RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 RPS28P62857 69 aaKnown RBP6.17□□□□□ -1.42
SKA1-203ENST00000417656 TRAV22A0A0B4J277 110 aa6.12□□□□□ -1.43
SKA1-203ENST00000417656 C4orf26Q17RF5 130 aa6.11□□□□□ -1.43
SKA1-203ENST00000417656 V9GYY9 64 aa6.11□□□□□ -1.43
SKA1-203ENST00000417656 PRO0628Q9UI54 55 aa6.09□□□□□ -1.43
SKA1-203ENST00000417656 UQCRQO14949 82 aa6.08□□□□□ -1.44
SKA1-203ENST00000417656 H1FX-AS1Q4G0G2 97 aa6.08□□□□□ -1.44
SKA1-203ENST00000417656 H0Y9P7 68 aa6.06□□□□□ -1.44
SKA1-203ENST00000417656 LOC101927531A0A1B0GV80 90 aa6.05□□□□□ -1.44
SKA1-203ENST00000417656 CYP4F30PQ9H0H9 118 aa6.05□□□□□ -1.44
SKA1-203ENST00000417656 MT2AP02795 61 aa6.03□□□□□ -1.44
SKA1-203ENST00000417656 MT-ATP8P03928 68 aa6.03□□□□□ -1.44
SKA1-203ENST00000417656 OCR1Q9BZK8 76 aa6.03□□□□□ -1.44
SKA1-203ENST00000417656 ATOX1O00244 68 aa6.02□□□□□ -1.45
SKA1-203ENST00000417656 C1orf64Q8NEQ6 169 aa6.02□□□□□ -1.45
SKA1-203ENST00000417656 KRTAP3-1Q9BYR8 98 aa6.02□□□□□ -1.45
SKA1-203ENST00000417656 CCDC179H3BU77 68 aa6□□□□□ -1.45
SKA1-203ENST00000417656 MT1FP04733 61 aa5.99□□□□□ -1.45
SKA1-203ENST00000417656 LINC00208Q96KT6 92 aa5.97□□□□□ -1.45
SKA1-203ENST00000417656 IMUPQ9GZP8 106 aa5.97□□□□□ -1.45
SKA1-203ENST00000417656 MP68P56378 58 aa5.96□□□□□ -1.46
SKA1-203ENST00000417656 S4R3F8 94 aa5.95□□□□□ -1.46
SKA1-203ENST00000417656 KRTAP10-10P60014 251 aa5.94□□□□□ -1.46
SKA1-203ENST00000417656 FAM236AA0A1B0GUQ0 79 aa5.93□□□□□ -1.46
SKA1-203ENST00000417656 FAM236BA0A1B0GV22 79 aa5.93□□□□□ -1.46
SKA1-203ENST00000417656 TMEM258P61165 79 aa5.92□□□□□ -1.46
SKA1-203ENST00000417656 KLKP1Q107X0 134 aa5.92□□□□□ -1.46
SKA1-203ENST00000417656 LCA10Q71F78 164 aa5.91□□□□□ -1.46
SKA1-203ENST00000417656 H3BPC8 53 aa5.89□□□□□ -1.47
SKA1-203ENST00000417656 FSIP2Q5CZC0 6907 aa5.86□□□□□ -1.47
SKA1-203ENST00000417656 TRAV7A0A075B6U4 112 aa5.85□□□□□ -1.47
SKA1-203ENST00000417656 CSAG1Q6PB30 78 aa5.84□□□□□ -1.47
SKA1-203ENST00000417656 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.47
SKA1-203ENST00000417656 A8MUN3 132 aa5.82□□□□□ -1.48
SKA1-203ENST00000417656 COX7CP15954 63 aa5.8□□□□□ -1.48
SKA1-203ENST00000417656 USH2AO75445 5202 aa5.79□□□□□ -1.48
SKA1-203ENST00000417656 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
SKA1-203ENST00000417656 DMAC1Q96GE9 116 aa5.76□□□□□ -1.49
SKA1-203ENST00000417656 NDUFC1O43677 76 aa5.75□□□□□ -1.49
SKA1-203ENST00000417656 PMAIP1Q13794 54 aa5.75□□□□□ -1.49
SKA1-203ENST00000417656 SERP2Q8N6R1 65 aa5.73□□□□□ -1.49
SKA1-203ENST00000417656 SNURFQ9Y675 71 aa5.73□□□□□ -1.49
SKA1-203ENST00000417656 SERP1Q9Y6X1 66 aa5.73□□□□□ -1.49
SKA1-203ENST00000417656 SSPOA2VEC9 5147 aa5.72□□□□□ -1.49
SKA1-203ENST00000417656 SMIM26A0A096LP01 95 aa5.71□□□□□ -1.5
SKA1-203ENST00000417656 C20orf197Q8N268 126 aa5.7□□□□□ -1.5
SKA1-203ENST00000417656 ATP5EP56381 51 aaPredicted RBP5.67□□□□□ -1.5
SKA1-203ENST00000417656 H0YAA0 97 aa5.64□□□□□ -1.51
SKA1-203ENST00000417656 ACYP2P14621 99 aa5.62□□□□□ -1.51
SKA1-203ENST00000417656 BRK1Q8WUW1 75 aa5.62□□□□□ -1.51
SKA1-203ENST00000417656 ADM2Q7Z4H4 148 aa5.61□□□□□ -1.51
SKA1-203ENST00000417656 SPRR2GQ9BYE4 73 aa5.61□□□□□ -1.51
SKA1-203ENST00000417656 SPANXA2-OT1Q8N9U9 137 aa5.59□□□□□ -1.51
SKA1-203ENST00000417656 CRIPTQ9P021 101 aa5.58□□□□□ -1.52
SKA1-203ENST00000417656 KRTAP19-6Q3LI70 58 aa5.56□□□□□ -1.52
SKA1-203ENST00000417656 CHKB-CPT1BH3BT56 60 aa5.55□□□□□ -1.52
SKA1-203ENST00000417656 MT1BP07438 61 aa5.55□□□□□ -1.52
SKA1-203ENST00000417656 KRTAP19-8Q3LI54 63 aa5.55□□□□□ -1.52
SKA1-203ENST00000417656 Q5VV11 94 aa5.54□□□□□ -1.52
SKA1-203ENST00000417656 CYSTM1Q9H1C7 97 aa5.53□□□□□ -1.52
SKA1-203ENST00000417656 FCGBPQ9Y6R7 5405 aaPredicted RBP5.52□□□□□ -1.53
SKA1-203ENST00000417656 P0C880 135 aa5.52□□□□□ -1.53
SKA1-203ENST00000417656 SPTSSBQ8NFR3 76 aa5.52□□□□□ -1.53
SKA1-203ENST00000417656 KTN1-AS1Q86SY8 53 aa5.51□□□□□ -1.53
SKA1-203ENST00000417656 H7BZZ5 65 aa5.48□□□□□ -1.53
SKA1-203ENST00000417656 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
SKA1-203ENST00000417656 COA5Q86WW8 74 aa5.46□□□□□ -1.54
SKA1-203ENST00000417656 R4GN34 69 aa5.44□□□□□ -1.54
SKA1-203ENST00000417656 M0QZ58 72 aa5.43□□□□□ -1.54
SKA1-203ENST00000417656 A6NN06 94 aa5.39□□□□□ -1.55
SKA1-203ENST00000417656 KRTAP10-5P60370 271 aa5.36□□□□□ -1.55
SKA1-203ENST00000417656 Q1T7F1 81 aa5.36□□□□□ -1.55
SKA1-203ENST00000417656 LINC01554Q52M75 96 aa5.34□□□□□ -1.55
SKA1-203ENST00000417656 MACF1Q9UPN3 7388 aaKnown RBP5.34□□□□□ -1.56
SKA1-203ENST00000417656 PLAC4Q8WY50 150 aa5.3□□□□□ -1.56
SKA1-203ENST00000417656 MT1XP80297 61 aa5.25□□□□□ -1.57
SKA1-203ENST00000417656 KRTAP13-4Q3LI77 160 aa5.25□□□□□ -1.57
SKA1-203ENST00000417656 PRO2289Q9P1D8 64 aa5.22□□□□□ -1.57
SKA1-203ENST00000417656 SYNE2Q8WXH0 6885 aaKnown RBP5.21□□□□□ -1.57
SKA1-203ENST00000417656 A0A1B0GU69 56 aa5.16□□□□□ -1.58
SKA1-203ENST00000417656 A0A1B0GU33 70 aa5.14□□□□□ -1.59
SKA1-203ENST00000417656 KRTAP6-3Q3LI67 103 aa5.14□□□□□ -1.59
SKA1-203ENST00000417656 SPATA8Q6RVD6 105 aa5.14□□□□□ -1.59
SKA1-203ENST00000417656 A0A0A0MQY5 61 aa5.13□□□□□ -1.59
SKA1-203ENST00000417656 PSPHP1O15172 72 aa5.12□□□□□ -1.59
SKA1-203ENST00000417656 A0A0D9SG42 100 aa5.11□□□□□ -1.59
SKA1-203ENST00000417656 CDC42SE1Q9NRR8 79 aa5.11□□□□□ -1.59
SKA1-203ENST00000417656 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
SKA1-203ENST00000417656 CAMK2N1Q7Z7J9 78 aa5.05□□□□□ -1.6
SKA1-203ENST00000417656 PRR15LQ9BU68 103 aa5.05□□□□□ -1.6
SKA1-203ENST00000417656 LINC01558Q9Y6Z2 57 aa5.05□□□□□ -1.6
SKA1-203ENST00000417656 KRTAP10-7P60409 375 aaPredicted RBP5.02□□□□□ -1.61
SKA1-203ENST00000417656 KRTAP12-1P59990 96 aa5.01□□□□□ -1.61
SKA1-203ENST00000417656 SPINT4Q6UDR6 99 aa5.01□□□□□ -1.61
SKA1-203ENST00000417656 A6NED7 52 aa5□□□□□ -1.61
SKA1-203ENST00000417656 A8MU10 97 aa5□□□□□ -1.61
SKA1-203ENST00000417656 KRTAP5-9P26371 169 aa5□□□□□ -1.61
SKA1-203ENST00000417656 KMT2DO14686 5537 aa4.99□□□□□ -1.61
SKA1-203ENST00000417656 KRTAP10-12P60413 245 aa4.97□□□□□ -1.61
SKA1-203ENST00000417656 KRTAP8-1Q8IUC2 63 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms