RNA–Protein interactions for RNA: ENST00000416804.1

HLA-DPB1-210, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

APPRIS ALT2

Gene HLA-DPB1, Length 1,361 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-210ENST00000416804 KRTAP2-4Q9BYR9 128 aa7.06□□□□□ -1.28
HLA-DPB1-210ENST00000416804 CXCL6P80162 114 aa7.05□□□□□ -1.28
HLA-DPB1-210ENST00000416804 TRAV7A0A075B6U4 112 aa7.02□□□□□ -1.29
HLA-DPB1-210ENST00000416804 NDUFC1O43677 76 aa7.02□□□□□ -1.29
HLA-DPB1-210ENST00000416804 ATP5EP56381 51 aaPredicted RBP7.02□□□□□ -1.29
HLA-DPB1-210ENST00000416804 SPRR2GQ9BYE4 73 aa7.01□□□□□ -1.29
HLA-DPB1-210ENST00000416804 TMEM254Q8TBM7 123 aa7□□□□□ -1.29
HLA-DPB1-210ENST00000416804 MRPL34Q9BQ48 92 aaKnown RBP7□□□□□ -1.29
HLA-DPB1-210ENST00000416804 KLKP1Q107X0 134 aa6.99□□□□□ -1.29
HLA-DPB1-210ENST00000416804 A0A1B0GW54 56 aa6.98□□□□□ -1.29
HLA-DPB1-210ENST00000416804 PRR15Q8IV56 129 aa6.98□□□□□ -1.29
HLA-DPB1-210ENST00000416804 IGKV2D-30A0A075B6S6 120 aa6.97□□□□□ -1.29
HLA-DPB1-210ENST00000416804 IGKV2-30P06310 120 aa6.97□□□□□ -1.29
HLA-DPB1-210ENST00000416804 C7orf65Q6ZTY9 151 aa6.97□□□□□ -1.29
HLA-DPB1-210ENST00000416804 A0A087WVE0 104 aa6.95□□□□□ -1.3
HLA-DPB1-210ENST00000416804 SERP1Q9Y6X1 66 aa6.95□□□□□ -1.3
HLA-DPB1-210ENST00000416804 MMP24-AS1A0A0U1RRL7 71 aa6.95□□□□□ -1.3
HLA-DPB1-210ENST00000416804 NDUFS5O43920 106 aa6.94□□□□□ -1.3
HLA-DPB1-210ENST00000416804 hDV103S1A0JD37 113 aa6.91□□□□□ -1.3
HLA-DPB1-210ENST00000416804 C4orf26Q17RF5 130 aa6.9□□□□□ -1.31
HLA-DPB1-210ENST00000416804 H7BZZ5 65 aa6.89□□□□□ -1.31
HLA-DPB1-210ENST00000416804 C20orf197Q8N268 126 aa6.89□□□□□ -1.31
HLA-DPB1-210ENST00000416804 CYSTM1Q9H1C7 97 aa6.89□□□□□ -1.31
HLA-DPB1-210ENST00000416804 Q5W150 140 aa6.87□□□□□ -1.31
HLA-DPB1-210ENST00000416804 CSAG1Q6PB30 78 aa6.87□□□□□ -1.31
HLA-DPB1-210ENST00000416804 SMIM26A0A096LP01 95 aa6.86□□□□□ -1.31
HLA-DPB1-210ENST00000416804 NREPQ16612 68 aa6.85□□□□□ -1.31
HLA-DPB1-210ENST00000416804 SPRR2EP22531 72 aa6.84□□□□□ -1.31
HLA-DPB1-210ENST00000416804 SPRR2BP35325 72 aa6.84□□□□□ -1.31
HLA-DPB1-210ENST00000416804 SPRR2AP35326 72 aa6.84□□□□□ -1.31
HLA-DPB1-210ENST00000416804 S4R3F8 94 aa6.84□□□□□ -1.31
HLA-DPB1-210ENST00000416804 SPRR2FQ96RM1 72 aa6.83□□□□□ -1.32
HLA-DPB1-210ENST00000416804 K7EQZ3 153 aa6.82□□□□□ -1.32
HLA-DPB1-210ENST00000416804 KRTAP2-2Q9BYT5 123 aa6.81□□□□□ -1.32
HLA-DPB1-210ENST00000416804 KRTAP2-1Q9BYU5 128 aa6.81□□□□□ -1.32
HLA-DPB1-210ENST00000416804 BPY2O14599 106 aa6.79□□□□□ -1.32
HLA-DPB1-210ENST00000416804 LCA10Q71F78 164 aa6.78□□□□□ -1.32
HLA-DPB1-210ENST00000416804 PRO0628Q9UI54 55 aa6.78□□□□□ -1.32
HLA-DPB1-210ENST00000416804 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
HLA-DPB1-210ENST00000416804 OCR1Q9BZK8 76 aa6.75□□□□□ -1.33
HLA-DPB1-210ENST00000416804 CRIPTQ9P021 101 aa6.74□□□□□ -1.33
HLA-DPB1-210ENST00000416804 HCG22E2RYF7 251 aa6.73□□□□□ -1.33
HLA-DPB1-210ENST00000416804 C1orf64Q8NEQ6 169 aa6.71□□□□□ -1.33
HLA-DPB1-210ENST00000416804 LCE1AQ5T7P2 110 aa6.69□□□□□ -1.34
HLA-DPB1-210ENST00000416804 CASC2Q6XLA1 102 aa6.69□□□□□ -1.34
HLA-DPB1-210ENST00000416804 SNURFQ9Y675 71 aa6.69□□□□□ -1.34
HLA-DPB1-210ENST00000416804 KRTAP8-1Q8IUC2 63 aa6.65□□□□□ -1.35
HLA-DPB1-210ENST00000416804 PRO2289Q9P1D8 64 aa6.64□□□□□ -1.35
HLA-DPB1-210ENST00000416804 H3BPC8 53 aa6.63□□□□□ -1.35
HLA-DPB1-210ENST00000416804 SPRR2DP22532 72 aa6.63□□□□□ -1.35
HLA-DPB1-210ENST00000416804 CYP4F30PQ9H0H9 118 aa6.63□□□□□ -1.35
HLA-DPB1-210ENST00000416804 KRTAP4-8Q9BYQ9 185 aa6.62□□□□□ -1.35
HLA-DPB1-210ENST00000416804 Q8N9L7 120 aa6.61□□□□□ -1.35
HLA-DPB1-210ENST00000416804 V9GYY9 64 aa6.61□□□□□ -1.35
HLA-DPB1-210ENST00000416804 Q1T7F1 81 aa6.59□□□□□ -1.35
HLA-DPB1-210ENST00000416804 GPR98Q8WXG9 6306 aa6.57□□□□□ -1.36
HLA-DPB1-210ENST00000416804 SPANXA2-OT1Q8N9U9 137 aa6.57□□□□□ -1.36
HLA-DPB1-210ENST00000416804 MT1XP80297 61 aa6.56□□□□□ -1.36
HLA-DPB1-210ENST00000416804 MP68P56378 58 aa6.55□□□□□ -1.36
HLA-DPB1-210ENST00000416804 KRTAP12-2P59991 146 aa6.53□□□□□ -1.36
HLA-DPB1-210ENST00000416804 BRK1Q8WUW1 75 aa6.5□□□□□ -1.37
HLA-DPB1-210ENST00000416804 A8MUN3 132 aa6.48□□□□□ -1.37
HLA-DPB1-210ENST00000416804 LCE3BQ5TA77 95 aa6.48□□□□□ -1.37
HLA-DPB1-210ENST00000416804 TRAV22A0A0B4J277 110 aa6.47□□□□□ -1.37
HLA-DPB1-210ENST00000416804 H0YAA0 97 aa6.47□□□□□ -1.37
HLA-DPB1-210ENST00000416804 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
HLA-DPB1-210ENST00000416804 TP53AIP1Q9HCN2 124 aa6.44□□□□□ -1.38
HLA-DPB1-210ENST00000416804 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
HLA-DPB1-210ENST00000416804 H0Y9P7 68 aa6.38□□□□□ -1.39
HLA-DPB1-210ENST00000416804 LINC00208Q96KT6 92 aa6.38□□□□□ -1.39
HLA-DPB1-210ENST00000416804 ADM2Q7Z4H4 148 aa6.36□□□□□ -1.39
HLA-DPB1-210ENST00000416804 LOC101927531A0A1B0GV80 90 aa6.34□□□□□ -1.39
HLA-DPB1-210ENST00000416804 DSTQ03001 7570 aaKnown RBP6.34□□□□□ -1.4
HLA-DPB1-210ENST00000416804 PMAIP1Q13794 54 aa6.32□□□□□ -1.4
HLA-DPB1-210ENST00000416804 PSPHP1O15172 72 aa6.27□□□□□ -1.41
HLA-DPB1-210ENST00000416804 R4GN34 69 aa6.26□□□□□ -1.41
HLA-DPB1-210ENST00000416804 SEC61GP60059 68 aa6.25□□□□□ -1.41
HLA-DPB1-210ENST00000416804 KRTAP10-7P60409 375 aaPredicted RBP6.24□□□□□ -1.41
HLA-DPB1-210ENST00000416804 COA5Q86WW8 74 aa6.24□□□□□ -1.41
HLA-DPB1-210ENST00000416804 LINC01558Q9Y6Z2 57 aa6.24□□□□□ -1.41
HLA-DPB1-210ENST00000416804 KRTAP10-12P60413 245 aa6.23□□□□□ -1.41
HLA-DPB1-210ENST00000416804 CHKB-CPT1BH3BT56 60 aa6.22□□□□□ -1.41
HLA-DPB1-210ENST00000416804 PRR15LQ9BU68 103 aa6.21□□□□□ -1.41
HLA-DPB1-210ENST00000416804 CDC42SE1Q9NRR8 79 aa6.21□□□□□ -1.41
HLA-DPB1-210ENST00000416804 KRTAP9-9Q9BYP9 154 aa6.2□□□□□ -1.42
HLA-DPB1-210ENST00000416804 KRTAP9-4Q9BYQ2 154 aa6.2□□□□□ -1.42
HLA-DPB1-210ENST00000416804 KTN1-AS1Q86SY8 53 aa6.19□□□□□ -1.42
HLA-DPB1-210ENST00000416804 M0QZ58 72 aa6.18□□□□□ -1.42
HLA-DPB1-210ENST00000416804 A6NED7 52 aa6.16□□□□□ -1.42
HLA-DPB1-210ENST00000416804 P0C880 135 aa6.14□□□□□ -1.43
HLA-DPB1-210ENST00000416804 KRTAP4-9Q9BYQ8 210 aa6.14□□□□□ -1.43
HLA-DPB1-210ENST00000416804 LINC01554Q52M75 96 aa6.11□□□□□ -1.43
HLA-DPB1-210ENST00000416804 ACYP2P14621 99 aa6.1□□□□□ -1.43
HLA-DPB1-210ENST00000416804 KRTAP4-12Q9BQ66 201 aa6.1□□□□□ -1.43
HLA-DPB1-210ENST00000416804 DMAC1Q96GE9 116 aa6.06□□□□□ -1.44
HLA-DPB1-210ENST00000416804 SPTSSBQ8NFR3 76 aa6.04□□□□□ -1.44
HLA-DPB1-210ENST00000416804 KRTAP4-7Q9BYR0 210 aa6.04□□□□□ -1.44
HLA-DPB1-210ENST00000416804 LCE5AQ5TCM9 118 aa5.99□□□□□ -1.45
HLA-DPB1-210ENST00000416804 A8MU10 97 aa5.96□□□□□ -1.45
HLA-DPB1-210ENST00000416804 LCE1DQ5T752 114 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms