RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 TP53AIP1Q9HCN2 124 aa4.55□□□□□ -1.68
TRIM43CP-201ENST00000422468 H0Y9P7 68 aa4.54□□□□□ -1.68
TRIM43CP-201ENST00000422468 BRK1Q8WUW1 75 aa4.54□□□□□ -1.68
TRIM43CP-201ENST00000422468 LINC00208Q96KT6 92 aa4.53□□□□□ -1.68
TRIM43CP-201ENST00000422468 KRTAP4-1Q9BYQ7 146 aa4.53□□□□□ -1.68
TRIM43CP-201ENST00000422468 MMP24-AS1A0A0U1RRL7 71 aa4.51□□□□□ -1.69
TRIM43CP-201ENST00000422468 DEFB116Q30KQ4 102 aa4.5□□□□□ -1.69
TRIM43CP-201ENST00000422468 Q96NJ1 140 aa4.47□□□□□ -1.69
TRIM43CP-201ENST00000422468 C9orf92A6NGG3 77 aa4.46□□□□□ -1.7
TRIM43CP-201ENST00000422468 Q8N9P0 234 aaPredicted RBP4.46□□□□□ -1.7
TRIM43CP-201ENST00000422468 C8orf17Q9NRJ1 99 aa4.46□□□□□ -1.7
TRIM43CP-201ENST00000422468 A0A1B0GVX0 72 aa4.45□□□□□ -1.7
TRIM43CP-201ENST00000422468 LOC101927531A0A1B0GV80 90 aa4.44□□□□□ -1.7
TRIM43CP-201ENST00000422468 PCOTHQ58A44 107 aa4.43□□□□□ -1.7
TRIM43CP-201ENST00000422468 Q5VV11 94 aa4.43□□□□□ -1.7
TRIM43CP-201ENST00000422468 Q75L30 129 aa4.43□□□□□ -1.7
TRIM43CP-201ENST00000422468 COA5Q86WW8 74 aa4.43□□□□□ -1.7
TRIM43CP-201ENST00000422468 A8MUN3 132 aa4.42□□□□□ -1.7
TRIM43CP-201ENST00000422468 PSPHP1O15172 72 aa4.42□□□□□ -1.7
TRIM43CP-201ENST00000422468 KRTAP19-2Q3LHN2 52 aa4.42□□□□□ -1.7
TRIM43CP-201ENST00000422468 MRPL34Q9BQ48 92 aaKnown RBP4.42□□□□□ -1.7
TRIM43CP-201ENST00000422468 LINC01558Q9Y6Z2 57 aa4.41□□□□□ -1.7
TRIM43CP-201ENST00000422468 C8orf87E5RJ46 101 aa4.4□□□□□ -1.71
TRIM43CP-201ENST00000422468 CHKB-CPT1BH3BT56 60 aa4.38□□□□□ -1.71
TRIM43CP-201ENST00000422468 IGKV2-30P06310 120 aa4.38□□□□□ -1.71
TRIM43CP-201ENST00000422468 RPL37P61927 97 aaKnown RBP4.38□□□□□ -1.71
TRIM43CP-201ENST00000422468 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
TRIM43CP-201ENST00000422468 PRR15LQ9BU68 103 aa4.38□□□□□ -1.71
TRIM43CP-201ENST00000422468 IGHV6-1A0A0B4J1U7 121 aa4.37□□□□□ -1.71
TRIM43CP-201ENST00000422468 ATP11AUNQ6ZP68 121 aa4.37□□□□□ -1.71
TRIM43CP-201ENST00000422468 NDUFS5O43920 106 aa4.36□□□□□ -1.71
TRIM43CP-201ENST00000422468 MT1HP80294 61 aa4.36□□□□□ -1.71
TRIM43CP-201ENST00000422468 FSIP2Q5CZC0 6907 aa4.36□□□□□ -1.71
TRIM43CP-201ENST00000422468 CDC42SE1Q9NRR8 79 aa4.35□□□□□ -1.71
TRIM43CP-201ENST00000422468 FLGP20930 4061 aaPredicted RBP4.34□□□□□ -1.71
TRIM43CP-201ENST00000422468 A6NED7 52 aa4.33□□□□□ -1.72
TRIM43CP-201ENST00000422468 HRES1P13985 223 aa4.33□□□□□ -1.72
TRIM43CP-201ENST00000422468 CRCT1Q9UGL9 99 aa4.33□□□□□ -1.72
TRIM43CP-201ENST00000422468 ACYP2P14621 99 aa4.32□□□□□ -1.72
TRIM43CP-201ENST00000422468 COX6B2Q6YFQ2 88 aa4.31□□□□□ -1.72
TRIM43CP-201ENST00000422468 SEC61GP60059 68 aa4.3□□□□□ -1.72
TRIM43CP-201ENST00000422468 LCA10Q71F78 164 aa4.3□□□□□ -1.72
TRIM43CP-201ENST00000422468 M0R2T5 61 aa4.29□□□□□ -1.72
TRIM43CP-201ENST00000422468 LINC00313P59037 77 aa4.29□□□□□ -1.72
TRIM43CP-201ENST00000422468 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
TRIM43CP-201ENST00000422468 NOTCH2NLQ7Z3S9 236 aa4.29□□□□□ -1.72
TRIM43CP-201ENST00000422468 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
TRIM43CP-201ENST00000422468 DMAC1Q96GE9 116 aa4.29□□□□□ -1.72
TRIM43CP-201ENST00000422468 A6NN06 94 aa4.27□□□□□ -1.73
TRIM43CP-201ENST00000422468 Q5W150 140 aa4.27□□□□□ -1.73
TRIM43CP-201ENST00000422468 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
TRIM43CP-201ENST00000422468 C20orf166-AS1Q96NR2 134 aa4.25□□□□□ -1.73
TRIM43CP-201ENST00000422468 A8MU10 97 aa4.24□□□□□ -1.73
TRIM43CP-201ENST00000422468 SPTSSBQ8NFR3 76 aa4.24□□□□□ -1.73
TRIM43CP-201ENST00000422468 A8MUU9 505 aa4.23□□□□□ -1.73
TRIM43CP-201ENST00000422468 C7orf65Q6ZTY9 151 aa4.22□□□□□ -1.73
TRIM43CP-201ENST00000422468 SPINK7P58062 85 aa4.21□□□□□ -1.74
TRIM43CP-201ENST00000422468 IGKV2D-30A0A075B6S6 120 aa4.2□□□□□ -1.74
TRIM43CP-201ENST00000422468 SPATA8Q6RVD6 105 aa4.18□□□□□ -1.74
TRIM43CP-201ENST00000422468 A0A1B0GU69 56 aa4.17□□□□□ -1.74
TRIM43CP-201ENST00000422468 UQCR11O14957 56 aa4.15□□□□□ -1.75
TRIM43CP-201ENST00000422468 RBM12B-AS1Q9P1G2 102 aa4.15□□□□□ -1.75
TRIM43CP-201ENST00000422468 USH2AO75445 5202 aa4.13□□□□□ -1.75
TRIM43CP-201ENST00000422468 MIR22HGQ0VDD5 57 aa4.11□□□□□ -1.75
TRIM43CP-201ENST00000422468 SSPOA2VEC9 5147 aa4.08□□□□□ -1.76
TRIM43CP-201ENST00000422468 MT2AP02795 61 aa4.06□□□□□ -1.76
TRIM43CP-201ENST00000422468 MT1FP04733 61 aa4.02□□□□□ -1.77
TRIM43CP-201ENST00000422468 FCGBPQ9Y6R7 5405 aaPredicted RBP4.01□□□□□ -1.77
TRIM43CP-201ENST00000422468 KRTAP10-10P60014 251 aa4.01□□□□□ -1.77
TRIM43CP-201ENST00000422468 LINC01554Q52M75 96 aa3.96□□□□□ -1.78
TRIM43CP-201ENST00000422468 PRAC1Q96KF2 57 aa3.96□□□□□ -1.78
TRIM43CP-201ENST00000422468 A0A1B0GU33 70 aa3.94□□□□□ -1.78
TRIM43CP-201ENST00000422468 H1FX-AS1Q4G0G2 97 aa3.93□□□□□ -1.78
TRIM43CP-201ENST00000422468 ADM2Q7Z4H4 148 aa3.93□□□□□ -1.78
TRIM43CP-201ENST00000422468 H0YAA0 97 aa3.92□□□□□ -1.78
TRIM43CP-201ENST00000422468 K7ERS5 55 aa3.9□□□□□ -1.79
TRIM43CP-201ENST00000422468 CSAG1Q6PB30 78 aa3.89□□□□□ -1.79
TRIM43CP-201ENST00000422468 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
TRIM43CP-201ENST00000422468 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
TRIM43CP-201ENST00000422468 KRTAP19-6Q3LI70 58 aa3.86□□□□□ -1.79
TRIM43CP-201ENST00000422468 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
TRIM43CP-201ENST00000422468 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.79
TRIM43CP-201ENST00000422468 S4R3F8 94 aa3.8□□□□□ -1.8
TRIM43CP-201ENST00000422468 ROMO1P60602 79 aa3.78□□□□□ -1.8
TRIM43CP-201ENST00000422468 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.82
TRIM43CP-201ENST00000422468 MT3P25713 68 aa3.7□□□□□ -1.82
TRIM43CP-201ENST00000422468 MUC12Q9UKN1 5478 aa3.69□□□□□ -1.82
TRIM43CP-201ENST00000422468 MT1BP07438 61 aa3.69□□□□□ -1.82
TRIM43CP-201ENST00000422468 KRTAP13-4Q3LI77 160 aa3.69□□□□□ -1.82
TRIM43CP-201ENST00000422468 SPRR2GQ9BYE4 73 aa3.69□□□□□ -1.82
TRIM43CP-201ENST00000422468 CRIPTQ9P021 101 aa3.68□□□□□ -1.82
TRIM43CP-201ENST00000422468 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
TRIM43CP-201ENST00000422468 M0QZ58 72 aa3.67□□□□□ -1.82
TRIM43CP-201ENST00000422468 KRTAP19-8Q3LI54 63 aa3.67□□□□□ -1.82
TRIM43CP-201ENST00000422468 A0A0D9SG42 100 aa3.64□□□□□ -1.83
TRIM43CP-201ENST00000422468 P0C880 135 aa3.64□□□□□ -1.83
TRIM43CP-201ENST00000422468 NEBP20929 6669 aa3.63□□□□□ -1.83
TRIM43CP-201ENST00000422468 KRTAP10-5P60370 271 aa3.61□□□□□ -1.83
TRIM43CP-201ENST00000422468 KRTAP12-1P59990 96 aa3.6□□□□□ -1.83
TRIM43CP-201ENST00000422468 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms