RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 TMEM258P61165 79 aa6.12□□□□□ -1.43
PMS1-204ENST00000409823 KRTAP3-3Q9BYR6 98 aa6.1□□□□□ -1.43
PMS1-204ENST00000409823 COA5Q86WW8 74 aa6.08□□□□□ -1.44
PMS1-204ENST00000409823 CHKB-CPT1BH3BT56 60 aa6.08□□□□□ -1.44
PMS1-204ENST00000409823 LCE2AQ5TA79 106 aaPredicted RBP6.06□□□□□ -1.44
PMS1-204ENST00000409823 ATP5EP56381 51 aaPredicted RBP6.04□□□□□ -1.44
PMS1-204ENST00000409823 CSAG1Q6PB30 78 aa6.03□□□□□ -1.44
PMS1-204ENST00000409823 KRTAP10-6P60371 365 aaPredicted RBP5.97□□□□□ -1.45
PMS1-204ENST00000409823 LORP23490 312 aaPredicted RBP5.94□□□□□ -1.46
PMS1-204ENST00000409823 SERP1Q9Y6X1 66 aa5.93□□□□□ -1.46
PMS1-204ENST00000409823 SPTSSBQ8NFR3 76 aa5.92□□□□□ -1.46
PMS1-204ENST00000409823 KRTAP9-8Q9BYQ0 159 aa5.91□□□□□ -1.46
PMS1-204ENST00000409823 MT2AP02795 61 aa5.88□□□□□ -1.47
PMS1-204ENST00000409823 ADM2Q7Z4H4 148 aa5.88□□□□□ -1.47
PMS1-204ENST00000409823 MT1FP04733 61 aa5.86□□□□□ -1.47
PMS1-204ENST00000409823 KRTAP10-10P60014 251 aa5.85□□□□□ -1.47
PMS1-204ENST00000409823 P0C880 135 aa5.84□□□□□ -1.48
PMS1-204ENST00000409823 KRTAP3-2Q9BYR7 98 aa5.82□□□□□ -1.48
PMS1-204ENST00000409823 H0YAA0 97 aa5.8□□□□□ -1.48
PMS1-204ENST00000409823 RPS28P62857 69 aaKnown RBP5.78□□□□□ -1.48
PMS1-204ENST00000409823 SEC61GP60059 68 aa5.77□□□□□ -1.49
PMS1-204ENST00000409823 FSIP2Q5CZC0 6907 aa5.76□□□□□ -1.49
PMS1-204ENST00000409823 A0A1B0GU69 56 aa5.76□□□□□ -1.49
PMS1-204ENST00000409823 SMIM26A0A096LP01 95 aa5.74□□□□□ -1.49
PMS1-204ENST00000409823 LINC01558Q9Y6Z2 57 aa5.72□□□□□ -1.49
PMS1-204ENST00000409823 USH2AO75445 5202 aa5.72□□□□□ -1.49
PMS1-204ENST00000409823 PSPHP1O15172 72 aa5.7□□□□□ -1.5
PMS1-204ENST00000409823 PRR15LQ9BU68 103 aa5.7□□□□□ -1.5
PMS1-204ENST00000409823 KRTAP9-3Q9BYQ3 159 aa5.7□□□□□ -1.5
PMS1-204ENST00000409823 R4GN34 69 aa5.68□□□□□ -1.5
PMS1-204ENST00000409823 Q1T7F1 81 aa5.68□□□□□ -1.5
PMS1-204ENST00000409823 M0QZ58 72 aa5.67□□□□□ -1.5
PMS1-204ENST00000409823 KRTAP19-1Q8IUB9 90 aa5.66□□□□□ -1.5
PMS1-204ENST00000409823 A0A1B0GU33 70 aa5.65□□□□□ -1.51
PMS1-204ENST00000409823 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.51
PMS1-204ENST00000409823 LINC01554Q52M75 96 aa5.64□□□□□ -1.51
PMS1-204ENST00000409823 V9GYY9 64 aa5.64□□□□□ -1.51
PMS1-204ENST00000409823 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
PMS1-204ENST00000409823 CRIPTQ9P021 101 aa5.62□□□□□ -1.51
PMS1-204ENST00000409823 LCE2BO14633 110 aa5.61□□□□□ -1.51
PMS1-204ENST00000409823 SPRR2GQ9BYE4 73 aa5.61□□□□□ -1.51
PMS1-204ENST00000409823 Q5VV11 94 aa5.59□□□□□ -1.52
PMS1-204ENST00000409823 A0A0D9SG42 100 aa5.56□□□□□ -1.52
PMS1-204ENST00000409823 LCE2DQ5TA82 110 aaPredicted RBP5.54□□□□□ -1.52
PMS1-204ENST00000409823 KRTAP9-2Q9BYQ4 174 aa5.54□□□□□ -1.52
PMS1-204ENST00000409823 A8MU10 97 aa5.53□□□□□ -1.52
PMS1-204ENST00000409823 UQCR11O14957 56 aa5.52□□□□□ -1.53
PMS1-204ENST00000409823 SSPOA2VEC9 5147 aa5.51□□□□□ -1.53
PMS1-204ENST00000409823 A6NED7 52 aa5.49□□□□□ -1.53
PMS1-204ENST00000409823 MT1BP07438 61 aa5.47□□□□□ -1.53
PMS1-204ENST00000409823 KRTAP19-8Q3LI54 63 aa5.47□□□□□ -1.53
PMS1-204ENST00000409823 MIR22HGQ0VDD5 57 aa5.45□□□□□ -1.54
PMS1-204ENST00000409823 SPINT4Q6UDR6 99 aa5.42□□□□□ -1.54
PMS1-204ENST00000409823 PLAC4Q8WY50 150 aa5.4□□□□□ -1.54
PMS1-204ENST00000409823 KRTAP12-2P59991 146 aa5.39□□□□□ -1.55
PMS1-204ENST00000409823 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
PMS1-204ENST00000409823 A6NN06 94 aa5.35□□□□□ -1.55
PMS1-204ENST00000409823 CAMK2N1Q7Z7J9 78 aa5.31□□□□□ -1.56
PMS1-204ENST00000409823 CDC42SE1Q9NRR8 79 aa5.3□□□□□ -1.56
PMS1-204ENST00000409823 BRK1Q8WUW1 75 aa5.29□□□□□ -1.56
PMS1-204ENST00000409823 CRCT1Q9UGL9 99 aa5.29□□□□□ -1.56
PMS1-204ENST00000409823 FCGBPQ9Y6R7 5405 aaPredicted RBP5.29□□□□□ -1.56
PMS1-204ENST00000409823 MT1XP80297 61 aa5.26□□□□□ -1.57
PMS1-204ENST00000409823 KRTAP19-6Q3LI70 58 aa5.25□□□□□ -1.57
PMS1-204ENST00000409823 KRTAP10-5P60370 271 aa5.24□□□□□ -1.57
PMS1-204ENST00000409823 K7ERS5 55 aa5.21□□□□□ -1.57
PMS1-204ENST00000409823 PRO2289Q9P1D8 64 aa5.18□□□□□ -1.58
PMS1-204ENST00000409823 KMT2DO14686 5537 aa5.17□□□□□ -1.58
PMS1-204ENST00000409823 KRTAP9-6A0A140TA67 174 aa5.16□□□□□ -1.58
PMS1-204ENST00000409823 MACF1Q9UPN3 7388 aaKnown RBP5.14□□□□□ -1.59
PMS1-204ENST00000409823 C10orf95Q9H7T3 257 aa5.12□□□□□ -1.59
PMS1-204ENST00000409823 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
PMS1-204ENST00000409823 KRTAP10-7P60409 375 aaPredicted RBP5.07□□□□□ -1.6
PMS1-204ENST00000409823 ROMO1P60602 79 aa4.98□□□□□ -1.61
PMS1-204ENST00000409823 PRO0628Q9UI54 55 aa4.98□□□□□ -1.61
PMS1-204ENST00000409823 PMAIP1Q13794 54 aa4.98□□□□□ -1.61
PMS1-204ENST00000409823 KRTAP4-8A0A0G2JLE6 195 aa4.97□□□□□ -1.61
PMS1-204ENST00000409823 KRTAP4-8Q9BYQ9 185 aa4.97□□□□□ -1.61
PMS1-204ENST00000409823 TNP1P09430 55 aa4.96□□□□□ -1.62
PMS1-204ENST00000409823 KRTAP10-12P60413 245 aa4.95□□□□□ -1.62
PMS1-204ENST00000409823 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.9□□□□□ -1.62
PMS1-204ENST00000409823 KRTAP25-1Q3LHN0 102 aa4.87□□□□□ -1.63
PMS1-204ENST00000409823 LCE3AQ5TA76 89 aa4.85□□□□□ -1.63
PMS1-204ENST00000409823 KRTAP8-1Q8IUC2 63 aa4.82□□□□□ -1.64
PMS1-204ENST00000409823 MUC12Q9UKN1 5478 aa4.82□□□□□ -1.64
PMS1-204ENST00000409823 MDN1Q9NU22 5596 aa4.76□□□□□ -1.65
PMS1-204ENST00000409823 PRAC1Q96KF2 57 aa4.73□□□□□ -1.65
PMS1-204ENST00000409823 SPRR2FQ96RM1 72 aa4.73□□□□□ -1.65
PMS1-204ENST00000409823 KRTAP19-5Q3LI72 72 aa4.72□□□□□ -1.65
PMS1-204ENST00000409823 KRTAP9-7A8MTY7 169 aa4.7□□□□□ -1.66
PMS1-204ENST00000409823 KRTAP19-7Q3SYF9 63 aa4.69□□□□□ -1.66
PMS1-204ENST00000409823 KRTAP6-3Q3LI67 103 aa4.67□□□□□ -1.66
PMS1-204ENST00000409823 KRTAP5-9P26371 169 aa4.65□□□□□ -1.66
PMS1-204ENST00000409823 KTN1-AS1Q86SY8 53 aa4.65□□□□□ -1.67
PMS1-204ENST00000409823 KRTAP23-1A1A580 65 aa4.64□□□□□ -1.67
PMS1-204ENST00000409823 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
PMS1-204ENST00000409823 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
PMS1-204ENST00000409823 MT1EP04732 61 aa4.61□□□□□ -1.67
PMS1-204ENST00000409823 SPRR2EP22531 72 aa4.52□□□□□ -1.69
PMS1-204ENST00000409823 SPRR2BP35325 72 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms