RNA–Protein interactions for RNA: ENST00000415947.1

PARD3B-205, Transcript of par-3 family cell polarity regulator beta, humanhuman

TSL 1 (best)

Gene PARD3B, Length 1,668 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-205ENST00000415947 S4R3F8 94 aa11.4□□□□□ -0.58
PARD3B-205ENST00000415947 LCA10Q71F78 164 aa11.38□□□□□ -0.59
PARD3B-205ENST00000415947 SPTSSBQ8NFR3 76 aa11.36□□□□□ -0.59
PARD3B-205ENST00000415947 KRTAP3-3Q9BYR6 98 aa11.35□□□□□ -0.59
PARD3B-205ENST00000415947 RNF213Q63HN8 5207 aa11.3□□□□□ -0.6
PARD3B-205ENST00000415947 Q1T7F1 81 aa11.29□□□□□ -0.6
PARD3B-205ENST00000415947 V9GYY9 64 aa11.25□□□□□ -0.61
PARD3B-205ENST00000415947 LINC01558Q9Y6Z2 57 aa11.23□□□□□ -0.61
PARD3B-205ENST00000415947 LCE2CQ5TA81 110 aa11.22□□□□□ -0.61
PARD3B-205ENST00000415947 CSAG1Q6PB30 78 aa11.17□□□□□ -0.62
PARD3B-205ENST00000415947 FLGP20930 4061 aaPredicted RBP11.1□□□□□ -0.63
PARD3B-205ENST00000415947 PRR15LQ9BU68 103 aa11.08□□□□□ -0.64
PARD3B-205ENST00000415947 A0A1B0GU69 56 aa11.07□□□□□ -0.64
PARD3B-205ENST00000415947 PSPHP1O15172 72 aa11.07□□□□□ -0.64
PARD3B-205ENST00000415947 SEC61GP60059 68 aa11.03□□□□□ -0.64
PARD3B-205ENST00000415947 MT1HP80294 61 aa10.98□□□□□ -0.65
PARD3B-205ENST00000415947 Q5VV11 94 aa10.98□□□□□ -0.65
PARD3B-205ENST00000415947 H0YAA0 97 aa10.95□□□□□ -0.66
PARD3B-205ENST00000415947 FAT4Q6V0I7 4981 aa10.93□□□□□ -0.66
PARD3B-205ENST00000415947 KRTAP3-2Q9BYR7 98 aa10.92□□□□□ -0.66
PARD3B-205ENST00000415947 KRTAP10-6P60371 365 aaPredicted RBP10.89□□□□□ -0.67
PARD3B-205ENST00000415947 ADM2Q7Z4H4 148 aa10.89□□□□□ -0.67
PARD3B-205ENST00000415947 M0R2T5 61 aa10.85□□□□□ -0.67
PARD3B-205ENST00000415947 P0C880 135 aa10.82□□□□□ -0.68
PARD3B-205ENST00000415947 A0A1B0GU33 70 aa10.77□□□□□ -0.69
PARD3B-205ENST00000415947 A6NED7 52 aa10.73□□□□□ -0.69
PARD3B-205ENST00000415947 UQCR11O14957 56 aa10.73□□□□□ -0.69
PARD3B-205ENST00000415947 LCE2AQ5TA79 106 aaPredicted RBP10.63□□□□□ -0.71
PARD3B-205ENST00000415947 MIR22HGQ0VDD5 57 aa10.59□□□□□ -0.71
PARD3B-205ENST00000415947 SPATA8Q6RVD6 105 aa10.58□□□□□ -0.72
PARD3B-205ENST00000415947 KRTAP9-8Q9BYQ0 159 aa10.58□□□□□ -0.72
PARD3B-205ENST00000415947 LORP23490 312 aaPredicted RBP10.57□□□□□ -0.72
PARD3B-205ENST00000415947 KRTAP13-4Q3LI77 160 aa10.57□□□□□ -0.72
PARD3B-205ENST00000415947 M0QZ58 72 aa10.56□□□□□ -0.72
PARD3B-205ENST00000415947 CDC42SE1Q9NRR8 79 aa10.54□□□□□ -0.72
PARD3B-205ENST00000415947 BRK1Q8WUW1 75 aa10.53□□□□□ -0.72
PARD3B-205ENST00000415947 MT2AP02795 61 aa10.53□□□□□ -0.72
PARD3B-205ENST00000415947 R4GN34 69 aa10.51□□□□□ -0.73
PARD3B-205ENST00000415947 CRIPTQ9P021 101 aa10.5□□□□□ -0.73
PARD3B-205ENST00000415947 A8MU10 97 aa10.47□□□□□ -0.73
PARD3B-205ENST00000415947 MT1FP04733 61 aa10.46□□□□□ -0.74
PARD3B-205ENST00000415947 KRTAP10-10P60014 251 aa10.43□□□□□ -0.74
PARD3B-205ENST00000415947 A0A0D9SG42 100 aa10.34□□□□□ -0.75
PARD3B-205ENST00000415947 SPRR2GQ9BYE4 73 aa10.3□□□□□ -0.76
PARD3B-205ENST00000415947 LINC01554Q52M75 96 aa10.28□□□□□ -0.76
PARD3B-205ENST00000415947 PRO0628Q9UI54 55 aa10.28□□□□□ -0.76
PARD3B-205ENST00000415947 KRTAP19-1Q8IUB9 90 aa10.27□□□□□ -0.77
PARD3B-205ENST00000415947 KRTAP9-3Q9BYQ3 159 aa10.2□□□□□ -0.78
PARD3B-205ENST00000415947 KRTAP12-1P59990 96 aa10.17□□□□□ -0.78
PARD3B-205ENST00000415947 A6NN06 94 aa10.16□□□□□ -0.78
PARD3B-205ENST00000415947 KRTAP12-2P59991 146 aa10.13□□□□□ -0.79
PARD3B-205ENST00000415947 K7ERS5 55 aa10.12□□□□□ -0.79
PARD3B-205ENST00000415947 SPINT4Q6UDR6 99 aa10.12□□□□□ -0.79
PARD3B-205ENST00000415947 KRTAP19-8Q3LI54 63 aa10.04□□□□□ -0.8
PARD3B-205ENST00000415947 PMAIP1Q13794 54 aa9.97□□□□□ -0.81
PARD3B-205ENST00000415947 LCE2BO14633 110 aa9.92□□□□□ -0.82
PARD3B-205ENST00000415947 PLAC4Q8WY50 150 aa9.91□□□□□ -0.82
PARD3B-205ENST00000415947 MT1BP07438 61 aa9.9□□□□□ -0.83
PARD3B-205ENST00000415947 CAMK2N1Q7Z7J9 78 aa9.82□□□□□ -0.84
PARD3B-205ENST00000415947 ROMO1P60602 79 aa9.7□□□□□ -0.86
PARD3B-205ENST00000415947 LCE2DQ5TA82 110 aaPredicted RBP9.7□□□□□ -0.86
PARD3B-205ENST00000415947 C10orf95Q9H7T3 257 aa9.64□□□□□ -0.87
PARD3B-205ENST00000415947 USH2AO75445 5202 aa9.6□□□□□ -0.87
PARD3B-205ENST00000415947 MT1XP80297 61 aa9.55□□□□□ -0.88
PARD3B-205ENST00000415947 KRTAP10-5P60370 271 aa9.55□□□□□ -0.88
PARD3B-205ENST00000415947 KTN1-AS1Q86SY8 53 aa9.52□□□□□ -0.89
PARD3B-205ENST00000415947 PRO2289Q9P1D8 64 aa9.47□□□□□ -0.89
PARD3B-205ENST00000415947 KRTAP25-1Q3LHN0 102 aa9.37□□□□□ -0.91
PARD3B-205ENST00000415947 TNP1P09430 55 aa9.35□□□□□ -0.91
PARD3B-205ENST00000415947 KRTAP19-6Q3LI70 58 aa9.35□□□□□ -0.91
PARD3B-205ENST00000415947 PRAC1Q96KF2 57 aa9.32□□□□□ -0.92
PARD3B-205ENST00000415947 KRTAP9-2Q9BYQ4 174 aa9.32□□□□□ -0.92
PARD3B-205ENST00000415947 FSIP2Q5CZC0 6907 aa9.28□□□□□ -0.92
PARD3B-205ENST00000415947 SSPOA2VEC9 5147 aa9.28□□□□□ -0.92
PARD3B-205ENST00000415947 KRTAP10-7P60409 375 aaPredicted RBP9.16□□□□□ -0.94
PARD3B-205ENST00000415947 SVIPQ8NHG7 77 aa9.14□□□□□ -0.95
PARD3B-205ENST00000415947 KRTAP23-1A1A580 65 aa9.07□□□□□ -0.96
PARD3B-205ENST00000415947 KRTAP10-12P60413 245 aa9.07□□□□□ -0.96
PARD3B-205ENST00000415947 PP632Q6XCG6 107 aa9.04□□□□□ -0.96
PARD3B-205ENST00000415947 CRCT1Q9UGL9 99 aa8.99□□□□□ -0.97
PARD3B-205ENST00000415947 LCE3AQ5TA76 89 aa8.96□□□□□ -0.98
PARD3B-205ENST00000415947 FCGBPQ9Y6R7 5405 aaPredicted RBP8.94□□□□□ -0.98
PARD3B-205ENST00000415947 KRTAP4-8A0A0G2JLE6 195 aa8.82□□□□□ -1
PARD3B-205ENST00000415947 KRTAP4-8Q9BYQ9 185 aa8.82□□□□□ -1
PARD3B-205ENST00000415947 KRTAP8-1Q8IUC2 63 aa8.81□□□□□ -1
PARD3B-205ENST00000415947 KMT2DO14686 5537 aa8.71□□□□□ -1.01
PARD3B-205ENST00000415947 KRTAP9-6A0A140TA67 174 aa8.62□□□□□ -1.03
PARD3B-205ENST00000415947 KRTAP12-3P60328 96 aa8.62□□□□□ -1.03
PARD3B-205ENST00000415947 KRTAP19-5Q3LI72 72 aa8.6□□□□□ -1.03
PARD3B-205ENST00000415947 KRTAP19-7Q3SYF9 63 aa8.53□□□□□ -1.04
PARD3B-205ENST00000415947 MACF1Q9UPN3 7388 aaKnown RBP8.53□□□□□ -1.04
PARD3B-205ENST00000415947 KRTAP15-1Q3LI76 137 aa8.43□□□□□ -1.06
PARD3B-205ENST00000415947 MT1EP04732 61 aa8.38□□□□□ -1.07
PARD3B-205ENST00000415947 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.32□□□□□ -1.08
PARD3B-205ENST00000415947 SYNE2Q8WXH0 6885 aaKnown RBP8.3□□□□□ -1.08
PARD3B-205ENST00000415947 SPRR2FQ96RM1 72 aa8.27□□□□□ -1.09
PARD3B-205ENST00000415947 KRTAP5-9P26371 169 aa8.24□□□□□ -1.09
PARD3B-205ENST00000415947 MT1LQ93083 61 aa8.21□□□□□ -1.1
PARD3B-205ENST00000415947 KRTAP6-3Q3LI67 103 aa8.13□□□□□ -1.11
PARD3B-205ENST00000415947 KRTAP19-4Q3LI73 84 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms