RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 ACYP2P14621 99 aa4.11□□□□□ -1.75
CXCR4-202ENST00000409817 DMAC1Q96GE9 116 aa4.1□□□□□ -1.75
CXCR4-202ENST00000409817 C7orf65Q6ZTY9 151 aa4.09□□□□□ -1.75
CXCR4-202ENST00000409817 RETNLBQ9BQ08 111 aa4.09□□□□□ -1.75
CXCR4-202ENST00000409817 FLG2Q5D862 2391 aaPredicted RBP4.09□□□□□ -1.75
CXCR4-202ENST00000409817 HSPG2P98160 4391 aa4.07□□□□□ -1.76
CXCR4-202ENST00000409817 C9orf92A6NGG3 77 aa4.07□□□□□ -1.76
CXCR4-202ENST00000409817 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
CXCR4-202ENST00000409817 RYR1P21817 5038 aa4.05□□□□□ -1.76
CXCR4-202ENST00000409817 A8MUN3 132 aa4.05□□□□□ -1.76
CXCR4-202ENST00000409817 RYR3Q15413 4870 aa4.05□□□□□ -1.76
CXCR4-202ENST00000409817 CHKB-CPT1BH3BT56 60 aa4.03□□□□□ -1.76
CXCR4-202ENST00000409817 LINC01558Q9Y6Z2 57 aa4.03□□□□□ -1.76
CXCR4-202ENST00000409817 MT1HL1P0DM35 61 aa4.02□□□□□ -1.77
CXCR4-202ENST00000409817 TNXBP22105 4242 aa4.02□□□□□ -1.77
CXCR4-202ENST00000409817 PSPHP1O15172 72 aa4.01□□□□□ -1.77
CXCR4-202ENST00000409817 ATP11AUNQ6ZP68 121 aa4□□□□□ -1.77
CXCR4-202ENST00000409817 SPINK7P58062 85 aa3.99□□□□□ -1.77
CXCR4-202ENST00000409817 Q5VV11 94 aa3.99□□□□□ -1.77
CXCR4-202ENST00000409817 PRR15LQ9BU68 103 aa3.99□□□□□ -1.77
CXCR4-202ENST00000409817 PRO0628Q9UI54 55 aa3.99□□□□□ -1.77
CXCR4-202ENST00000409817 DMBT1Q9UGM3 2413 aaPredicted RBP3.99□□□□□ -1.77
CXCR4-202ENST00000409817 RPL37P61927 97 aaKnown RBP3.98□□□□□ -1.77
CXCR4-202ENST00000409817 FAT3Q8TDW7 4589 aa3.98□□□□□ -1.77
CXCR4-202ENST00000409817 LRP1Q07954 4544 aaKnown RBP3.98□□□□□ -1.77
CXCR4-202ENST00000409817 KIAA1109Q2LD37 5005 aa3.97□□□□□ -1.77
CXCR4-202ENST00000409817 SPTSSBQ8NFR3 76 aa3.96□□□□□ -1.77
CXCR4-202ENST00000409817 BRK1Q8WUW1 75 aa3.96□□□□□ -1.77
CXCR4-202ENST00000409817 TPRXLQ17RH7 258 aa3.94□□□□□ -1.78
CXCR4-202ENST00000409817 COX6B2Q6YFQ2 88 aa3.93□□□□□ -1.78
CXCR4-202ENST00000409817 A0A1B0GU69 56 aa3.92□□□□□ -1.78
CXCR4-202ENST00000409817 A6NED7 52 aa3.91□□□□□ -1.78
CXCR4-202ENST00000409817 EPPK1P58107 5090 aaKnown RBP3.91□□□□□ -1.78
CXCR4-202ENST00000409817 CDC42SE1Q9NRR8 79 aa3.88□□□□□ -1.79
CXCR4-202ENST00000409817 MYCBP2O75592 4640 aa3.86□□□□□ -1.79
CXCR4-202ENST00000409817 UQCR11O14957 56 aa3.84□□□□□ -1.79
CXCR4-202ENST00000409817 LCA10Q71F78 164 aa3.84□□□□□ -1.79
CXCR4-202ENST00000409817 SPATA8Q6RVD6 105 aa3.81□□□□□ -1.8
CXCR4-202ENST00000409817 RBM12B-AS1Q9P1G2 102 aa3.8□□□□□ -1.8
CXCR4-202ENST00000409817 A8MU10 97 aa3.79□□□□□ -1.8
CXCR4-202ENST00000409817 MIR22HGQ0VDD5 57 aa3.79□□□□□ -1.8
CXCR4-202ENST00000409817 H1FX-AS1Q4G0G2 97 aa3.79□□□□□ -1.8
CXCR4-202ENST00000409817 S4R3F8 94 aa3.79□□□□□ -1.8
CXCR4-202ENST00000409817 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
CXCR4-202ENST00000409817 PMAIP1Q13794 54 aa3.77□□□□□ -1.81
CXCR4-202ENST00000409817 BIRC6Q9NR09 4857 aa3.76□□□□□ -1.81
CXCR4-202ENST00000409817 A0A1B0GU33 70 aa3.75□□□□□ -1.81
CXCR4-202ENST00000409817 HERC2O95714 4834 aa3.74□□□□□ -1.81
CXCR4-202ENST00000409817 ABCA13Q86UQ4 5058 aa3.72□□□□□ -1.81
CXCR4-202ENST00000409817 LRP2P98164 4655 aa3.72□□□□□ -1.81
CXCR4-202ENST00000409817 A6NN06 94 aa3.72□□□□□ -1.81
CXCR4-202ENST00000409817 MT3P25713 68 aa3.71□□□□□ -1.82
CXCR4-202ENST00000409817 CSAG1Q6PB30 78 aa3.71□□□□□ -1.82
CXCR4-202ENST00000409817 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
CXCR4-202ENST00000409817 H0YAA0 97 aa3.69□□□□□ -1.82
CXCR4-202ENST00000409817 KRTAP10-6P60371 365 aaPredicted RBP3.68□□□□□ -1.82
CXCR4-202ENST00000409817 LPAP08519 4548 aa3.67□□□□□ -1.82
CXCR4-202ENST00000409817 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
CXCR4-202ENST00000409817 K7ERS5 55 aa3.64□□□□□ -1.83
CXCR4-202ENST00000409817 MUC17Q685J3 4493 aa3.63□□□□□ -1.83
CXCR4-202ENST00000409817 KRTAP4-1Q9BYQ7 146 aa3.63□□□□□ -1.83
CXCR4-202ENST00000409817 ADM2Q7Z4H4 148 aa3.62□□□□□ -1.83
CXCR4-202ENST00000409817 M0QZ58 72 aa3.6□□□□□ -1.83
CXCR4-202ENST00000409817 P0C880 135 aa3.6□□□□□ -1.83
CXCR4-202ENST00000409817 KRTAP19-2Q3LHN2 52 aa3.59□□□□□ -1.83
CXCR4-202ENST00000409817 KRTAP13-4Q3LI77 160 aa3.57□□□□□ -1.84
CXCR4-202ENST00000409817 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
CXCR4-202ENST00000409817 PCLOQ9Y6V0 5065 aa3.55□□□□□ -1.84
CXCR4-202ENST00000409817 A0A0D9SG42 100 aa3.52□□□□□ -1.85
CXCR4-202ENST00000409817 HERC1Q15751 4861 aa3.52□□□□□ -1.85
CXCR4-202ENST00000409817 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
CXCR4-202ENST00000409817 HMCN2Q8NDA2 5059 aa3.51□□□□□ -1.85
CXCR4-202ENST00000409817 R4GN34 69 aa3.51□□□□□ -1.85
CXCR4-202ENST00000409817 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
CXCR4-202ENST00000409817 ROMO1P60602 79 aa3.47□□□□□ -1.85
CXCR4-202ENST00000409817 CRIPTQ9P021 101 aa3.47□□□□□ -1.85
CXCR4-202ENST00000409817 FLGP20930 4061 aaPredicted RBP3.46□□□□□ -1.86
CXCR4-202ENST00000409817 KRTAP12-2P59991 146 aa3.45□□□□□ -1.86
CXCR4-202ENST00000409817 SPINT4Q6UDR6 99 aa3.45□□□□□ -1.86
CXCR4-202ENST00000409817 CAMK2N1Q7Z7J9 78 aa3.43□□□□□ -1.86
CXCR4-202ENST00000409817 LINC01554Q52M75 96 aa3.41□□□□□ -1.86
CXCR4-202ENST00000409817 KRTAP25-1Q3LHN0 102 aa3.4□□□□□ -1.87
CXCR4-202ENST00000409817 MUC2Q02817 5179 aa3.39□□□□□ -1.87
CXCR4-202ENST00000409817 MT1HP80294 61 aa3.37□□□□□ -1.87
CXCR4-202ENST00000409817 M0R2T5 61 aa3.36□□□□□ -1.87
CXCR4-202ENST00000409817 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
CXCR4-202ENST00000409817 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
CXCR4-202ENST00000409817 SPRR2GQ9BYE4 73 aa3.32□□□□□ -1.88
CXCR4-202ENST00000409817 RNF213Q63HN8 5207 aa3.31□□□□□ -1.88
CXCR4-202ENST00000409817 UBR4Q5T4S7 5183 aa3.3□□□□□ -1.88
CXCR4-202ENST00000409817 KRTAP5-9P26371 169 aa3.3□□□□□ -1.88
CXCR4-202ENST00000409817 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
CXCR4-202ENST00000409817 C10orf95Q9H7T3 257 aa3.27□□□□□ -1.89
CXCR4-202ENST00000409817 FAT4Q6V0I7 4981 aa3.27□□□□□ -1.89
CXCR4-202ENST00000409817 MT2AP02795 61 aa3.26□□□□□ -1.89
CXCR4-202ENST00000409817 KRTAP10-10P60014 251 aa3.26□□□□□ -1.89
CXCR4-202ENST00000409817 MT1FP04733 61 aa3.24□□□□□ -1.89
CXCR4-202ENST00000409817 PLAC4Q8WY50 150 aa3.24□□□□□ -1.89
CXCR4-202ENST00000409817 PP632Q6XCG6 107 aa3.21□□□□□ -1.9
CXCR4-202ENST00000409817 KRTAP19-8Q3LI54 63 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms