RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 FAM236BA0A1B0GV22 79 aa5.54□□□□□ -1.52
NEDD1-202ENST00000411739 H3BPC8 53 aa5.49□□□□□ -1.53
NEDD1-202ENST00000411739 KRTAP19-1Q8IUB9 90 aa5.47□□□□□ -1.53
NEDD1-202ENST00000411739 TRAV7A0A075B6U4 112 aa5.46□□□□□ -1.54
NEDD1-202ENST00000411739 A8MUN3 132 aa5.46□□□□□ -1.54
NEDD1-202ENST00000411739 NDUFC1O43677 76 aa5.46□□□□□ -1.54
NEDD1-202ENST00000411739 SMIM20Q8N5G0 67 aa5.42□□□□□ -1.54
NEDD1-202ENST00000411739 SNURFQ9Y675 71 aa5.41□□□□□ -1.54
NEDD1-202ENST00000411739 FCGBPQ9Y6R7 5405 aaPredicted RBP5.4□□□□□ -1.54
NEDD1-202ENST00000411739 DMAC1Q96GE9 116 aa5.4□□□□□ -1.54
NEDD1-202ENST00000411739 ADM2Q7Z4H4 148 aa5.37□□□□□ -1.55
NEDD1-202ENST00000411739 KRTAP19-6Q3LI70 58 aa5.36□□□□□ -1.55
NEDD1-202ENST00000411739 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
NEDD1-202ENST00000411739 C20orf197Q8N268 126 aa5.35□□□□□ -1.55
NEDD1-202ENST00000411739 SERP2Q8N6R1 65 aa5.34□□□□□ -1.56
NEDD1-202ENST00000411739 MT1BP07438 61 aa5.33□□□□□ -1.56
NEDD1-202ENST00000411739 SVIPQ8NHG7 77 aa5.32□□□□□ -1.56
NEDD1-202ENST00000411739 H0YAA0 97 aa5.32□□□□□ -1.56
NEDD1-202ENST00000411739 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.31□□□□□ -1.56
NEDD1-202ENST00000411739 ACYP2P14621 99 aa5.3□□□□□ -1.56
NEDD1-202ENST00000411739 KRTAP19-8Q3LI54 63 aa5.3□□□□□ -1.56
NEDD1-202ENST00000411739 Q5VV11 94 aa5.3□□□□□ -1.56
NEDD1-202ENST00000411739 P0C880 135 aa5.28□□□□□ -1.56
NEDD1-202ENST00000411739 CRIPTQ9P021 101 aa5.28□□□□□ -1.56
NEDD1-202ENST00000411739 KRTAP3-2Q9BYR7 98 aa5.24□□□□□ -1.57
NEDD1-202ENST00000411739 CHKB-CPT1BH3BT56 60 aa5.23□□□□□ -1.57
NEDD1-202ENST00000411739 COX7CP15954 63 aa5.22□□□□□ -1.57
NEDD1-202ENST00000411739 MACF1Q9UPN3 7388 aaKnown RBP5.21□□□□□ -1.57
NEDD1-202ENST00000411739 SPANXA2-OT1Q8N9U9 137 aa5.21□□□□□ -1.58
NEDD1-202ENST00000411739 A6NN06 94 aa5.2□□□□□ -1.58
NEDD1-202ENST00000411739 KRTAP9-7A8MTY7 169 aa5.2□□□□□ -1.58
NEDD1-202ENST00000411739 CYSTM1Q9H1C7 97 aa5.2□□□□□ -1.58
NEDD1-202ENST00000411739 R4GN34 69 aa5.19□□□□□ -1.58
NEDD1-202ENST00000411739 M0QZ58 72 aa5.18□□□□□ -1.58
NEDD1-202ENST00000411739 SPTSSBQ8NFR3 76 aa5.17□□□□□ -1.58
NEDD1-202ENST00000411739 SYNE2Q8WXH0 6885 aaKnown RBP5.15□□□□□ -1.58
NEDD1-202ENST00000411739 KRTAP10-5P60370 271 aa5.14□□□□□ -1.59
NEDD1-202ENST00000411739 LINC01554Q52M75 96 aa5.14□□□□□ -1.59
NEDD1-202ENST00000411739 ANAPC13Q9BS18 74 aa5.14□□□□□ -1.59
NEDD1-202ENST00000411739 H7BZZ5 65 aa5.12□□□□□ -1.59
NEDD1-202ENST00000411739 COA5Q86WW8 74 aa5.12□□□□□ -1.59
NEDD1-202ENST00000411739 PLAC4Q8WY50 150 aa5.08□□□□□ -1.6
NEDD1-202ENST00000411739 CCDC179H3BU77 68 aa5.07□□□□□ -1.6
NEDD1-202ENST00000411739 MT1XP80297 61 aa5.03□□□□□ -1.6
NEDD1-202ENST00000411739 KRTAP13-4Q3LI77 160 aa5.01□□□□□ -1.61
NEDD1-202ENST00000411739 KRTAP6-3Q3LI67 103 aa4.98□□□□□ -1.61
NEDD1-202ENST00000411739 PRO2289Q9P1D8 64 aa4.97□□□□□ -1.61
NEDD1-202ENST00000411739 SEC61GP60059 68 aa4.94□□□□□ -1.62
NEDD1-202ENST00000411739 SERP1Q9Y6X1 66 aa4.94□□□□□ -1.62
NEDD1-202ENST00000411739 KMT2DO14686 5537 aa4.93□□□□□ -1.62
NEDD1-202ENST00000411739 SPATA8Q6RVD6 105 aa4.9□□□□□ -1.63
NEDD1-202ENST00000411739 A0A0D9SG42 100 aa4.89□□□□□ -1.63
NEDD1-202ENST00000411739 A0A1B0GU33 70 aa4.87□□□□□ -1.63
NEDD1-202ENST00000411739 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
NEDD1-202ENST00000411739 A0A1B0GU69 56 aa4.84□□□□□ -1.63
NEDD1-202ENST00000411739 KRTAP10-7P60409 375 aaPredicted RBP4.84□□□□□ -1.64
NEDD1-202ENST00000411739 ATP5EP56381 51 aaPredicted RBP4.83□□□□□ -1.64
NEDD1-202ENST00000411739 KRTAP4-8A0A0G2JLE6 195 aa4.82□□□□□ -1.64
NEDD1-202ENST00000411739 KRTAP4-8Q9BYQ9 185 aa4.82□□□□□ -1.64
NEDD1-202ENST00000411739 KRTAP12-2P59991 146 aa4.81□□□□□ -1.64
NEDD1-202ENST00000411739 KRTAP5-9P26371 169 aa4.81□□□□□ -1.64
NEDD1-202ENST00000411739 CAMK2N1Q7Z7J9 78 aa4.81□□□□□ -1.64
NEDD1-202ENST00000411739 TMEM258P61165 79 aa4.8□□□□□ -1.64
NEDD1-202ENST00000411739 SPINT4Q6UDR6 99 aa4.79□□□□□ -1.64
NEDD1-202ENST00000411739 KRTAP8-1Q8IUC2 63 aa4.78□□□□□ -1.64
NEDD1-202ENST00000411739 SPRR2FQ96RM1 72 aa4.77□□□□□ -1.65
NEDD1-202ENST00000411739 NEBP20929 6669 aa4.76□□□□□ -1.65
NEDD1-202ENST00000411739 A8MU10 97 aa4.76□□□□□ -1.65
NEDD1-202ENST00000411739 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
NEDD1-202ENST00000411739 KRTAP12-1P59990 96 aa4.74□□□□□ -1.65
NEDD1-202ENST00000411739 MDN1Q9NU22 5596 aa4.73□□□□□ -1.65
NEDD1-202ENST00000411739 LINC01558Q9Y6Z2 57 aa4.71□□□□□ -1.65
NEDD1-202ENST00000411739 PRR15LQ9BU68 103 aa4.7□□□□□ -1.66
NEDD1-202ENST00000411739 SMIM26A0A096LP01 95 aa4.69□□□□□ -1.66
NEDD1-202ENST00000411739 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
NEDD1-202ENST00000411739 KRTAP4-6Q9BYQ5 205 aa4.69□□□□□ -1.66
NEDD1-202ENST00000411739 SPRR2EP22531 72 aa4.65□□□□□ -1.66
NEDD1-202ENST00000411739 SPRR2BP35325 72 aa4.65□□□□□ -1.66
NEDD1-202ENST00000411739 SPRR2AP35326 72 aa4.65□□□□□ -1.66
NEDD1-202ENST00000411739 LCE1AQ5T7P2 110 aa4.6□□□□□ -1.67
NEDD1-202ENST00000411739 UQCR11O14957 56 aa4.56□□□□□ -1.68
NEDD1-202ENST00000411739 KRTAP20-1Q3LI63 56 aa4.56□□□□□ -1.68
NEDD1-202ENST00000411739 PSPHP1O15172 72 aa4.56□□□□□ -1.68
NEDD1-202ENST00000411739 PCP4P48539 62 aa4.54□□□□□ -1.68
NEDD1-202ENST00000411739 C10orf95Q9H7T3 257 aa4.54□□□□□ -1.68
NEDD1-202ENST00000411739 MIR22HGQ0VDD5 57 aa4.5□□□□□ -1.69
NEDD1-202ENST00000411739 Q1T7F1 81 aa4.49□□□□□ -1.69
NEDD1-202ENST00000411739 KRTAP19-7Q3SYF9 63 aa4.49□□□□□ -1.69
NEDD1-202ENST00000411739 SPRR2DP22532 72 aa4.49□□□□□ -1.69
NEDD1-202ENST00000411739 V9GYY9 64 aa4.48□□□□□ -1.69
NEDD1-202ENST00000411739 KRTAP2-3P0C7H8 128 aa4.47□□□□□ -1.69
NEDD1-202ENST00000411739 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
NEDD1-202ENST00000411739 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
NEDD1-202ENST00000411739 MT1EP04732 61 aa4.44□□□□□ -1.7
NEDD1-202ENST00000411739 TNP1P09430 55 aa4.44□□□□□ -1.7
NEDD1-202ENST00000411739 LCE3AQ5TA76 89 aa4.42□□□□□ -1.7
NEDD1-202ENST00000411739 A6NED7 52 aa4.37□□□□□ -1.71
NEDD1-202ENST00000411739 RPS28P62857 69 aaKnown RBP4.37□□□□□ -1.71
NEDD1-202ENST00000411739 KRTAP19-3Q7Z4W3 81 aa4.36□□□□□ -1.71
NEDD1-202ENST00000411739 LCE3BQ5TA77 95 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms