RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 MIR22HGQ0VDD5 57 aa8.41□□□□□ -1.06
CTSB-203ENST00000420692 KTN1-AS1Q86SY8 53 aa8.37□□□□□ -1.07
CTSB-203ENST00000420692 LPAP08519 4548 aa8.33□□□□□ -1.08
CTSB-203ENST00000420692 LRP2P98164 4655 aa8.33□□□□□ -1.08
CTSB-203ENST00000420692 SEC61GP60059 68 aa8.33□□□□□ -1.08
CTSB-203ENST00000420692 KRTAP3-3Q9BYR6 98 aa8.28□□□□□ -1.08
CTSB-203ENST00000420692 H0YAA0 97 aa8.27□□□□□ -1.08
CTSB-203ENST00000420692 ABCA13Q86UQ4 5058 aa8.26□□□□□ -1.09
CTSB-203ENST00000420692 KRTAP4-5Q9BYR2 181 aa8.26□□□□□ -1.09
CTSB-203ENST00000420692 A0A1B0GU33 70 aa8.22□□□□□ -1.09
CTSB-203ENST00000420692 H1FX-AS1Q4G0G2 97 aa8.22□□□□□ -1.09
CTSB-203ENST00000420692 TPRXLQ17RH7 258 aa8.16□□□□□ -1.1
CTSB-203ENST00000420692 ADM2Q7Z4H4 148 aa8.16□□□□□ -1.1
CTSB-203ENST00000420692 KRTAP10-6P60371 365 aaPredicted RBP8.14□□□□□ -1.11
CTSB-203ENST00000420692 PRAC1Q96KF2 57 aa8.12□□□□□ -1.11
CTSB-203ENST00000420692 S4R3F8 94 aa8.12□□□□□ -1.11
CTSB-203ENST00000420692 KRTAP3-2Q9BYR7 98 aa8.11□□□□□ -1.11
CTSB-203ENST00000420692 RBM12B-AS1Q9P1G2 102 aa8.11□□□□□ -1.11
CTSB-203ENST00000420692 HERC2O95714 4834 aa8.04□□□□□ -1.12
CTSB-203ENST00000420692 KRTAP13-4Q3LI77 160 aa8.03□□□□□ -1.12
CTSB-203ENST00000420692 MUC17Q685J3 4493 aa8.01□□□□□ -1.13
CTSB-203ENST00000420692 P0C880 135 aa7.99□□□□□ -1.13
CTSB-203ENST00000420692 CSAG1Q6PB30 78 aa7.88□□□□□ -1.15
CTSB-203ENST00000420692 KRTAP4-1Q9BYQ7 146 aa7.87□□□□□ -1.15
CTSB-203ENST00000420692 BIRC6Q9NR09 4857 aa7.87□□□□□ -1.15
CTSB-203ENST00000420692 A0A0D9SG42 100 aa7.86□□□□□ -1.15
CTSB-203ENST00000420692 J3QL48 77 aa7.83□□□□□ -1.16
CTSB-203ENST00000420692 SEC61BP60468 96 aaKnown RBP7.82□□□□□ -1.16
CTSB-203ENST00000420692 K7ERS5 55 aa7.8□□□□□ -1.16
CTSB-203ENST00000420692 KRTAP19-2Q3LHN2 52 aa7.74□□□□□ -1.17
CTSB-203ENST00000420692 KRTAP12-2P59991 146 aa7.72□□□□□ -1.17
CTSB-203ENST00000420692 LINC01554Q52M75 96 aa7.71□□□□□ -1.17
CTSB-203ENST00000420692 KRTAP25-1Q3LHN0 102 aa7.7□□□□□ -1.18
CTSB-203ENST00000420692 MUC2Q02817 5179 aa7.69□□□□□ -1.18
CTSB-203ENST00000420692 ROMO1P60602 79 aa7.68□□□□□ -1.18
CTSB-203ENST00000420692 HERC1Q15751 4861 aa7.68□□□□□ -1.18
CTSB-203ENST00000420692 KRTAP12-1P59990 96 aa7.68□□□□□ -1.18
CTSB-203ENST00000420692 CRIPTQ9P021 101 aa7.68□□□□□ -1.18
CTSB-203ENST00000420692 M0QZ58 72 aa7.66□□□□□ -1.18
CTSB-203ENST00000420692 FLGP20930 4061 aaPredicted RBP7.61□□□□□ -1.19
CTSB-203ENST00000420692 PCLOQ9Y6V0 5065 aa7.61□□□□□ -1.19
CTSB-203ENST00000420692 HMCN2Q8NDA2 5059 aa7.6□□□□□ -1.19
CTSB-203ENST00000420692 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.19
CTSB-203ENST00000420692 SPINT4Q6UDR6 99 aa7.59□□□□□ -1.19
CTSB-203ENST00000420692 R4GN34 69 aa7.5□□□□□ -1.21
CTSB-203ENST00000420692 C10orf95Q9H7T3 257 aa7.46□□□□□ -1.22
CTSB-203ENST00000420692 FAT4Q6V0I7 4981 aa7.34□□□□□ -1.23
CTSB-203ENST00000420692 LCE2CQ5TA81 110 aa7.33□□□□□ -1.24
CTSB-203ENST00000420692 RNF213Q63HN8 5207 aa7.25□□□□□ -1.25
CTSB-203ENST00000420692 H3BS24 57 aa7.25□□□□□ -1.25
CTSB-203ENST00000420692 UBR4Q5T4S7 5183 aa7.22□□□□□ -1.25
CTSB-203ENST00000420692 MT1HP80294 61 aa7.09□□□□□ -1.27
CTSB-203ENST00000420692 CAMK2N1Q7Z7J9 78 aa7.08□□□□□ -1.28
CTSB-203ENST00000420692 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.29
CTSB-203ENST00000420692 KRTAP15-1Q3LI76 137 aa7.01□□□□□ -1.29
CTSB-203ENST00000420692 SPRR2GQ9BYE4 73 aa7.01□□□□□ -1.29
CTSB-203ENST00000420692 M0R2T5 61 aa6.99□□□□□ -1.29
CTSB-203ENST00000420692 MT2AP02795 61 aa6.95□□□□□ -1.3
CTSB-203ENST00000420692 MT1FP04733 61 aa6.94□□□□□ -1.3
CTSB-203ENST00000420692 KRTAP9-8Q9BYQ0 159 aa6.93□□□□□ -1.3
CTSB-203ENST00000420692 KRTAP10-10P60014 251 aa6.86□□□□□ -1.31
CTSB-203ENST00000420692 PP632Q6XCG6 107 aa6.83□□□□□ -1.32
CTSB-203ENST00000420692 TNP1P09430 55 aa6.81□□□□□ -1.32
CTSB-203ENST00000420692 PLAC4Q8WY50 150 aa6.81□□□□□ -1.32
CTSB-203ENST00000420692 KRTAP19-8Q3LI54 63 aa6.74□□□□□ -1.33
CTSB-203ENST00000420692 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
CTSB-203ENST00000420692 NDUFAF8A1L188 74 aa6.69□□□□□ -1.34
CTSB-203ENST00000420692 MT1BP07438 61 aa6.69□□□□□ -1.34
CTSB-203ENST00000420692 KRTAP9-3Q9BYQ3 159 aa6.65□□□□□ -1.35
CTSB-203ENST00000420692 KRTAP10-5P60370 271 aa6.58□□□□□ -1.36
CTSB-203ENST00000420692 MT1XP80297 61 aa6.58□□□□□ -1.36
CTSB-203ENST00000420692 A0A0A0MQY5 61 aa6.55□□□□□ -1.36
CTSB-203ENST00000420692 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
CTSB-203ENST00000420692 LCE2AQ5TA79 106 aaPredicted RBP6.44□□□□□ -1.38
CTSB-203ENST00000420692 LCE2BO14633 110 aa6.42□□□□□ -1.38
CTSB-203ENST00000420692 SPRR5A0A1B0GTR4 108 aa6.41□□□□□ -1.38
CTSB-203ENST00000420692 KRTAP8-1Q8IUC2 63 aa6.39□□□□□ -1.39
CTSB-203ENST00000420692 KRTAP10-7P60409 375 aaPredicted RBP6.38□□□□□ -1.39
CTSB-203ENST00000420692 USH2AO75445 5202 aa6.34□□□□□ -1.39
CTSB-203ENST00000420692 KRTAP10-12P60413 245 aa6.32□□□□□ -1.4
CTSB-203ENST00000420692 LUZP6Q538Z0 58 aa6.3□□□□□ -1.4
CTSB-203ENST00000420692 PRO2289Q9P1D8 64 aa6.24□□□□□ -1.41
CTSB-203ENST00000420692 KRTAP12-3P60328 96 aa6.22□□□□□ -1.41
CTSB-203ENST00000420692 KMT2DO14686 5537 aa6.15□□□□□ -1.42
CTSB-203ENST00000420692 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
CTSB-203ENST00000420692 KRTAP4-8A0A0G2JLE6 195 aa6.05□□□□□ -1.44
CTSB-203ENST00000420692 KRTAP4-8Q9BYQ9 185 aa6.05□□□□□ -1.44
CTSB-203ENST00000420692 SSPOA2VEC9 5147 aa6□□□□□ -1.45
CTSB-203ENST00000420692 KRTAP19-7Q3SYF9 63 aa5.88□□□□□ -1.47
CTSB-203ENST00000420692 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
CTSB-203ENST00000420692 FSIP2Q5CZC0 6907 aa5.8□□□□□ -1.48
CTSB-203ENST00000420692 KRTAP19-6Q3LI70 58 aa5.79□□□□□ -1.48
CTSB-203ENST00000420692 LCE2DQ5TA82 110 aaPredicted RBP5.72□□□□□ -1.49
CTSB-203ENST00000420692 KRTAP9-6A8MVA2 160 aa5.71□□□□□ -1.49
CTSB-203ENST00000420692 MT1EP04732 61 aa5.7□□□□□ -1.5
CTSB-203ENST00000420692 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
CTSB-203ENST00000420692 KRTAP9-2Q9BYQ4 174 aa5.69□□□□□ -1.5
CTSB-203ENST00000420692 MT1LQ93083 61 aa5.67□□□□□ -1.5
CTSB-203ENST00000420692 FCGBPQ9Y6R7 5405 aaPredicted RBP5.6□□□□□ -1.51
CTSB-203ENST00000420692 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms