RNA–Protein interactions for RNA: ENST00000423041.6

PAPD4-202, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAPD4, Length 3,223 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-202ENST00000423041 KRTAP3-2Q9BYR7 98 aa4.98□□□□□ -1.61
PAPD4-202ENST00000423041 DNAH5Q8TE73 4624 aa4.96□□□□□ -1.62
PAPD4-202ENST00000423041 LRP1BQ9NZR2 4599 aa4.95□□□□□ -1.62
PAPD4-202ENST00000423041 PKD1P98161 4303 aa4.94□□□□□ -1.62
PAPD4-202ENST00000423041 DYNC1H1Q14204 4646 aaKnown RBP4.94□□□□□ -1.62
PAPD4-202ENST00000423041 EPPK1P58107 5090 aaKnown RBP4.93□□□□□ -1.62
PAPD4-202ENST00000423041 KRTAP3-1Q9BYR8 98 aa4.91□□□□□ -1.62
PAPD4-202ENST00000423041 KIAA1109Q2LD37 5005 aa4.91□□□□□ -1.62
PAPD4-202ENST00000423041 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.63
PAPD4-202ENST00000423041 FAT1Q14517 4588 aa4.89□□□□□ -1.63
PAPD4-202ENST00000423041 S4R3F8 94 aa4.89□□□□□ -1.63
PAPD4-202ENST00000423041 Q5VSD8 79 aa4.88□□□□□ -1.63
PAPD4-202ENST00000423041 PLAC4Q8WY50 150 aa4.85□□□□□ -1.63
PAPD4-202ENST00000423041 DNAH8Q96JB1 4490 aa4.85□□□□□ -1.63
PAPD4-202ENST00000423041 KRTAP10-6P60371 365 aaPredicted RBP4.84□□□□□ -1.63
PAPD4-202ENST00000423041 APOBP04114 4563 aaKnown RBP4.84□□□□□ -1.64
PAPD4-202ENST00000423041 XP32Q5T750 250 aa4.84□□□□□ -1.64
PAPD4-202ENST00000423041 VPS13BQ7Z7G8 4022 aa4.82□□□□□ -1.64
PAPD4-202ENST00000423041 KRTAP12-2P59991 146 aa4.82□□□□□ -1.64
PAPD4-202ENST00000423041 CAMK2N1Q7Z7J9 78 aa4.81□□□□□ -1.64
PAPD4-202ENST00000423041 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
PAPD4-202ENST00000423041 KRTAP17-1Q9BYP8 105 aa4.78□□□□□ -1.64
PAPD4-202ENST00000423041 RYR1P21817 5038 aa4.78□□□□□ -1.64
PAPD4-202ENST00000423041 KRTAP4-5Q9BYR2 181 aa4.78□□□□□ -1.64
PAPD4-202ENST00000423041 HSPG2P98160 4391 aa4.77□□□□□ -1.65
PAPD4-202ENST00000423041 KRTAP10-4P60372 401 aaPredicted RBP4.74□□□□□ -1.65
PAPD4-202ENST00000423041 BIRC6Q9NR09 4857 aa4.73□□□□□ -1.65
PAPD4-202ENST00000423041 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
PAPD4-202ENST00000423041 KRTAP1-4P0C5Y4 121 aa4.72□□□□□ -1.65
PAPD4-202ENST00000423041 MYCBP2O75592 4640 aa4.72□□□□□ -1.65
PAPD4-202ENST00000423041 LRP1Q07954 4544 aaKnown RBP4.7□□□□□ -1.66
PAPD4-202ENST00000423041 C9orf92A6NGG3 77 aa4.67□□□□□ -1.66
PAPD4-202ENST00000423041 HERC2O95714 4834 aa4.65□□□□□ -1.66
PAPD4-202ENST00000423041 ABCA13Q86UQ4 5058 aa4.64□□□□□ -1.67
PAPD4-202ENST00000423041 PRO2289Q9P1D8 64 aa4.61□□□□□ -1.67
PAPD4-202ENST00000423041 KRTAP10-8P60410 259 aa4.6□□□□□ -1.67
PAPD4-202ENST00000423041 LCE2CQ5TA81 110 aa4.58□□□□□ -1.68
PAPD4-202ENST00000423041 MT1HL1P0DM35 61 aa4.57□□□□□ -1.68
PAPD4-202ENST00000423041 PCLOQ9Y6V0 5065 aa4.56□□□□□ -1.68
PAPD4-202ENST00000423041 FAT3Q8TDW7 4589 aa4.54□□□□□ -1.68
PAPD4-202ENST00000423041 PKHD1L1Q86WI1 4243 aa4.53□□□□□ -1.69
PAPD4-202ENST00000423041 M0QZ58 72 aa4.52□□□□□ -1.69
PAPD4-202ENST00000423041 LCE2BO14633 110 aa4.51□□□□□ -1.69
PAPD4-202ENST00000423041 RPS29P62273 56 aaKnown RBP4.49□□□□□ -1.69
PAPD4-202ENST00000423041 LCE2AQ5TA79 106 aaPredicted RBP4.48□□□□□ -1.69
PAPD4-202ENST00000423041 R4GN34 69 aa4.48□□□□□ -1.69
PAPD4-202ENST00000423041 HERC1Q15751 4861 aa4.47□□□□□ -1.69
PAPD4-202ENST00000423041 TNXBP22105 4242 aa4.47□□□□□ -1.69
PAPD4-202ENST00000423041 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
PAPD4-202ENST00000423041 INE1O15225 51 aa4.38□□□□□ -1.71
PAPD4-202ENST00000423041 LRP2P98164 4655 aa4.37□□□□□ -1.71
PAPD4-202ENST00000423041 LPAP08519 4548 aa4.37□□□□□ -1.71
PAPD4-202ENST00000423041 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
PAPD4-202ENST00000423041 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
PAPD4-202ENST00000423041 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
PAPD4-202ENST00000423041 HMCN2Q8NDA2 5059 aa4.25□□□□□ -1.73
PAPD4-202ENST00000423041 UBR4Q5T4S7 5183 aa4.23□□□□□ -1.73
PAPD4-202ENST00000423041 MUC2Q02817 5179 aa4.23□□□□□ -1.73
PAPD4-202ENST00000423041 RNF213Q63HN8 5207 aa4.21□□□□□ -1.74
PAPD4-202ENST00000423041 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
PAPD4-202ENST00000423041 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
PAPD4-202ENST00000423041 TNP1P09430 55 aa4.09□□□□□ -1.75
PAPD4-202ENST00000423041 LORP23490 312 aaPredicted RBP4.08□□□□□ -1.76
PAPD4-202ENST00000423041 FAT4Q6V0I7 4981 aa4.04□□□□□ -1.76
PAPD4-202ENST00000423041 M0R2T5 61 aa4.04□□□□□ -1.76
PAPD4-202ENST00000423041 MUC17Q685J3 4493 aa3.96□□□□□ -1.77
PAPD4-202ENST00000423041 KRTAP19-2Q3LHN2 52 aa3.9□□□□□ -1.78
PAPD4-202ENST00000423041 MT1HP80294 61 aa3.87□□□□□ -1.79
PAPD4-202ENST00000423041 FLGP20930 4061 aaPredicted RBP3.83□□□□□ -1.8
PAPD4-202ENST00000423041 KRTAP4-8Q9BYQ9 185 aa3.81□□□□□ -1.8
PAPD4-202ENST00000423041 KRTAP10-10P60014 251 aa3.78□□□□□ -1.8
PAPD4-202ENST00000423041 LCE3AQ5TA76 89 aa3.77□□□□□ -1.81
PAPD4-202ENST00000423041 FSIP2Q5CZC0 6907 aa3.72□□□□□ -1.81
PAPD4-202ENST00000423041 MT2AP02795 61 aa3.7□□□□□ -1.82
PAPD4-202ENST00000423041 MT1FP04733 61 aa3.68□□□□□ -1.82
PAPD4-202ENST00000423041 KRTAP9-8Q9BYQ0 159 aa3.68□□□□□ -1.82
PAPD4-202ENST00000423041 KRTAP9-2Q9BYQ4 174 aa3.66□□□□□ -1.82
PAPD4-202ENST00000423041 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.66□□□□□ -1.82
PAPD4-202ENST00000423041 KRTAP9-6A0A140TA67 174 aa3.64□□□□□ -1.83
PAPD4-202ENST00000423041 KRTAP8-1Q8IUC2 63 aa3.63□□□□□ -1.83
PAPD4-202ENST00000423041 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
PAPD4-202ENST00000423041 USH2AO75445 5202 aa3.57□□□□□ -1.84
PAPD4-202ENST00000423041 KRTAP4-8A0A0G2JLE6 195 aa3.57□□□□□ -1.84
PAPD4-202ENST00000423041 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
PAPD4-202ENST00000423041 KRTAP9-3Q9BYQ3 159 aa3.55□□□□□ -1.84
PAPD4-202ENST00000423041 KRTAP19-1Q8IUB9 90 aa3.54□□□□□ -1.84
PAPD4-202ENST00000423041 SPRR2GQ9BYE4 73 aa3.5□□□□□ -1.85
PAPD4-202ENST00000423041 KRTAP4-7Q9BYR0 210 aa3.49□□□□□ -1.85
PAPD4-202ENST00000423041 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
PAPD4-202ENST00000423041 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
PAPD4-202ENST00000423041 KRTAP9-4Q9BYQ2 154 aa3.49□□□□□ -1.85
PAPD4-202ENST00000423041 LCE3BQ5TA77 95 aa3.48□□□□□ -1.85
PAPD4-202ENST00000423041 KRTAP10-5P60370 271 aa3.44□□□□□ -1.86
PAPD4-202ENST00000423041 MT1BP07438 61 aa3.42□□□□□ -1.86
PAPD4-202ENST00000423041 KRTAP19-8Q3LI54 63 aa3.4□□□□□ -1.87
PAPD4-202ENST00000423041 SSPOA2VEC9 5147 aa3.39□□□□□ -1.87
PAPD4-202ENST00000423041 KRTAP2-3P0C7H8 128 aa3.38□□□□□ -1.87
PAPD4-202ENST00000423041 KRTAP2-4Q9BYR9 128 aa3.38□□□□□ -1.87
PAPD4-202ENST00000423041 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
PAPD4-202ENST00000423041 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms