RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 MT-ATP8P03928 68 aa7.55□□□□□ -1.2
MRPL55-220ENST00000411464 KRTAP19-8Q3LI54 63 aa7.51□□□□□ -1.21
MRPL55-220ENST00000411464 SPRR2GQ9BYE4 73 aa7.5□□□□□ -1.21
MRPL55-220ENST00000411464 KRTAP10-5P60370 271 aa7.48□□□□□ -1.21
MRPL55-220ENST00000411464 CSAG1Q6PB30 78 aa7.48□□□□□ -1.21
MRPL55-220ENST00000411464 IMUPQ9GZP8 106 aa7.47□□□□□ -1.21
MRPL55-220ENST00000411464 S4R3F8 94 aa7.47□□□□□ -1.21
MRPL55-220ENST00000411464 KRTAP5-9P26371 169 aa7.46□□□□□ -1.22
MRPL55-220ENST00000411464 TP53AIP1Q9HCN2 124 aa7.45□□□□□ -1.22
MRPL55-220ENST00000411464 KRTAP3-1Q9BYR8 98 aa7.41□□□□□ -1.22
MRPL55-220ENST00000411464 LCA10Q71F78 164 aa7.4□□□□□ -1.22
MRPL55-220ENST00000411464 KMT2DO14686 5537 aa7.4□□□□□ -1.23
MRPL55-220ENST00000411464 KLKP1Q107X0 134 aa7.38□□□□□ -1.23
MRPL55-220ENST00000411464 C1orf64Q8NEQ6 169 aa7.38□□□□□ -1.23
MRPL55-220ENST00000411464 MDN1Q9NU22 5596 aa7.38□□□□□ -1.23
MRPL55-220ENST00000411464 UQCRQO14949 82 aa7.37□□□□□ -1.23
MRPL55-220ENST00000411464 SCGB1A1P11684 91 aa7.37□□□□□ -1.23
MRPL55-220ENST00000411464 OCR1Q9BZK8 76 aa7.36□□□□□ -1.23
MRPL55-220ENST00000411464 TRAV22A0A0B4J277 110 aa7.35□□□□□ -1.23
MRPL55-220ENST00000411464 H0Y9P7 68 aa7.32□□□□□ -1.24
MRPL55-220ENST00000411464 KRTAP2-3P0C7H8 128 aa7.3□□□□□ -1.24
MRPL55-220ENST00000411464 KRTAP2-4Q9BYR9 128 aa7.3□□□□□ -1.24
MRPL55-220ENST00000411464 KRTAP4-8Q9BYQ9 185 aa7.29□□□□□ -1.24
MRPL55-220ENST00000411464 ATOX1O00244 68 aa7.27□□□□□ -1.25
MRPL55-220ENST00000411464 CRIPTQ9P021 101 aa7.27□□□□□ -1.25
MRPL55-220ENST00000411464 LOC101927531A0A1B0GV80 90 aa7.26□□□□□ -1.25
MRPL55-220ENST00000411464 SMIM20Q8N5G0 67 aa7.26□□□□□ -1.25
MRPL55-220ENST00000411464 TRAV7A0A075B6U4 112 aa7.25□□□□□ -1.25
MRPL55-220ENST00000411464 MP68P56378 58 aa7.25□□□□□ -1.25
MRPL55-220ENST00000411464 LINC00208Q96KT6 92 aa7.24□□□□□ -1.25
MRPL55-220ENST00000411464 CYP4F30PQ9H0H9 118 aa7.24□□□□□ -1.25
MRPL55-220ENST00000411464 H3BPC8 53 aa7.19□□□□□ -1.26
MRPL55-220ENST00000411464 SPRR2FQ96RM1 72 aa7.19□□□□□ -1.26
MRPL55-220ENST00000411464 SPRR2EP22531 72 aa7.16□□□□□ -1.26
MRPL55-220ENST00000411464 SPRR2BP35325 72 aa7.16□□□□□ -1.26
MRPL55-220ENST00000411464 SPRR2AP35326 72 aa7.16□□□□□ -1.26
MRPL55-220ENST00000411464 SERP2Q8N6R1 65 aa7.16□□□□□ -1.26
MRPL55-220ENST00000411464 PRO2289Q9P1D8 64 aa7.11□□□□□ -1.27
MRPL55-220ENST00000411464 SNURFQ9Y675 71 aa7.08□□□□□ -1.28
MRPL55-220ENST00000411464 COX7CP15954 63 aa7.07□□□□□ -1.28
MRPL55-220ENST00000411464 C20orf197Q8N268 126 aa7.07□□□□□ -1.28
MRPL55-220ENST00000411464 ANAPC13Q9BS18 74 aa7.05□□□□□ -1.28
MRPL55-220ENST00000411464 KRTAP2-2Q9BYT5 123 aa7.05□□□□□ -1.28
MRPL55-220ENST00000411464 KRTAP2-1Q9BYU5 128 aa7.05□□□□□ -1.28
MRPL55-220ENST00000411464 NDUFC1O43677 76 aa7.04□□□□□ -1.28
MRPL55-220ENST00000411464 KRTAP8-1Q8IUC2 63 aa7.04□□□□□ -1.28
MRPL55-220ENST00000411464 H0YAA0 97 aa7.03□□□□□ -1.28
MRPL55-220ENST00000411464 A8MUN3 132 aa7.01□□□□□ -1.29
MRPL55-220ENST00000411464 MT1XP80297 61 aa7.01□□□□□ -1.29
MRPL55-220ENST00000411464 LCE1AQ5T7P2 110 aa7□□□□□ -1.29
MRPL55-220ENST00000411464 PLAC4Q8WY50 150 aa6.99□□□□□ -1.29
MRPL55-220ENST00000411464 ADM2Q7Z4H4 148 aa6.97□□□□□ -1.29
MRPL55-220ENST00000411464 KRTAP4-12Q9BQ66 201 aa6.96□□□□□ -1.3
MRPL55-220ENST00000411464 SPRR2DP22532 72 aa6.93□□□□□ -1.3
MRPL55-220ENST00000411464 DMAC1Q96GE9 116 aa6.93□□□□□ -1.3
MRPL55-220ENST00000411464 CCDC179H3BU77 68 aa6.91□□□□□ -1.3
MRPL55-220ENST00000411464 KRTAP12-2P59991 146 aa6.91□□□□□ -1.3
MRPL55-220ENST00000411464 CYSTM1Q9H1C7 97 aa6.91□□□□□ -1.3
MRPL55-220ENST00000411464 LCE3BQ5TA77 95 aa6.89□□□□□ -1.31
MRPL55-220ENST00000411464 SPANXA2-OT1Q8N9U9 137 aa6.88□□□□□ -1.31
MRPL55-220ENST00000411464 H7BZZ5 65 aa6.86□□□□□ -1.31
MRPL55-220ENST00000411464 R4GN34 69 aa6.85□□□□□ -1.31
MRPL55-220ENST00000411464 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
MRPL55-220ENST00000411464 ACYP2P14621 99 aa6.84□□□□□ -1.31
MRPL55-220ENST00000411464 KRTAP9-9Q9BYP9 154 aa6.81□□□□□ -1.32
MRPL55-220ENST00000411464 KRTAP9-4Q9BYQ2 154 aa6.81□□□□□ -1.32
MRPL55-220ENST00000411464 M0QZ58 72 aa6.76□□□□□ -1.33
MRPL55-220ENST00000411464 P0C880 135 aa6.75□□□□□ -1.33
MRPL55-220ENST00000411464 CHKB-CPT1BH3BT56 60 aa6.73□□□□□ -1.33
MRPL55-220ENST00000411464 LINC01554Q52M75 96 aa6.71□□□□□ -1.34
MRPL55-220ENST00000411464 COA5Q86WW8 74 aa6.7□□□□□ -1.34
MRPL55-220ENST00000411464 KRTAP10-7P60409 375 aaPredicted RBP6.69□□□□□ -1.34
MRPL55-220ENST00000411464 SPTSSBQ8NFR3 76 aa6.66□□□□□ -1.34
MRPL55-220ENST00000411464 ATP5EP56381 51 aaPredicted RBP6.65□□□□□ -1.34
MRPL55-220ENST00000411464 KRTAP10-12P60413 245 aa6.65□□□□□ -1.34
MRPL55-220ENST00000411464 TMEM258P61165 79 aa6.64□□□□□ -1.35
MRPL55-220ENST00000411464 PCP4P48539 62 aa6.63□□□□□ -1.35
MRPL55-220ENST00000411464 GPR98Q8WXG9 6306 aa6.52□□□□□ -1.37
MRPL55-220ENST00000411464 LCE1DQ5T752 114 aa6.47□□□□□ -1.37
MRPL55-220ENST00000411464 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
MRPL55-220ENST00000411464 SERP1Q9Y6X1 66 aa6.45□□□□□ -1.38
MRPL55-220ENST00000411464 DSTQ03001 7570 aaKnown RBP6.44□□□□□ -1.38
MRPL55-220ENST00000411464 KRTAP4-9Q9BYQ8 210 aa6.4□□□□□ -1.38
MRPL55-220ENST00000411464 SEC61GP60059 68 aa6.39□□□□□ -1.39
MRPL55-220ENST00000411464 A0A1B0GU69 56 aa6.33□□□□□ -1.4
MRPL55-220ENST00000411464 H3BS24 57 aa6.33□□□□□ -1.4
MRPL55-220ENST00000411464 LCE5AQ5TCM9 118 aa6.33□□□□□ -1.4
MRPL55-220ENST00000411464 LINC01558Q9Y6Z2 57 aa6.31□□□□□ -1.4
MRPL55-220ENST00000411464 KRTAP13-4Q3LI77 160 aa6.27□□□□□ -1.41
MRPL55-220ENST00000411464 KRTAP19-3Q7Z4W3 81 aa6.27□□□□□ -1.41
MRPL55-220ENST00000411464 A0A1B0GU33 70 aa6.26□□□□□ -1.41
MRPL55-220ENST00000411464 KRTAP19-7Q3SYF9 63 aa6.26□□□□□ -1.41
MRPL55-220ENST00000411464 CAMK2N1Q7Z7J9 78 aa6.25□□□□□ -1.41
MRPL55-220ENST00000411464 PRR15LQ9BU68 103 aa6.25□□□□□ -1.41
MRPL55-220ENST00000411464 RPS28P62857 69 aaKnown RBP6.24□□□□□ -1.41
MRPL55-220ENST00000411464 MT1EP04732 61 aa6.23□□□□□ -1.41
MRPL55-220ENST00000411464 SMIM26A0A096LP01 95 aa6.22□□□□□ -1.41
MRPL55-220ENST00000411464 KRTAP4-2Q9BYR5 136 aa6.21□□□□□ -1.42
MRPL55-220ENST00000411464 LCE4AQ5TA78 99 aa6.2□□□□□ -1.42
MRPL55-220ENST00000411464 SPATA8Q6RVD6 105 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms