RNA–Protein interactions for RNA: ENST00000412847.5

PTPRN-203, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-203ENST00000412847 HIST1H4AP62805 103 aaKnown RBP5.75□□□□□ -1.49
PTPRN-203ENST00000412847 CASC2Q6XLA1 102 aa5.75□□□□□ -1.49
PTPRN-203ENST00000412847 C4orf26Q17RF5 130 aa5.73□□□□□ -1.49
PTPRN-203ENST00000412847 IMUPQ9GZP8 106 aa5.72□□□□□ -1.49
PTPRN-203ENST00000412847 Q5W150 140 aa5.7□□□□□ -1.5
PTPRN-203ENST00000412847 S4R3F8 94 aa5.69□□□□□ -1.5
PTPRN-203ENST00000412847 CSAG1Q6PB30 78 aa5.67□□□□□ -1.5
PTPRN-203ENST00000412847 TP53AIP1Q9HCN2 124 aa5.67□□□□□ -1.5
PTPRN-203ENST00000412847 A0A087WVE0 104 aa5.66□□□□□ -1.5
PTPRN-203ENST00000412847 MT-ATP8P03928 68 aa5.66□□□□□ -1.5
PTPRN-203ENST00000412847 SPRR2EP22531 72 aa5.66□□□□□ -1.5
PTPRN-203ENST00000412847 SPRR2BP35325 72 aa5.66□□□□□ -1.5
PTPRN-203ENST00000412847 SPRR2AP35326 72 aa5.66□□□□□ -1.5
PTPRN-203ENST00000412847 KLKP1Q107X0 134 aa5.66□□□□□ -1.5
PTPRN-203ENST00000412847 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.5
PTPRN-203ENST00000412847 LCA10Q71F78 164 aa5.63□□□□□ -1.51
PTPRN-203ENST00000412847 SCGB1A1P11684 91 aa5.61□□□□□ -1.51
PTPRN-203ENST00000412847 KRTAP3-1Q9BYR8 98 aa5.61□□□□□ -1.51
PTPRN-203ENST00000412847 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.51
PTPRN-203ENST00000412847 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
PTPRN-203ENST00000412847 UQCRQO14949 82 aa5.58□□□□□ -1.52
PTPRN-203ENST00000412847 SMIM20Q8N5G0 67 aa5.57□□□□□ -1.52
PTPRN-203ENST00000412847 C1orf64Q8NEQ6 169 aa5.57□□□□□ -1.52
PTPRN-203ENST00000412847 TRAV22A0A0B4J277 110 aa5.55□□□□□ -1.52
PTPRN-203ENST00000412847 ATOX1O00244 68 aa5.55□□□□□ -1.52
PTPRN-203ENST00000412847 CRIPTQ9P021 101 aa5.55□□□□□ -1.52
PTPRN-203ENST00000412847 OCR1Q9BZK8 76 aa5.54□□□□□ -1.52
PTPRN-203ENST00000412847 MP68P56378 58 aa5.51□□□□□ -1.53
PTPRN-203ENST00000412847 LCE1AQ5T7P2 110 aa5.51□□□□□ -1.53
PTPRN-203ENST00000412847 TRAV7A0A075B6U4 112 aa5.5□□□□□ -1.53
PTPRN-203ENST00000412847 LOC101927531A0A1B0GV80 90 aa5.5□□□□□ -1.53
PTPRN-203ENST00000412847 H0Y9P7 68 aa5.5□□□□□ -1.53
PTPRN-203ENST00000412847 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
PTPRN-203ENST00000412847 H3BPC8 53 aa5.49□□□□□ -1.53
PTPRN-203ENST00000412847 KRTAP3-3Q9BYR6 98 aa5.49□□□□□ -1.53
PTPRN-203ENST00000412847 SPRR2DP22532 72 aa5.48□□□□□ -1.53
PTPRN-203ENST00000412847 PRO2289Q9P1D8 64 aa5.48□□□□□ -1.53
PTPRN-203ENST00000412847 SERP2Q8N6R1 65 aa5.44□□□□□ -1.54
PTPRN-203ENST00000412847 LINC00208Q96KT6 92 aa5.44□□□□□ -1.54
PTPRN-203ENST00000412847 KRTAP3-2Q9BYR7 98 aa5.44□□□□□ -1.54
PTPRN-203ENST00000412847 CYP4F30PQ9H0H9 118 aa5.43□□□□□ -1.54
PTPRN-203ENST00000412847 MT1XP80297 61 aa5.42□□□□□ -1.54
PTPRN-203ENST00000412847 KRTAP12-2P59991 146 aa5.38□□□□□ -1.55
PTPRN-203ENST00000412847 A8MUN3 132 aa5.37□□□□□ -1.55
PTPRN-203ENST00000412847 ANAPC13Q9BS18 74 aa5.37□□□□□ -1.55
PTPRN-203ENST00000412847 COX7CP15954 63 aa5.36□□□□□ -1.55
PTPRN-203ENST00000412847 LCE3BQ5TA77 95 aa5.36□□□□□ -1.55
PTPRN-203ENST00000412847 H0YAA0 97 aa5.34□□□□□ -1.55
PTPRN-203ENST00000412847 C20orf197Q8N268 126 aa5.34□□□□□ -1.55
PTPRN-203ENST00000412847 PLAC4Q8WY50 150 aa5.33□□□□□ -1.56
PTPRN-203ENST00000412847 KRTAP4-8A0A0G2JLE6 195 aa5.31□□□□□ -1.56
PTPRN-203ENST00000412847 KRTAP4-8Q9BYQ9 185 aa5.31□□□□□ -1.56
PTPRN-203ENST00000412847 SNURFQ9Y675 71 aa5.31□□□□□ -1.56
PTPRN-203ENST00000412847 NDUFC1O43677 76 aa5.29□□□□□ -1.56
PTPRN-203ENST00000412847 ADM2Q7Z4H4 148 aa5.29□□□□□ -1.56
PTPRN-203ENST00000412847 SPANXA2-OT1Q8N9U9 137 aa5.25□□□□□ -1.57
PTPRN-203ENST00000412847 DMAC1Q96GE9 116 aa5.22□□□□□ -1.57
PTPRN-203ENST00000412847 CCDC179H3BU77 68 aa5.19□□□□□ -1.58
PTPRN-203ENST00000412847 ACYP2P14621 99 aa5.19□□□□□ -1.58
PTPRN-203ENST00000412847 R4GN34 69 aa5.19□□□□□ -1.58
PTPRN-203ENST00000412847 H7BZZ5 65 aa5.18□□□□□ -1.58
PTPRN-203ENST00000412847 DSTQ03001 7570 aaKnown RBP5.18□□□□□ -1.58
PTPRN-203ENST00000412847 KRTAP10-7P60409 375 aaPredicted RBP5.17□□□□□ -1.58
PTPRN-203ENST00000412847 KRTAP10-12P60413 245 aa5.15□□□□□ -1.59
PTPRN-203ENST00000412847 CYSTM1Q9H1C7 97 aa5.14□□□□□ -1.59
PTPRN-203ENST00000412847 M0QZ58 72 aa5.13□□□□□ -1.59
PTPRN-203ENST00000412847 ATP5EP56381 51 aaPredicted RBP5.13□□□□□ -1.59
PTPRN-203ENST00000412847 CHKB-CPT1BH3BT56 60 aa5.1□□□□□ -1.59
PTPRN-203ENST00000412847 P0C880 135 aa5.1□□□□□ -1.59
PTPRN-203ENST00000412847 SPTSSBQ8NFR3 76 aa5.1□□□□□ -1.59
PTPRN-203ENST00000412847 TMEM258P61165 79 aa5.09□□□□□ -1.59
PTPRN-203ENST00000412847 PCP4P48539 62 aa5.08□□□□□ -1.6
PTPRN-203ENST00000412847 LINC01554Q52M75 96 aa5.08□□□□□ -1.6
PTPRN-203ENST00000412847 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
PTPRN-203ENST00000412847 COA5Q86WW8 74 aa5.04□□□□□ -1.6
PTPRN-203ENST00000412847 AHNAK2Q8IVF2 5795 aa4.95□□□□□ -1.62
PTPRN-203ENST00000412847 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
PTPRN-203ENST00000412847 SERP1Q9Y6X1 66 aa4.93□□□□□ -1.62
PTPRN-203ENST00000412847 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
PTPRN-203ENST00000412847 SEC61GP60059 68 aa4.89□□□□□ -1.63
PTPRN-203ENST00000412847 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
PTPRN-203ENST00000412847 KRTAP19-7Q3SYF9 63 aa4.86□□□□□ -1.63
PTPRN-203ENST00000412847 MT1EP04732 61 aa4.84□□□□□ -1.63
PTPRN-203ENST00000412847 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
PTPRN-203ENST00000412847 MT4P47944 62 aa4.82□□□□□ -1.64
PTPRN-203ENST00000412847 A0A1B0GU69 56 aa4.81□□□□□ -1.64
PTPRN-203ENST00000412847 RPS28P62857 69 aaKnown RBP4.81□□□□□ -1.64
PTPRN-203ENST00000412847 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
PTPRN-203ENST00000412847 PRR15LQ9BU68 103 aa4.81□□□□□ -1.64
PTPRN-203ENST00000412847 V9GYY9 64 aa4.79□□□□□ -1.64
PTPRN-203ENST00000412847 LINC01558Q9Y6Z2 57 aa4.78□□□□□ -1.64
PTPRN-203ENST00000412847 SMIM26A0A096LP01 95 aa4.77□□□□□ -1.65
PTPRN-203ENST00000412847 KRTAP5-10Q6L8G5 202 aa4.75□□□□□ -1.65
PTPRN-203ENST00000412847 A0A1B0GU33 70 aa4.72□□□□□ -1.65
PTPRN-203ENST00000412847 Q1T7F1 81 aa4.72□□□□□ -1.65
PTPRN-203ENST00000412847 CAMK2N1Q7Z7J9 78 aa4.72□□□□□ -1.65
PTPRN-203ENST00000412847 MT1GP13640 62 aa4.71□□□□□ -1.66
PTPRN-203ENST00000412847 SPRR5A0A1B0GTR4 108 aa4.7□□□□□ -1.66
PTPRN-203ENST00000412847 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
PTPRN-203ENST00000412847 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms