RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 MT-ATP8P03928 68 aa8.39□□□□□ -1.07
SEMA3B-201ENST00000416295 A8MUN3 132 aa8.37□□□□□ -1.07
SEMA3B-201ENST00000416295 KLKP1Q107X0 134 aa8.37□□□□□ -1.07
SEMA3B-201ENST00000416295 KRTAP19-1Q8IUB9 90 aa8.36□□□□□ -1.07
SEMA3B-201ENST00000416295 KRTAP3-3Q9BYR6 98 aa8.35□□□□□ -1.07
SEMA3B-201ENST00000416295 FCGBPQ9Y6R7 5405 aaPredicted RBP8.35□□□□□ -1.07
SEMA3B-201ENST00000416295 FAM236AA0A1B0GUQ0 79 aa8.34□□□□□ -1.07
SEMA3B-201ENST00000416295 FAM236BA0A1B0GV22 79 aa8.34□□□□□ -1.07
SEMA3B-201ENST00000416295 SMIM20Q8N5G0 67 aa8.3□□□□□ -1.08
SEMA3B-201ENST00000416295 NDUFC1O43677 76 aa8.29□□□□□ -1.08
SEMA3B-201ENST00000416295 TRAV7A0A075B6U4 112 aa8.25□□□□□ -1.09
SEMA3B-201ENST00000416295 KRTAP19-6Q3LI70 58 aa8.2□□□□□ -1.1
SEMA3B-201ENST00000416295 DMAC1Q96GE9 116 aa8.19□□□□□ -1.1
SEMA3B-201ENST00000416295 MACF1Q9UPN3 7388 aaKnown RBP8.15□□□□□ -1.1
SEMA3B-201ENST00000416295 H0YAA0 97 aa8.15□□□□□ -1.1
SEMA3B-201ENST00000416295 SPRR2GQ9BYE4 73 aa8.14□□□□□ -1.11
SEMA3B-201ENST00000416295 CRIPTQ9P021 101 aa8.12□□□□□ -1.11
SEMA3B-201ENST00000416295 SYNE2Q8WXH0 6885 aaKnown RBP8.08□□□□□ -1.12
SEMA3B-201ENST00000416295 Q5VV11 94 aa8.05□□□□□ -1.12
SEMA3B-201ENST00000416295 ADM2Q7Z4H4 148 aa8.05□□□□□ -1.12
SEMA3B-201ENST00000416295 SERP2Q8N6R1 65 aa8.05□□□□□ -1.12
SEMA3B-201ENST00000416295 ACYP2P14621 99 aa8.04□□□□□ -1.12
SEMA3B-201ENST00000416295 KRTAP19-8Q3LI54 63 aa8.04□□□□□ -1.12
SEMA3B-201ENST00000416295 SNURFQ9Y675 71 aa8.04□□□□□ -1.12
SEMA3B-201ENST00000416295 C20orf197Q8N268 126 aa8□□□□□ -1.13
SEMA3B-201ENST00000416295 MT1BP07438 61 aa7.99□□□□□ -1.13
SEMA3B-201ENST00000416295 SPANXA2-OT1Q8N9U9 137 aa7.94□□□□□ -1.14
SEMA3B-201ENST00000416295 SPTSSBQ8NFR3 76 aa7.93□□□□□ -1.14
SEMA3B-201ENST00000416295 CHKB-CPT1BH3BT56 60 aa7.9□□□□□ -1.14
SEMA3B-201ENST00000416295 KRTAP6-3Q3LI67 103 aa7.89□□□□□ -1.15
SEMA3B-201ENST00000416295 P0C880 135 aa7.87□□□□□ -1.15
SEMA3B-201ENST00000416295 A6NN06 94 aa7.85□□□□□ -1.15
SEMA3B-201ENST00000416295 COX7CP15954 63 aa7.85□□□□□ -1.15
SEMA3B-201ENST00000416295 R4GN34 69 aa7.85□□□□□ -1.15
SEMA3B-201ENST00000416295 KRTAP3-2Q9BYR7 98 aa7.83□□□□□ -1.16
SEMA3B-201ENST00000416295 KRTAP10-5P60370 271 aa7.79□□□□□ -1.16
SEMA3B-201ENST00000416295 M0QZ58 72 aa7.78□□□□□ -1.16
SEMA3B-201ENST00000416295 PLAC4Q8WY50 150 aa7.7□□□□□ -1.18
SEMA3B-201ENST00000416295 COA5Q86WW8 74 aa7.69□□□□□ -1.18
SEMA3B-201ENST00000416295 ANAPC13Q9BS18 74 aa7.69□□□□□ -1.18
SEMA3B-201ENST00000416295 H7BZZ5 65 aa7.68□□□□□ -1.18
SEMA3B-201ENST00000416295 LINC01554Q52M75 96 aa7.65□□□□□ -1.18
SEMA3B-201ENST00000416295 CYSTM1Q9H1C7 97 aa7.65□□□□□ -1.18
SEMA3B-201ENST00000416295 PRO2289Q9P1D8 64 aa7.63□□□□□ -1.19
SEMA3B-201ENST00000416295 NEBP20929 6669 aa7.63□□□□□ -1.19
SEMA3B-201ENST00000416295 MT1XP80297 61 aa7.55□□□□□ -1.2
SEMA3B-201ENST00000416295 SEC61GP60059 68 aa7.52□□□□□ -1.21
SEMA3B-201ENST00000416295 MUC12Q9UKN1 5478 aa7.51□□□□□ -1.21
SEMA3B-201ENST00000416295 CCDC179H3BU77 68 aa7.5□□□□□ -1.21
SEMA3B-201ENST00000416295 SERP1Q9Y6X1 66 aa7.48□□□□□ -1.21
SEMA3B-201ENST00000416295 KRTAP5-9P26371 169 aa7.47□□□□□ -1.21
SEMA3B-201ENST00000416295 KRTAP13-4Q3LI77 160 aa7.43□□□□□ -1.22
SEMA3B-201ENST00000416295 ATP5EP56381 51 aaPredicted RBP7.42□□□□□ -1.22
SEMA3B-201ENST00000416295 KRTAP20-1Q3LI63 56 aa7.37□□□□□ -1.23
SEMA3B-201ENST00000416295 KMT2DO14686 5537 aa7.37□□□□□ -1.23
SEMA3B-201ENST00000416295 KRTAP12-2P59991 146 aa7.36□□□□□ -1.23
SEMA3B-201ENST00000416295 A0A1B0GU33 70 aa7.33□□□□□ -1.24
SEMA3B-201ENST00000416295 MDN1Q9NU22 5596 aa7.31□□□□□ -1.24
SEMA3B-201ENST00000416295 A0A1B0GU69 56 aa7.31□□□□□ -1.24
SEMA3B-201ENST00000416295 TMEM258P61165 79 aa7.28□□□□□ -1.24
SEMA3B-201ENST00000416295 SPATA8Q6RVD6 105 aa7.26□□□□□ -1.25
SEMA3B-201ENST00000416295 CAMK2N1Q7Z7J9 78 aa7.26□□□□□ -1.25
SEMA3B-201ENST00000416295 A0A0D9SG42 100 aa7.25□□□□□ -1.25
SEMA3B-201ENST00000416295 KRTAP8-1Q8IUC2 63 aa7.22□□□□□ -1.25
SEMA3B-201ENST00000416295 SPRR2FQ96RM1 72 aa7.21□□□□□ -1.26
SEMA3B-201ENST00000416295 KRTAP10-7P60409 375 aaPredicted RBP7.2□□□□□ -1.26
SEMA3B-201ENST00000416295 KRTAP10-12P60413 245 aa7.19□□□□□ -1.26
SEMA3B-201ENST00000416295 PRR15LQ9BU68 103 aa7.18□□□□□ -1.26
SEMA3B-201ENST00000416295 SMIM26A0A096LP01 95 aa7.15□□□□□ -1.26
SEMA3B-201ENST00000416295 KRTAP2-3P0C7H8 128 aa7.15□□□□□ -1.26
SEMA3B-201ENST00000416295 KRTAP2-4Q9BYR9 128 aa7.15□□□□□ -1.26
SEMA3B-201ENST00000416295 SPRR2EP22531 72 aa7.14□□□□□ -1.27
SEMA3B-201ENST00000416295 SPRR2BP35325 72 aa7.14□□□□□ -1.27
SEMA3B-201ENST00000416295 SPRR2AP35326 72 aa7.14□□□□□ -1.27
SEMA3B-201ENST00000416295 SPINT4Q6UDR6 99 aa7.14□□□□□ -1.27
SEMA3B-201ENST00000416295 KRTAP4-8A0A0G2JLE6 195 aa7.13□□□□□ -1.27
SEMA3B-201ENST00000416295 KRTAP4-8Q9BYQ9 185 aa7.13□□□□□ -1.27
SEMA3B-201ENST00000416295 KRTAP12-1P59990 96 aa7.11□□□□□ -1.27
SEMA3B-201ENST00000416295 LINC01558Q9Y6Z2 57 aa7.11□□□□□ -1.27
SEMA3B-201ENST00000416295 A8MU10 97 aa7.03□□□□□ -1.28
SEMA3B-201ENST00000416295 LCE1AQ5T7P2 110 aa7.01□□□□□ -1.29
SEMA3B-201ENST00000416295 UQCR11O14957 56 aa6.93□□□□□ -1.3
SEMA3B-201ENST00000416295 KRTAP2-2Q9BYT5 123 aa6.92□□□□□ -1.3
SEMA3B-201ENST00000416295 KRTAP2-1Q9BYU5 128 aa6.92□□□□□ -1.3
SEMA3B-201ENST00000416295 SPRR2DP22532 72 aa6.91□□□□□ -1.3
SEMA3B-201ENST00000416295 V9GYY9 64 aa6.87□□□□□ -1.31
SEMA3B-201ENST00000416295 Q1T7F1 81 aa6.8□□□□□ -1.32
SEMA3B-201ENST00000416295 MIR22HGQ0VDD5 57 aa6.78□□□□□ -1.32
SEMA3B-201ENST00000416295 C10orf95Q9H7T3 257 aa6.76□□□□□ -1.33
SEMA3B-201ENST00000416295 PSPHP1O15172 72 aa6.75□□□□□ -1.33
SEMA3B-201ENST00000416295 TNP1P09430 55 aa6.75□□□□□ -1.33
SEMA3B-201ENST00000416295 KRTAP19-7Q3SYF9 63 aa6.74□□□□□ -1.33
SEMA3B-201ENST00000416295 PCP4P48539 62 aa6.73□□□□□ -1.33
SEMA3B-201ENST00000416295 LCE3BQ5TA77 95 aa6.73□□□□□ -1.33
SEMA3B-201ENST00000416295 MT1EP04732 61 aa6.69□□□□□ -1.34
SEMA3B-201ENST00000416295 K7ERS5 55 aa6.65□□□□□ -1.34
SEMA3B-201ENST00000416295 RPS28P62857 69 aaKnown RBP6.63□□□□□ -1.35
SEMA3B-201ENST00000416295 KRTAP19-5Q3LI72 72 aa6.63□□□□□ -1.35
SEMA3B-201ENST00000416295 LCE3AQ5TA76 89 aa6.6□□□□□ -1.35
SEMA3B-201ENST00000416295 KRTAP19-3Q7Z4W3 81 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms