RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 DNAH17Q9UFH2 4485 aa2.47□□□□□ -2.01
R3HDM1-204ENST00000410054 PLECQ15149 4684 aaKnown RBP2.47□□□□□ -2.01
R3HDM1-204ENST00000410054 FLNAP21333 2647 aaKnown RBP2.47□□□□□ -2.01
R3HDM1-204ENST00000410054 KRTAP13-3Q3SY46 172 aa2.47□□□□□ -2.01
R3HDM1-204ENST00000410054 PCLOQ9Y6V0 5065 aa2.46□□□□□ -2.02
R3HDM1-204ENST00000410054 DNAH8Q96JB1 4490 aa2.46□□□□□ -2.02
R3HDM1-204ENST00000410054 MEGF8Q7Z7M0 2845 aa2.45□□□□□ -2.02
R3HDM1-204ENST00000410054 SMR3AQ99954 134 aa2.45□□□□□ -2.02
R3HDM1-204ENST00000410054 KRTAP10-3P60369 221 aa2.45□□□□□ -2.02
R3HDM1-204ENST00000410054 LCE2BO14633 110 aa2.45□□□□□ -2.02
R3HDM1-204ENST00000410054 DNAH5Q8TE73 4624 aa2.44□□□□□ -2.02
R3HDM1-204ENST00000410054 NBEAL2Q6ZNJ1 2754 aa2.44□□□□□ -2.02
R3HDM1-204ENST00000410054 TNXBP22105 4242 aa2.44□□□□□ -2.02
R3HDM1-204ENST00000410054 HSPG2P98160 4391 aa2.43□□□□□ -2.02
R3HDM1-204ENST00000410054 TENM2Q9NT68 2774 aa2.42□□□□□ -2.02
R3HDM1-204ENST00000410054 HELZ2Q9BYK8 2649 aaKnown RBP2.42□□□□□ -2.02
R3HDM1-204ENST00000410054 LCE2CQ5TA81 110 aa2.42□□□□□ -2.02
R3HDM1-204ENST00000410054 MT3P25713 68 aa2.41□□□□□ -2.02
R3HDM1-204ENST00000410054 TENM1Q9UKZ4 2725 aa2.41□□□□□ -2.02
R3HDM1-204ENST00000410054 ITPR2Q14571 2701 aa2.4□□□□□ -2.03
R3HDM1-204ENST00000410054 HIVEP1P15822 2718 aa2.4□□□□□ -2.03
R3HDM1-204ENST00000410054 ATRQ13535 2644 aa2.38□□□□□ -2.03
R3HDM1-204ENST00000410054 NOTCH1P46531 2555 aa2.38□□□□□ -2.03
R3HDM1-204ENST00000410054 KRTAP17-1Q9BYP8 105 aa2.38□□□□□ -2.03
R3HDM1-204ENST00000410054 ABCA13Q86UQ4 5058 aa2.38□□□□□ -2.03
R3HDM1-204ENST00000410054 RPS29P62273 56 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-204ENST00000410054 COL6A5A8TX70 2615 aa2.37□□□□□ -2.03
R3HDM1-204ENST00000410054 KRTAP13-1Q8IUC0 172 aa2.37□□□□□ -2.03
R3HDM1-204ENST00000410054 MGAM2Q2M2H8 2515 aa2.37□□□□□ -2.03
R3HDM1-204ENST00000410054 NBEAL1Q6ZS30 2694 aa2.34□□□□□ -2.03
R3HDM1-204ENST00000410054 KRTAP10-11P60412 298 aa2.34□□□□□ -2.03
R3HDM1-204ENST00000410054 TENM3Q9P273 2699 aa2.32□□□□□ -2.04
R3HDM1-204ENST00000410054 KRTAP10-6P60371 365 aaPredicted RBP2.32□□□□□ -2.04
R3HDM1-204ENST00000410054 SRRM2Q9UQ35 2752 aaKnown RBP2.3□□□□□ -2.04
R3HDM1-204ENST00000410054 SMR3BP02814 79 aaPredicted RBP2.29□□□□□ -2.04
R3HDM1-204ENST00000410054 APOBP04114 4563 aaKnown RBP2.29□□□□□ -2.04
R3HDM1-204ENST00000410054 KRTAP1-5Q9BYS1 174 aa2.28□□□□□ -2.04
R3HDM1-204ENST00000410054 LRP1BQ9NZR2 4599 aa2.28□□□□□ -2.04
R3HDM1-204ENST00000410054 LPAP08519 4548 aa2.27□□□□□ -2.05
R3HDM1-204ENST00000410054 RYR1P21817 5038 aa2.25□□□□□ -2.05
R3HDM1-204ENST00000410054 DYNC1H1Q14204 4646 aaKnown RBP2.24□□□□□ -2.05
R3HDM1-204ENST00000410054 TGP01266 2768 aa2.23□□□□□ -2.05
R3HDM1-204ENST00000410054 BIRC6Q9NR09 4857 aa2.22□□□□□ -2.05
R3HDM1-204ENST00000410054 LORP23490 312 aaPredicted RBP2.21□□□□□ -2.06
R3HDM1-204ENST00000410054 FLGP20930 4061 aaPredicted RBP2.2□□□□□ -2.06
R3HDM1-204ENST00000410054 HERC2O95714 4834 aa2.19□□□□□ -2.06
R3HDM1-204ENST00000410054 HERC1Q15751 4861 aa2.19□□□□□ -2.06
R3HDM1-204ENST00000410054 KRTAP21-3Q3LHN1 58 aa2.16□□□□□ -2.06
R3HDM1-204ENST00000410054 LOC100996750A0A140TA64 210 aa2.16□□□□□ -2.06
R3HDM1-204ENST00000410054 KRTAP4-6Q9BYQ5 205 aa2.16□□□□□ -2.06
R3HDM1-204ENST00000410054 FAT1Q14517 4588 aa2.14□□□□□ -2.07
R3HDM1-204ENST00000410054 KIAA1109Q2LD37 5005 aa2.13□□□□□ -2.07
R3HDM1-204ENST00000410054 KRTAP1-4P0C5Y4 121 aa2.13□□□□□ -2.07
R3HDM1-204ENST00000410054 MUC2Q02817 5179 aa2.12□□□□□ -2.07
R3HDM1-204ENST00000410054 KRTAP10-5P60370 271 aa2.11□□□□□ -2.07
R3HDM1-204ENST00000410054 KRTAP10-2P60368 255 aa2.09□□□□□ -2.08
R3HDM1-204ENST00000410054 KRTAP10-1P60331 282 aa2.08□□□□□ -2.08
R3HDM1-204ENST00000410054 KRTAP12-3P60328 96 aa2.07□□□□□ -2.08
R3HDM1-204ENST00000410054 KRTAP10-4P60372 401 aaPredicted RBP2.07□□□□□ -2.08
R3HDM1-204ENST00000410054 MUC17Q685J3 4493 aa2.07□□□□□ -2.08
R3HDM1-204ENST00000410054 HMCN2Q8NDA2 5059 aa2.07□□□□□ -2.08
R3HDM1-204ENST00000410054 SPRR5A0A1B0GTR4 108 aa2.06□□□□□ -2.08
R3HDM1-204ENST00000410054 LRP1Q07954 4544 aaKnown RBP2.05□□□□□ -2.08
R3HDM1-204ENST00000410054 A0A1B0GVY2 172 aa2.04□□□□□ -2.08
R3HDM1-204ENST00000410054 LRP2P98164 4655 aa2.03□□□□□ -2.09
R3HDM1-204ENST00000410054 KRTAP10-10P60014 251 aa2□□□□□ -2.09
R3HDM1-204ENST00000410054 LCE3AQ5TA76 89 aa2□□□□□ -2.09
R3HDM1-204ENST00000410054 UBR4Q5T4S7 5183 aa1.98□□□□□ -2.09
R3HDM1-204ENST00000410054 KRTAP10-7P60409 375 aaPredicted RBP1.98□□□□□ -2.09
R3HDM1-204ENST00000410054 KRTAP10-12P60413 245 aa1.98□□□□□ -2.09
R3HDM1-204ENST00000410054 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
R3HDM1-204ENST00000410054 LCE3CQ5T5A8 94 aa1.95□□□□□ -2.1
R3HDM1-204ENST00000410054 RNF213Q63HN8 5207 aa1.94□□□□□ -2.1
R3HDM1-204ENST00000410054 KRTAP4-8Q9BYQ9 185 aa1.94□□□□□ -2.1
R3HDM1-204ENST00000410054 KRTAP2-2Q9BYT5 123 aa1.92□□□□□ -2.1
R3HDM1-204ENST00000410054 FAT4Q6V0I7 4981 aa1.91□□□□□ -2.1
R3HDM1-204ENST00000410054 KRTAP4-12Q9BQ66 201 aa1.91□□□□□ -2.1
R3HDM1-204ENST00000410054 CRCT1Q9UGL9 99 aa1.9□□□□□ -2.1
R3HDM1-204ENST00000410054 LCE3BQ5TA77 95 aa1.9□□□□□ -2.11
R3HDM1-204ENST00000410054 KRTAP9-6A0A140TA67 174 aa1.88□□□□□ -2.11
R3HDM1-204ENST00000410054 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.85□□□□□ -2.11
R3HDM1-204ENST00000410054 KRTAP9-2Q9BYQ4 174 aa1.84□□□□□ -2.11
R3HDM1-204ENST00000410054 KRTAP8-1Q8IUC2 63 aa1.82□□□□□ -2.12
R3HDM1-204ENST00000410054 KRTAP9-9Q9BYP9 154 aa1.81□□□□□ -2.12
R3HDM1-204ENST00000410054 KRTAP9-4Q9BYQ2 154 aa1.81□□□□□ -2.12
R3HDM1-204ENST00000410054 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
R3HDM1-204ENST00000410054 SYNE1Q8NF91 8797 aaKnown RBP1.79□□□□□ -2.12
R3HDM1-204ENST00000410054 LCE5AQ5TCM9 118 aa1.79□□□□□ -2.12
R3HDM1-204ENST00000410054 KRTAP19-1Q8IUB9 90 aa1.79□□□□□ -2.12
R3HDM1-204ENST00000410054 MT1HL1P0DM35 61 aa1.78□□□□□ -2.12
R3HDM1-204ENST00000410054 PRM1P04553 51 aa1.76□□□□□ -2.13
R3HDM1-204ENST00000410054 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
R3HDM1-204ENST00000410054 LCE1AQ5T7P2 110 aa1.75□□□□□ -2.13
R3HDM1-204ENST00000410054 KRTAP4-8A0A0G2JLE6 195 aa1.74□□□□□ -2.13
R3HDM1-204ENST00000410054 KRTAP6-3Q3LI67 103 aa1.74□□□□□ -2.13
R3HDM1-204ENST00000410054 LCE1EQ5T753 118 aa1.73□□□□□ -2.13
R3HDM1-204ENST00000410054 LCE1FQ5T754 118 aa1.73□□□□□ -2.13
R3HDM1-204ENST00000410054 LCE3DQ9BYE3 92 aa1.71□□□□□ -2.13
R3HDM1-204ENST00000410054 KRTAP4-7Q9BYR0 210 aa1.71□□□□□ -2.14
R3HDM1-204ENST00000410054 KRTAP19-2Q3LHN2 52 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms