RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 KRTAP10-10P60014 251 aa6.62□□□□□ -1.35
CPNE1-206ENST00000412056 SMIM20Q8N5G0 67 aa6.62□□□□□ -1.35
CPNE1-206ENST00000412056 LCA10Q71F78 164 aa6.61□□□□□ -1.35
CPNE1-206ENST00000412056 TRAV7A0A075B6U4 112 aa6.6□□□□□ -1.35
CPNE1-206ENST00000412056 COX7CP15954 63 aa6.6□□□□□ -1.35
CPNE1-206ENST00000412056 TMEM258P61165 79 aa6.55□□□□□ -1.36
CPNE1-206ENST00000412056 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
CPNE1-206ENST00000412056 CSAG1Q6PB30 78 aa6.54□□□□□ -1.36
CPNE1-206ENST00000412056 A8MUN3 132 aa6.53□□□□□ -1.36
CPNE1-206ENST00000412056 SERP2Q8N6R1 65 aa6.53□□□□□ -1.36
CPNE1-206ENST00000412056 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
CPNE1-206ENST00000412056 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
CPNE1-206ENST00000412056 DMAC1Q96GE9 116 aa6.47□□□□□ -1.37
CPNE1-206ENST00000412056 SNURFQ9Y675 71 aa6.46□□□□□ -1.38
CPNE1-206ENST00000412056 NDUFC1O43677 76 aa6.45□□□□□ -1.38
CPNE1-206ENST00000412056 C20orf197Q8N268 126 aa6.43□□□□□ -1.38
CPNE1-206ENST00000412056 ATP5EP56381 51 aaPredicted RBP6.36□□□□□ -1.39
CPNE1-206ENST00000412056 SERP1Q9Y6X1 66 aa6.35□□□□□ -1.39
CPNE1-206ENST00000412056 ACYP2P14621 99 aa6.34□□□□□ -1.39
CPNE1-206ENST00000412056 KRTAP19-1Q8IUB9 90 aa6.34□□□□□ -1.39
CPNE1-206ENST00000412056 FSIP2Q5CZC0 6907 aa6.34□□□□□ -1.39
CPNE1-206ENST00000412056 H0YAA0 97 aa6.33□□□□□ -1.4
CPNE1-206ENST00000412056 SPANXA2-OT1Q8N9U9 137 aa6.31□□□□□ -1.4
CPNE1-206ENST00000412056 CYSTM1Q9H1C7 97 aa6.3□□□□□ -1.4
CPNE1-206ENST00000412056 USH2AO75445 5202 aa6.3□□□□□ -1.4
CPNE1-206ENST00000412056 ADM2Q7Z4H4 148 aa6.29□□□□□ -1.4
CPNE1-206ENST00000412056 H7BZZ5 65 aa6.27□□□□□ -1.41
CPNE1-206ENST00000412056 SPRR2GQ9BYE4 73 aa6.27□□□□□ -1.41
CPNE1-206ENST00000412056 SMIM26A0A096LP01 95 aa6.26□□□□□ -1.41
CPNE1-206ENST00000412056 CHKB-CPT1BH3BT56 60 aa6.23□□□□□ -1.41
CPNE1-206ENST00000412056 CRIPTQ9P021 101 aa6.23□□□□□ -1.41
CPNE1-206ENST00000412056 PRO0628Q9UI54 55 aa6.22□□□□□ -1.41
CPNE1-206ENST00000412056 KRTAP19-8Q3LI54 63 aa6.21□□□□□ -1.42
CPNE1-206ENST00000412056 MT1BP07438 61 aa6.2□□□□□ -1.42
CPNE1-206ENST00000412056 P0C880 135 aa6.2□□□□□ -1.42
CPNE1-206ENST00000412056 SPTSSBQ8NFR3 76 aa6.2□□□□□ -1.42
CPNE1-206ENST00000412056 KRTAP19-6Q3LI70 58 aa6.19□□□□□ -1.42
CPNE1-206ENST00000412056 Q5VV11 94 aa6.18□□□□□ -1.42
CPNE1-206ENST00000412056 SSPOA2VEC9 5147 aa6.16□□□□□ -1.42
CPNE1-206ENST00000412056 COA5Q86WW8 74 aa6.15□□□□□ -1.42
CPNE1-206ENST00000412056 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
CPNE1-206ENST00000412056 KRTAP4-6Q9BYQ5 205 aa6.12□□□□□ -1.43
CPNE1-206ENST00000412056 R4GN34 69 aa6.09□□□□□ -1.43
CPNE1-206ENST00000412056 M0QZ58 72 aa6.08□□□□□ -1.44
CPNE1-206ENST00000412056 FCGBPQ9Y6R7 5405 aaPredicted RBP6.05□□□□□ -1.44
CPNE1-206ENST00000412056 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.03□□□□□ -1.44
CPNE1-206ENST00000412056 Q1T7F1 81 aa6.01□□□□□ -1.45
CPNE1-206ENST00000412056 A6NN06 94 aa6□□□□□ -1.45
CPNE1-206ENST00000412056 V9GYY9 64 aa5.99□□□□□ -1.45
CPNE1-206ENST00000412056 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
CPNE1-206ENST00000412056 LINC01554Q52M75 96 aa5.98□□□□□ -1.45
CPNE1-206ENST00000412056 BRK1Q8WUW1 75 aa5.94□□□□□ -1.46
CPNE1-206ENST00000412056 PLAC4Q8WY50 150 aa5.93□□□□□ -1.46
CPNE1-206ENST00000412056 KRTAP13-4Q3LI77 160 aa5.9□□□□□ -1.46
CPNE1-206ENST00000412056 SEC61GP60059 68 aa5.89□□□□□ -1.47
CPNE1-206ENST00000412056 KRTAP9-7A8MTY7 169 aa5.88□□□□□ -1.47
CPNE1-206ENST00000412056 MT1XP80297 61 aa5.86□□□□□ -1.47
CPNE1-206ENST00000412056 PMAIP1Q13794 54 aa5.82□□□□□ -1.48
CPNE1-206ENST00000412056 PRO2289Q9P1D8 64 aa5.82□□□□□ -1.48
CPNE1-206ENST00000412056 A0A1B0GU69 56 aa5.8□□□□□ -1.48
CPNE1-206ENST00000412056 MACF1Q9UPN3 7388 aaKnown RBP5.79□□□□□ -1.48
CPNE1-206ENST00000412056 A0A1B0GU33 70 aa5.79□□□□□ -1.48
CPNE1-206ENST00000412056 SPATA8Q6RVD6 105 aa5.78□□□□□ -1.48
CPNE1-206ENST00000412056 A0A0D9SG42 100 aa5.74□□□□□ -1.49
CPNE1-206ENST00000412056 LINC01558Q9Y6Z2 57 aa5.72□□□□□ -1.49
CPNE1-206ENST00000412056 PSPHP1O15172 72 aa5.71□□□□□ -1.5
CPNE1-206ENST00000412056 KRTAP6-3Q3LI67 103 aa5.7□□□□□ -1.5
CPNE1-206ENST00000412056 PRR15LQ9BU68 103 aa5.68□□□□□ -1.5
CPNE1-206ENST00000412056 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
CPNE1-206ENST00000412056 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
CPNE1-206ENST00000412056 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
CPNE1-206ENST00000412056 KRTAP12-2P59991 146 aa5.65□□□□□ -1.5
CPNE1-206ENST00000412056 CAMK2N1Q7Z7J9 78 aa5.64□□□□□ -1.51
CPNE1-206ENST00000412056 SYNE2Q8WXH0 6885 aaKnown RBP5.64□□□□□ -1.51
CPNE1-206ENST00000412056 KRTAP12-1P59990 96 aa5.63□□□□□ -1.51
CPNE1-206ENST00000412056 SPINT4Q6UDR6 99 aa5.63□□□□□ -1.51
CPNE1-206ENST00000412056 A8MU10 97 aa5.62□□□□□ -1.51
CPNE1-206ENST00000412056 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
CPNE1-206ENST00000412056 A6NED7 52 aa5.59□□□□□ -1.51
CPNE1-206ENST00000412056 KRTAP5-9P26371 169 aa5.56□□□□□ -1.52
CPNE1-206ENST00000412056 KRTAP10-12P60413 245 aa5.55□□□□□ -1.52
CPNE1-206ENST00000412056 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
CPNE1-206ENST00000412056 KRTAP8-1Q8IUC2 63 aa5.52□□□□□ -1.53
CPNE1-206ENST00000412056 UQCR11O14957 56 aa5.51□□□□□ -1.53
CPNE1-206ENST00000412056 KRTAP4-12Q9BQ66 201 aa5.47□□□□□ -1.53
CPNE1-206ENST00000412056 SPRR2FQ96RM1 72 aa5.46□□□□□ -1.54
CPNE1-206ENST00000412056 KMT2DO14686 5537 aa5.45□□□□□ -1.54
CPNE1-206ENST00000412056 MIR22HGQ0VDD5 57 aa5.42□□□□□ -1.54
CPNE1-206ENST00000412056 LCE3BQ5TA77 95 aa5.38□□□□□ -1.55
CPNE1-206ENST00000412056 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
CPNE1-206ENST00000412056 SPRR2EP22531 72 aa5.33□□□□□ -1.56
CPNE1-206ENST00000412056 SPRR2BP35325 72 aa5.33□□□□□ -1.56
CPNE1-206ENST00000412056 SPRR2AP35326 72 aa5.33□□□□□ -1.56
CPNE1-206ENST00000412056 NEBP20929 6669 aa5.32□□□□□ -1.56
CPNE1-206ENST00000412056 KRTAP9-9Q9BYP9 154 aa5.32□□□□□ -1.56
CPNE1-206ENST00000412056 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
CPNE1-206ENST00000412056 MUC12Q9UKN1 5478 aa5.3□□□□□ -1.56
CPNE1-206ENST00000412056 LCE1AQ5T7P2 110 aa5.28□□□□□ -1.56
CPNE1-206ENST00000412056 TNP1P09430 55 aa5.26□□□□□ -1.57
CPNE1-206ENST00000412056 K7ERS5 55 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms