RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 KTN1-AS1Q86SY8 53 aa3.46□□□□□ -1.86
GTF3C3-202ENST00000409364 IGKV2-30P06310 120 aa3.45□□□□□ -1.86
GTF3C3-202ENST00000409364 RETNLBQ9BQ08 111 aa3.45□□□□□ -1.86
GTF3C3-202ENST00000409364 FP248Q71RG6 208 aaPredicted RBP3.44□□□□□ -1.86
GTF3C3-202ENST00000409364 C20orf166-AS1Q96NR2 134 aa3.44□□□□□ -1.86
GTF3C3-202ENST00000409364 A8MUU9 505 aa3.44□□□□□ -1.86
GTF3C3-202ENST00000409364 C9orf92A6NGG3 77 aa3.43□□□□□ -1.86
GTF3C3-202ENST00000409364 A8MUN3 132 aa3.43□□□□□ -1.86
GTF3C3-202ENST00000409364 FLG2Q5D862 2391 aaPredicted RBP3.43□□□□□ -1.86
GTF3C3-202ENST00000409364 PKHD1L1Q86WI1 4243 aa3.42□□□□□ -1.86
GTF3C3-202ENST00000409364 PSPHP1O15172 72 aa3.42□□□□□ -1.86
GTF3C3-202ENST00000409364 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
GTF3C3-202ENST00000409364 HERC2O95714 4834 aa3.42□□□□□ -1.86
GTF3C3-202ENST00000409364 DMBT1Q9UGM3 2413 aaPredicted RBP3.42□□□□□ -1.86
GTF3C3-202ENST00000409364 IGKV2D-30A0A075B6S6 120 aa3.41□□□□□ -1.86
GTF3C3-202ENST00000409364 HRES1P13985 223 aa3.41□□□□□ -1.86
GTF3C3-202ENST00000409364 ACYP2P14621 99 aa3.41□□□□□ -1.86
GTF3C3-202ENST00000409364 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
GTF3C3-202ENST00000409364 COA5Q86WW8 74 aa3.41□□□□□ -1.86
GTF3C3-202ENST00000409364 MT1HL1P0DM35 61 aa3.4□□□□□ -1.87
GTF3C3-202ENST00000409364 C7orf65Q6ZTY9 151 aa3.4□□□□□ -1.87
GTF3C3-202ENST00000409364 LRP1Q07954 4544 aaKnown RBP3.4□□□□□ -1.87
GTF3C3-202ENST00000409364 Q1T7F1 81 aa3.39□□□□□ -1.87
GTF3C3-202ENST00000409364 LCA10Q71F78 164 aa3.39□□□□□ -1.87
GTF3C3-202ENST00000409364 MPLKIPQ8TAP9 179 aa3.39□□□□□ -1.87
GTF3C3-202ENST00000409364 DMAC1Q96GE9 116 aa3.39□□□□□ -1.87
GTF3C3-202ENST00000409364 ATP11AUNQ6ZP68 121 aa3.37□□□□□ -1.87
GTF3C3-202ENST00000409364 TNXBP22105 4242 aa3.37□□□□□ -1.87
GTF3C3-202ENST00000409364 ABCA13Q86UQ4 5058 aa3.37□□□□□ -1.87
GTF3C3-202ENST00000409364 FAT3Q8TDW7 4589 aa3.36□□□□□ -1.87
GTF3C3-202ENST00000409364 CHKB-CPT1BH3BT56 60 aa3.35□□□□□ -1.87
GTF3C3-202ENST00000409364 SPINK7P58062 85 aa3.35□□□□□ -1.87
GTF3C3-202ENST00000409364 MYCBP2O75592 4640 aa3.35□□□□□ -1.87
GTF3C3-202ENST00000409364 KRTAP10-6P60371 365 aaPredicted RBP3.33□□□□□ -1.88
GTF3C3-202ENST00000409364 RPL37P61927 97 aaKnown RBP3.33□□□□□ -1.88
GTF3C3-202ENST00000409364 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
GTF3C3-202ENST00000409364 LINC01558Q9Y6Z2 57 aa3.32□□□□□ -1.88
GTF3C3-202ENST00000409364 TPRXLQ17RH7 258 aa3.31□□□□□ -1.88
GTF3C3-202ENST00000409364 LINC01554Q52M75 96 aa3.3□□□□□ -1.88
GTF3C3-202ENST00000409364 KRTAP3-1Q9BYR8 98 aa3.3□□□□□ -1.88
GTF3C3-202ENST00000409364 PRR15LQ9BU68 103 aa3.29□□□□□ -1.88
GTF3C3-202ENST00000409364 COX6B2Q6YFQ2 88 aa3.28□□□□□ -1.88
GTF3C3-202ENST00000409364 SPTSSBQ8NFR3 76 aa3.28□□□□□ -1.88
GTF3C3-202ENST00000409364 PCLOQ9Y6V0 5065 aa3.28□□□□□ -1.88
GTF3C3-202ENST00000409364 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
GTF3C3-202ENST00000409364 Q5VV11 94 aa3.27□□□□□ -1.89
GTF3C3-202ENST00000409364 A0A1B0GU69 56 aa3.24□□□□□ -1.89
GTF3C3-202ENST00000409364 KRTAP23-1A1A580 65 aa3.22□□□□□ -1.89
GTF3C3-202ENST00000409364 A6NED7 52 aa3.22□□□□□ -1.89
GTF3C3-202ENST00000409364 A6NN06 94 aa3.21□□□□□ -1.9
GTF3C3-202ENST00000409364 PRAC1Q96KF2 57 aa3.21□□□□□ -1.9
GTF3C3-202ENST00000409364 HERC1Q15751 4861 aa3.19□□□□□ -1.9
GTF3C3-202ENST00000409364 H1FX-AS1Q4G0G2 97 aa3.18□□□□□ -1.9
GTF3C3-202ENST00000409364 CDC42SE1Q9NRR8 79 aa3.18□□□□□ -1.9
GTF3C3-202ENST00000409364 LRP2P98164 4655 aa3.18□□□□□ -1.9
GTF3C3-202ENST00000409364 UQCR11O14957 56 aa3.17□□□□□ -1.9
GTF3C3-202ENST00000409364 S4R3F8 94 aa3.16□□□□□ -1.9
GTF3C3-202ENST00000409364 SPATA8Q6RVD6 105 aa3.14□□□□□ -1.91
GTF3C3-202ENST00000409364 LPAP08519 4548 aa3.13□□□□□ -1.91
GTF3C3-202ENST00000409364 MIR22HGQ0VDD5 57 aa3.13□□□□□ -1.91
GTF3C3-202ENST00000409364 A0A1B0GU33 70 aa3.12□□□□□ -1.91
GTF3C3-202ENST00000409364 A8MU10 97 aa3.12□□□□□ -1.91
GTF3C3-202ENST00000409364 ADM2Q7Z4H4 148 aa3.12□□□□□ -1.91
GTF3C3-202ENST00000409364 CSAG1Q6PB30 78 aa3.11□□□□□ -1.91
GTF3C3-202ENST00000409364 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
GTF3C3-202ENST00000409364 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
GTF3C3-202ENST00000409364 KRTAP4-1Q9BYQ7 146 aa3.08□□□□□ -1.92
GTF3C3-202ENST00000409364 K7ERS5 55 aa3.07□□□□□ -1.92
GTF3C3-202ENST00000409364 KRTAP15-1Q3LI76 137 aa3.05□□□□□ -1.92
GTF3C3-202ENST00000409364 CAMK2N1Q7Z7J9 78 aa3.05□□□□□ -1.92
GTF3C3-202ENST00000409364 H0YAA0 97 aa3.05□□□□□ -1.92
GTF3C3-202ENST00000409364 ROMO1P60602 79 aa3.05□□□□□ -1.92
GTF3C3-202ENST00000409364 KRTAP19-2Q3LHN2 52 aa3.02□□□□□ -1.93
GTF3C3-202ENST00000409364 MUC17Q685J3 4493 aa3.02□□□□□ -1.93
GTF3C3-202ENST00000409364 P0C880 135 aa3.02□□□□□ -1.93
GTF3C3-202ENST00000409364 M0QZ58 72 aa2.99□□□□□ -1.93
GTF3C3-202ENST00000409364 UBR4Q5T4S7 5183 aa2.97□□□□□ -1.93
GTF3C3-202ENST00000409364 KRTAP13-4Q3LI77 160 aa2.97□□□□□ -1.93
GTF3C3-202ENST00000409364 A0A0D9SG42 100 aa2.95□□□□□ -1.94
GTF3C3-202ENST00000409364 R4GN34 69 aa2.93□□□□□ -1.94
GTF3C3-202ENST00000409364 MUC2Q02817 5179 aa2.93□□□□□ -1.94
GTF3C3-202ENST00000409364 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
GTF3C3-202ENST00000409364 FLGP20930 4061 aaPredicted RBP2.92□□□□□ -1.94
GTF3C3-202ENST00000409364 RNF213Q63HN8 5207 aa2.91□□□□□ -1.94
GTF3C3-202ENST00000409364 LCE1AQ5T7P2 110 aa2.91□□□□□ -1.94
GTF3C3-202ENST00000409364 CRIPTQ9P021 101 aa2.89□□□□□ -1.95
GTF3C3-202ENST00000409364 KRTAP12-1P59990 96 aa2.88□□□□□ -1.95
GTF3C3-202ENST00000409364 SPINT4Q6UDR6 99 aa2.88□□□□□ -1.95
GTF3C3-202ENST00000409364 M0R2T5 61 aa2.87□□□□□ -1.95
GTF3C3-202ENST00000409364 KRTAP12-2P59991 146 aa2.87□□□□□ -1.95
GTF3C3-202ENST00000409364 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
GTF3C3-202ENST00000409364 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
GTF3C3-202ENST00000409364 MT1HP80294 61 aa2.85□□□□□ -1.95
GTF3C3-202ENST00000409364 KRTAP2-2Q9BYT5 123 aa2.85□□□□□ -1.95
GTF3C3-202ENST00000409364 FAT4Q6V0I7 4981 aa2.85□□□□□ -1.95
GTF3C3-202ENST00000409364 NDUFAF8A1L188 74 aa2.84□□□□□ -1.96
GTF3C3-202ENST00000409364 KRTAP25-1Q3LHN0 102 aa2.79□□□□□ -1.96
GTF3C3-202ENST00000409364 KRTAP10-10P60014 251 aa2.78□□□□□ -1.96
GTF3C3-202ENST00000409364 SPRR2GQ9BYE4 73 aa2.78□□□□□ -1.96
GTF3C3-202ENST00000409364 MT2AP02795 61 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms