RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 CASC2Q6XLA1 102 aa5.2□□□□□ -1.58
CHRNA1-206ENST00000416004 WFDC13Q8IUB5 93 aa5.2□□□□□ -1.58
CHRNA1-206ENST00000416004 LRP2P98164 4655 aa5.19□□□□□ -1.58
CHRNA1-206ENST00000416004 A8MWP4 228 aa5.19□□□□□ -1.58
CHRNA1-206ENST00000416004 RPS29P62273 56 aaKnown RBP5.18□□□□□ -1.58
CHRNA1-206ENST00000416004 TPRXLQ17RH7 258 aa5.17□□□□□ -1.58
CHRNA1-206ENST00000416004 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
CHRNA1-206ENST00000416004 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.58
CHRNA1-206ENST00000416004 TP53AIP1Q9HCN2 124 aa5.15□□□□□ -1.58
CHRNA1-206ENST00000416004 A0A1B0GVX0 72 aa5.15□□□□□ -1.59
CHRNA1-206ENST00000416004 NOTCH2NLQ7Z3S9 236 aa5.15□□□□□ -1.59
CHRNA1-206ENST00000416004 IGHV6-1A0A0B4J1U7 121 aa5.14□□□□□ -1.59
CHRNA1-206ENST00000416004 KRTAP4-2Q9BYR5 136 aa5.14□□□□□ -1.59
CHRNA1-206ENST00000416004 LINC01554Q52M75 96 aa5.13□□□□□ -1.59
CHRNA1-206ENST00000416004 LPAP08519 4548 aa5.13□□□□□ -1.59
CHRNA1-206ENST00000416004 MMP24-AS1A0A0U1RRL7 71 aa5.13□□□□□ -1.59
CHRNA1-206ENST00000416004 LINC00313P59037 77 aa5.13□□□□□ -1.59
CHRNA1-206ENST00000416004 KRTAP9-8Q9BYQ0 159 aa5.12□□□□□ -1.59
CHRNA1-206ENST00000416004 SPINK7P58062 85 aa5.11□□□□□ -1.59
CHRNA1-206ENST00000416004 KRTAP4-9Q9BYQ8 210 aa5.11□□□□□ -1.59
CHRNA1-206ENST00000416004 C8orf17Q9NRJ1 99 aa5.11□□□□□ -1.59
CHRNA1-206ENST00000416004 H3BS24 57 aa5.09□□□□□ -1.6
CHRNA1-206ENST00000416004 RNF213Q63HN8 5207 aa5.08□□□□□ -1.6
CHRNA1-206ENST00000416004 HRES1P13985 223 aa5.07□□□□□ -1.6
CHRNA1-206ENST00000416004 SEC61BP60468 96 aaKnown RBP5.07□□□□□ -1.6
CHRNA1-206ENST00000416004 KRTAP13-3Q3SY46 172 aa5.07□□□□□ -1.6
CHRNA1-206ENST00000416004 KRTAP16-1A8MUX0 517 aa5.05□□□□□ -1.6
CHRNA1-206ENST00000416004 C9orf92A6NGG3 77 aa5.04□□□□□ -1.6
CHRNA1-206ENST00000416004 PCOTHQ58A44 107 aa5.04□□□□□ -1.6
CHRNA1-206ENST00000416004 MRPL34Q9BQ48 92 aaKnown RBP5.04□□□□□ -1.6
CHRNA1-206ENST00000416004 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
CHRNA1-206ENST00000416004 SPATA8Q6RVD6 105 aa5.01□□□□□ -1.61
CHRNA1-206ENST00000416004 ACYP2P14621 99 aa4.98□□□□□ -1.61
CHRNA1-206ENST00000416004 Q5W150 140 aa4.96□□□□□ -1.62
CHRNA1-206ENST00000416004 A8MUU9 505 aa4.95□□□□□ -1.62
CHRNA1-206ENST00000416004 ADM2Q7Z4H4 148 aa4.95□□□□□ -1.62
CHRNA1-206ENST00000416004 C20orf166-AS1Q96NR2 134 aa4.95□□□□□ -1.62
CHRNA1-206ENST00000416004 A0A1B0GU69 56 aa4.94□□□□□ -1.62
CHRNA1-206ENST00000416004 UQCR11O14957 56 aa4.94□□□□□ -1.62
CHRNA1-206ENST00000416004 DMAC1Q96GE9 116 aa4.93□□□□□ -1.62
CHRNA1-206ENST00000416004 MUC2Q02817 5179 aa4.93□□□□□ -1.62
CHRNA1-206ENST00000416004 MUC17Q685J3 4493 aa4.93□□□□□ -1.62
CHRNA1-206ENST00000416004 MIR22HGQ0VDD5 57 aa4.92□□□□□ -1.62
CHRNA1-206ENST00000416004 KRTAP19-1Q8IUB9 90 aa4.9□□□□□ -1.62
CHRNA1-206ENST00000416004 RPL37P61927 97 aaKnown RBP4.88□□□□□ -1.63
CHRNA1-206ENST00000416004 CSAG1Q6PB30 78 aa4.88□□□□□ -1.63
CHRNA1-206ENST00000416004 IGKV2-30P06310 120 aa4.83□□□□□ -1.64
CHRNA1-206ENST00000416004 KRTAP4-1Q9BYQ7 146 aa4.83□□□□□ -1.64
CHRNA1-206ENST00000416004 IGKV2D-30A0A075B6S6 120 aa4.83□□□□□ -1.64
CHRNA1-206ENST00000416004 COX6B2Q6YFQ2 88 aa4.82□□□□□ -1.64
CHRNA1-206ENST00000416004 FAT4Q6V0I7 4981 aa4.81□□□□□ -1.64
CHRNA1-206ENST00000416004 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
CHRNA1-206ENST00000416004 ROMO1P60602 79 aa4.79□□□□□ -1.64
CHRNA1-206ENST00000416004 KRTAP25-1Q3LHN0 102 aa4.78□□□□□ -1.64
CHRNA1-206ENST00000416004 M0R2T5 61 aa4.76□□□□□ -1.65
CHRNA1-206ENST00000416004 MT1HP80294 61 aa4.7□□□□□ -1.66
CHRNA1-206ENST00000416004 KRTAP19-2Q3LHN2 52 aa4.68□□□□□ -1.66
CHRNA1-206ENST00000416004 KRTAP3-1Q9BYR8 98 aa4.68□□□□□ -1.66
CHRNA1-206ENST00000416004 H0YAA0 97 aa4.62□□□□□ -1.67
CHRNA1-206ENST00000416004 KRTAP10-6P60371 365 aaPredicted RBP4.62□□□□□ -1.67
CHRNA1-206ENST00000416004 K7ERS5 55 aa4.6□□□□□ -1.67
CHRNA1-206ENST00000416004 P0C880 135 aa4.59□□□□□ -1.67
CHRNA1-206ENST00000416004 A0A1B0GU33 70 aa4.57□□□□□ -1.68
CHRNA1-206ENST00000416004 H1FX-AS1Q4G0G2 97 aa4.56□□□□□ -1.68
CHRNA1-206ENST00000416004 FLGP20930 4061 aaPredicted RBP4.52□□□□□ -1.69
CHRNA1-206ENST00000416004 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
CHRNA1-206ENST00000416004 CRCT1Q9UGL9 99 aa4.51□□□□□ -1.69
CHRNA1-206ENST00000416004 S4R3F8 94 aa4.49□□□□□ -1.69
CHRNA1-206ENST00000416004 SPINT4Q6UDR6 99 aa4.46□□□□□ -1.7
CHRNA1-206ENST00000416004 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
CHRNA1-206ENST00000416004 FSIP2Q5CZC0 6907 aa4.43□□□□□ -1.7
CHRNA1-206ENST00000416004 KRTAP10-10P60014 251 aa4.42□□□□□ -1.7
CHRNA1-206ENST00000416004 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
CHRNA1-206ENST00000416004 CRIPTQ9P021 101 aa4.4□□□□□ -1.71
CHRNA1-206ENST00000416004 MT2AP02795 61 aa4.39□□□□□ -1.71
CHRNA1-206ENST00000416004 MT1FP04733 61 aa4.34□□□□□ -1.71
CHRNA1-206ENST00000416004 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.72
CHRNA1-206ENST00000416004 C10orf95Q9H7T3 257 aa4.23□□□□□ -1.73
CHRNA1-206ENST00000416004 KRTAP13-4Q3LI77 160 aa4.22□□□□□ -1.73
CHRNA1-206ENST00000416004 USH2AO75445 5202 aa4.21□□□□□ -1.74
CHRNA1-206ENST00000416004 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
CHRNA1-206ENST00000416004 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
CHRNA1-206ENST00000416004 A0A0D9SG42 100 aa4.19□□□□□ -1.74
CHRNA1-206ENST00000416004 SSPOA2VEC9 5147 aa4.15□□□□□ -1.75
CHRNA1-206ENST00000416004 M0QZ58 72 aa4.14□□□□□ -1.75
CHRNA1-206ENST00000416004 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
CHRNA1-206ENST00000416004 KRTAP12-2P59991 146 aa4.13□□□□□ -1.75
CHRNA1-206ENST00000416004 KRTAP19-6Q3LI70 58 aa4.13□□□□□ -1.75
CHRNA1-206ENST00000416004 R4GN34 69 aa4.13□□□□□ -1.75
CHRNA1-206ENST00000416004 KRTAP12-1P59990 96 aa4.12□□□□□ -1.75
CHRNA1-206ENST00000416004 FCGBPQ9Y6R7 5405 aaPredicted RBP4.08□□□□□ -1.76
CHRNA1-206ENST00000416004 SPRR2GQ9BYE4 73 aa4.07□□□□□ -1.76
CHRNA1-206ENST00000416004 PLAC4Q8WY50 150 aa4.05□□□□□ -1.76
CHRNA1-206ENST00000416004 KRTAP19-8Q3LI54 63 aa4.01□□□□□ -1.77
CHRNA1-206ENST00000416004 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
CHRNA1-206ENST00000416004 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
CHRNA1-206ENST00000416004 MT1BP07438 61 aa3.97□□□□□ -1.77
CHRNA1-206ENST00000416004 PP632Q6XCG6 107 aa3.96□□□□□ -1.77
CHRNA1-206ENST00000416004 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
CHRNA1-206ENST00000416004 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms