1-203ENST00000423487 A8MU10 97 aa6.88□□□□□ -1.31
ABCA1-203ENST00000423487 LOC100996750A0A140TA64 210 aa6.83□□□□□ -1.32
ABCA1-203ENST00000423487 KRTAP4-6Q9BYQ5 205 aa6.83□□□□□ -1.32
ABCA1-203ENST00000423487 SPINT4Q6UDR6 99 aa6.81□□□□□ -1.32
ABCA1-203ENST00000423487 FSIP2Q5CZC0 6907 aa6.81□□□□□ -1.32
ABCA1-203ENST00000423487 KRTAP9-6A0A140TA67 174 aa6.8□□□□□ -1.32
ABCA1-203ENST00000423487 KRTAP12-1P59990 96 aa6.8□□□□□ -1.32
ABCA1-203ENST00000423487 SSPOA2VEC9 5147 aa6.79□□□□□ -1.32
ABCA1-203ENST00000423487 KRTAP12-2P59991 146 aa6.76□□□□□ -1.33
ABCA1-203ENST00000423487 KRTAP19-6Q3LI70 58 aa6.76□□□□□ -1.33
ABCA1-203ENST00000423487 CRCT1Q9UGL9 99 aa6.76□□□□□ -1.33
ABCA1-203ENST00000423487 CDC42SE1Q9NRR8 79 aa6.74□□□□□ -1.33
ABCA1-203ENST00000423487 CAMK2N1Q7Z7J9 78 aa6.72□□□□□ -1.33
ABCA1-203ENST00000423487 K7ERS5 55 aa6.7□□□□□ -1.34
ABCA1-203ENST00000423487 PRO2289Q9P1D8 64 aa6.68□□□□□ -1.34
ABCA1-203ENST00000423487 KRTAP10-5P60370 271 aa6.67□□□□□ -1.34
ABCA1-203ENST00000423487 MT1XP80297 61 aa6.65□□□□□ -1.35
ABCA1-203ENST00000423487 BRK1Q8WUW1 75 aa6.6□□□□□ -1.35
ABCA1-203ENST00000423487 FCGBPQ9Y6R7 5405 aaPredicted RBP6.52□□□□□ -1.37
ABCA1-203ENST00000423487 PRO0628Q9UI54 55 aa6.5□□□□□ -1.37
ABCA1-203ENST00000423487 C10orf95Q9H7T3 257 aa6.45□□□□□ -1.38
ABCA1-203ENST00000423487 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
ABCA1-203ENST00000423487 TNP1P09430 55 aa6.35□□□□□ -1.39
ABCA1-203ENST00000423487 KRTAP10-12P60413 245 aa6.33□□□□□ -1.4
ABCA1-203ENST00000423487 ROMO1P60602 79 aa6.33□□□□□ -1.4
ABCA1-203ENST00000423487 KRTAP25-1Q3LHN0 102 aa6.27□□□□□ -1.41
ABCA1-203ENST00000423487 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.25□□□□□ -1.41
ABCA1-203ENST00000423487 PMAIP1Q13794 54 aa6.24□□□□□ -1.41
ABCA1-203ENST00000423487 MACF1Q9UPN3 7388 aaKnown RBP6.22□□□□□ -1.41
ABCA1-203ENST00000423487 KRTAP4-8Q9BYQ9 185 aa6.21□□□□□ -1.42
ABCA1-203ENST00000423487 KRTAP4-8A0A0G2JLE6 195 aa6.18□□□□□ -1.42
ABCA1-203ENST00000423487 KRTAP8-1Q8IUC2 63 aa6.14□□□□□ -1.43
ABCA1-203ENST00000423487 KMT2DO14686 5537 aa6.12□□□□□ -1.43
ABCA1-203ENST00000423487 KRTAP9-7A8MTY7 169 aa6.11□□□□□ -1.43
ABCA1-203ENST00000423487 LCE3AQ5TA76 89 aa6.09□□□□□ -1.43
ABCA1-203ENST00000423487 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
ABCA1-203ENST00000423487 SYNE2Q8WXH0 6885 aaKnown RBP6.06□□□□□ -1.44
ABCA1-203ENST00000423487 KRTAP6-3Q3LI67 103 aa6.04□□□□□ -1.44
ABCA1-203ENST00000423487 PP632Q6XCG6 107 aa6□□□□□ -1.45
ABCA1-203ENST00000423487 KRTAP5-9P26371 169 aa5.99□□□□□ -1.45
ABCA1-203ENST00000423487 SPRR2FQ96RM1 72 aa5.96□□□□□ -1.46
ABCA1-203ENST00000423487 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
ABCA1-203ENST00000423487 KRTAP19-7Q3SYF9 63 aa5.94□□□□□ -1.46
ABCA1-203ENST00000423487 KTN1-AS1Q86SY8 53 aa5.93□□□□□ -1.46
ABCA1-203ENST00000423487 LCE3BQ5TA77 95 aa5.89□□□□□ -1.47
ABCA1-203ENST00000423487 KRTAP4-12Q9BQ66 201 aa5.89□□□□□ -1.47
ABCA1-203ENST00000423487 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
ABCA1-203ENST00000423487 MT1EP04732 61 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms