RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 H3BS24 57 aa7.8□□□□□ -1.16
LINC00398-201ENST00000414407 CSAG1Q6PB30 78 aa7.8□□□□□ -1.16
LINC00398-201ENST00000414407 KRTAP9-3Q9BYQ3 159 aa7.74□□□□□ -1.17
LINC00398-201ENST00000414407 FSIP2Q5CZC0 6907 aa7.73□□□□□ -1.17
LINC00398-201ENST00000414407 SERP2Q8N6R1 65 aa7.72□□□□□ -1.17
LINC00398-201ENST00000414407 CRCT1Q9UGL9 99 aa7.7□□□□□ -1.18
LINC00398-201ENST00000414407 NDUFC1O43677 76 aa7.69□□□□□ -1.18
LINC00398-201ENST00000414407 DMAC1Q96GE9 116 aa7.69□□□□□ -1.18
LINC00398-201ENST00000414407 SNURFQ9Y675 71 aa7.63□□□□□ -1.19
LINC00398-201ENST00000414407 C20orf197Q8N268 126 aa7.62□□□□□ -1.19
LINC00398-201ENST00000414407 USH2AO75445 5202 aa7.6□□□□□ -1.19
LINC00398-201ENST00000414407 LOC100996750A0A140TA64 210 aa7.59□□□□□ -1.19
LINC00398-201ENST00000414407 KRTAP4-6Q9BYQ5 205 aa7.59□□□□□ -1.19
LINC00398-201ENST00000414407 ACYP2P14621 99 aa7.58□□□□□ -1.2
LINC00398-201ENST00000414407 H0YAA0 97 aa7.57□□□□□ -1.2
LINC00398-201ENST00000414407 COX7CP15954 63 aa7.56□□□□□ -1.2
LINC00398-201ENST00000414407 SPANXA2-OT1Q8N9U9 137 aa7.56□□□□□ -1.2
LINC00398-201ENST00000414407 KRTAP19-1Q8IUB9 90 aa7.48□□□□□ -1.21
LINC00398-201ENST00000414407 CRIPTQ9P021 101 aa7.48□□□□□ -1.21
LINC00398-201ENST00000414407 SSPOA2VEC9 5147 aa7.47□□□□□ -1.21
LINC00398-201ENST00000414407 SPRR2GQ9BYE4 73 aa7.46□□□□□ -1.22
LINC00398-201ENST00000414407 ANAPC13Q9BS18 74 aa7.45□□□□□ -1.22
LINC00398-201ENST00000414407 SPTSSBQ8NFR3 76 aa7.44□□□□□ -1.22
LINC00398-201ENST00000414407 ADM2Q7Z4H4 148 aa7.43□□□□□ -1.22
LINC00398-201ENST00000414407 CHKB-CPT1BH3BT56 60 aa7.41□□□□□ -1.22
LINC00398-201ENST00000414407 H7BZZ5 65 aa7.38□□□□□ -1.23
LINC00398-201ENST00000414407 KRTAP19-8Q3LI54 63 aa7.36□□□□□ -1.23
LINC00398-201ENST00000414407 CYSTM1Q9H1C7 97 aa7.35□□□□□ -1.23
LINC00398-201ENST00000414407 KRTAP19-6Q3LI70 58 aa7.32□□□□□ -1.24
LINC00398-201ENST00000414407 Q5VV11 94 aa7.32□□□□□ -1.24
LINC00398-201ENST00000414407 P0C880 135 aa7.3□□□□□ -1.24
LINC00398-201ENST00000414407 MT1BP07438 61 aa7.28□□□□□ -1.24
LINC00398-201ENST00000414407 COA5Q86WW8 74 aa7.28□□□□□ -1.24
LINC00398-201ENST00000414407 CCDC179H3BU77 68 aa7.27□□□□□ -1.25
LINC00398-201ENST00000414407 FCGBPQ9Y6R7 5405 aaPredicted RBP7.26□□□□□ -1.25
LINC00398-201ENST00000414407 R4GN34 69 aa7.24□□□□□ -1.25
LINC00398-201ENST00000414407 M0QZ58 72 aa7.18□□□□□ -1.26
LINC00398-201ENST00000414407 ATP5EP56381 51 aaPredicted RBP7.15□□□□□ -1.26
LINC00398-201ENST00000414407 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.13□□□□□ -1.27
LINC00398-201ENST00000414407 A6NN06 94 aa7.09□□□□□ -1.27
LINC00398-201ENST00000414407 SEC61GP60059 68 aa7.07□□□□□ -1.28
LINC00398-201ENST00000414407 KRTAP10-5P60370 271 aa7.07□□□□□ -1.28
LINC00398-201ENST00000414407 TMEM258P61165 79 aa7.06□□□□□ -1.28
LINC00398-201ENST00000414407 PLAC4Q8WY50 150 aa7.06□□□□□ -1.28
LINC00398-201ENST00000414407 KRTAP9-7A8MTY7 169 aa7.04□□□□□ -1.28
LINC00398-201ENST00000414407 SERP1Q9Y6X1 66 aa7.04□□□□□ -1.28
LINC00398-201ENST00000414407 LINC01554Q52M75 96 aa7.03□□□□□ -1.28
LINC00398-201ENST00000414407 MACF1Q9UPN3 7388 aaKnown RBP6.96□□□□□ -1.29
LINC00398-201ENST00000414407 KRTAP4-8Q9BYQ9 185 aa6.95□□□□□ -1.3
LINC00398-201ENST00000414407 PRO2289Q9P1D8 64 aa6.95□□□□□ -1.3
LINC00398-201ENST00000414407 KRTAP13-4Q3LI77 160 aa6.94□□□□□ -1.3
LINC00398-201ENST00000414407 SVIPQ8NHG7 77 aa6.93□□□□□ -1.3
LINC00398-201ENST00000414407 A0A1B0GU69 56 aa6.92□□□□□ -1.3
LINC00398-201ENST00000414407 A0A1B0GU33 70 aa6.91□□□□□ -1.3
LINC00398-201ENST00000414407 MT1XP80297 61 aa6.91□□□□□ -1.3
LINC00398-201ENST00000414407 SYNE2Q8WXH0 6885 aaKnown RBP6.84□□□□□ -1.32
LINC00398-201ENST00000414407 PRR15LQ9BU68 103 aa6.83□□□□□ -1.32
LINC00398-201ENST00000414407 LINC01558Q9Y6Z2 57 aa6.83□□□□□ -1.32
LINC00398-201ENST00000414407 SPATA8Q6RVD6 105 aa6.81□□□□□ -1.32
LINC00398-201ENST00000414407 KRTAP6-3Q3LI67 103 aa6.76□□□□□ -1.33
LINC00398-201ENST00000414407 A0A0D9SG42 100 aa6.75□□□□□ -1.33
LINC00398-201ENST00000414407 SMIM26A0A096LP01 95 aa6.73□□□□□ -1.33
LINC00398-201ENST00000414407 PCP4P48539 62 aa6.73□□□□□ -1.33
LINC00398-201ENST00000414407 KRTAP12-2P59991 146 aa6.72□□□□□ -1.33
LINC00398-201ENST00000414407 CAMK2N1Q7Z7J9 78 aa6.7□□□□□ -1.34
LINC00398-201ENST00000414407 KRTAP12-1P59990 96 aa6.66□□□□□ -1.34
LINC00398-201ENST00000414407 SPINT4Q6UDR6 99 aa6.65□□□□□ -1.34
LINC00398-201ENST00000414407 V9GYY9 64 aa6.64□□□□□ -1.35
LINC00398-201ENST00000414407 KRTAP4-12Q9BQ66 201 aa6.63□□□□□ -1.35
LINC00398-201ENST00000414407 LCE3BQ5TA77 95 aa6.62□□□□□ -1.35
LINC00398-201ENST00000414407 A8MU10 97 aa6.61□□□□□ -1.35
LINC00398-201ENST00000414407 UQCR11O14957 56 aa6.61□□□□□ -1.35
LINC00398-201ENST00000414407 Q1T7F1 81 aa6.6□□□□□ -1.35
LINC00398-201ENST00000414407 KRTAP10-12P60413 245 aa6.59□□□□□ -1.35
LINC00398-201ENST00000414407 KRTAP5-9P26371 169 aa6.58□□□□□ -1.36
LINC00398-201ENST00000414407 KRTAP10-7P60409 375 aaPredicted RBP6.58□□□□□ -1.36
LINC00398-201ENST00000414407 RPS28P62857 69 aaKnown RBP6.56□□□□□ -1.36
LINC00398-201ENST00000414407 KMT2DO14686 5537 aa6.56□□□□□ -1.36
LINC00398-201ENST00000414407 KRTAP19-4Q3LI73 84 aa6.53□□□□□ -1.36
LINC00398-201ENST00000414407 KRTAP23-1A1A580 65 aa6.51□□□□□ -1.37
LINC00398-201ENST00000414407 KRTAP8-1Q8IUC2 63 aa6.51□□□□□ -1.37
LINC00398-201ENST00000414407 PSPHP1O15172 72 aa6.49□□□□□ -1.37
LINC00398-201ENST00000414407 KRTAP9-9Q9BYP9 154 aa6.49□□□□□ -1.37
LINC00398-201ENST00000414407 KRTAP9-4Q9BYQ2 154 aa6.49□□□□□ -1.37
LINC00398-201ENST00000414407 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
LINC00398-201ENST00000414407 MUC12Q9UKN1 5478 aa6.48□□□□□ -1.37
LINC00398-201ENST00000414407 MIR22HGQ0VDD5 57 aa6.46□□□□□ -1.38
LINC00398-201ENST00000414407 SPRR2FQ96RM1 72 aa6.42□□□□□ -1.38
LINC00398-201ENST00000414407 NEBP20929 6669 aa6.39□□□□□ -1.39
LINC00398-201ENST00000414407 MDN1Q9NU22 5596 aa6.36□□□□□ -1.39
LINC00398-201ENST00000414407 C10orf95Q9H7T3 257 aa6.33□□□□□ -1.4
LINC00398-201ENST00000414407 K7ERS5 55 aa6.31□□□□□ -1.4
LINC00398-201ENST00000414407 A6NED7 52 aa6.3□□□□□ -1.4
LINC00398-201ENST00000414407 TNP1P09430 55 aa6.28□□□□□ -1.4
LINC00398-201ENST00000414407 SPRR2EP22531 72 aa6.25□□□□□ -1.41
LINC00398-201ENST00000414407 SPRR2BP35325 72 aa6.25□□□□□ -1.41
LINC00398-201ENST00000414407 SPRR2AP35326 72 aa6.25□□□□□ -1.41
LINC00398-201ENST00000414407 LCE1AQ5T7P2 110 aa6.23□□□□□ -1.41
LINC00398-201ENST00000414407 KRTAP20-1Q3LI63 56 aa6.21□□□□□ -1.42
LINC00398-201ENST00000414407 KRTAP19-7Q3SYF9 63 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms