RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 SEC61GP60059 68 aa9.9□□□□□ -0.82
LIMS2-204ENST00000409286 LRP2P98164 4655 aa9.89□□□□□ -0.83
LIMS2-204ENST00000409286 A8MU10 97 aa9.88□□□□□ -0.83
LIMS2-204ENST00000409286 LPAP08519 4548 aa9.83□□□□□ -0.84
LIMS2-204ENST00000409286 UQCR11O14957 56 aa9.82□□□□□ -0.84
LIMS2-204ENST00000409286 SEC61BP60468 96 aaKnown RBP9.78□□□□□ -0.84
LIMS2-204ENST00000409286 SPATA8Q6RVD6 105 aa9.78□□□□□ -0.84
LIMS2-204ENST00000409286 H1FX-AS1Q4G0G2 97 aa9.77□□□□□ -0.84
LIMS2-204ENST00000409286 S4R3F8 94 aa9.77□□□□□ -0.84
LIMS2-204ENST00000409286 KRTAP3-3Q9BYR6 98 aa9.76□□□□□ -0.85
LIMS2-204ENST00000409286 RBM12B-AS1Q9P1G2 102 aa9.75□□□□□ -0.85
LIMS2-204ENST00000409286 MIR22HGQ0VDD5 57 aa9.74□□□□□ -0.85
LIMS2-204ENST00000409286 PMAIP1Q13794 54 aa9.66□□□□□ -0.86
LIMS2-204ENST00000409286 A0A1B0GU33 70 aa9.64□□□□□ -0.87
LIMS2-204ENST00000409286 MUC17Q685J3 4493 aa9.64□□□□□ -0.87
LIMS2-204ENST00000409286 PCLOQ9Y6V0 5065 aa9.62□□□□□ -0.87
LIMS2-204ENST00000409286 A6NN06 94 aa9.57□□□□□ -0.88
LIMS2-204ENST00000409286 H0YAA0 97 aa9.53□□□□□ -0.88
LIMS2-204ENST00000409286 KRTAP10-6P60371 365 aaPredicted RBP9.53□□□□□ -0.88
LIMS2-204ENST00000409286 KRTAP4-1Q9BYQ7 146 aa9.53□□□□□ -0.88
LIMS2-204ENST00000409286 CSAG1Q6PB30 78 aa9.52□□□□□ -0.89
LIMS2-204ENST00000409286 KRTAP3-2Q9BYR7 98 aa9.51□□□□□ -0.89
LIMS2-204ENST00000409286 HMCN2Q8NDA2 5059 aa9.43□□□□□ -0.9
LIMS2-204ENST00000409286 HERC1Q15751 4861 aa9.43□□□□□ -0.9
LIMS2-204ENST00000409286 ADM2Q7Z4H4 148 aa9.39□□□□□ -0.91
LIMS2-204ENST00000409286 P0C880 135 aa9.37□□□□□ -0.91
LIMS2-204ENST00000409286 KTN1-AS1Q86SY8 53 aa9.37□□□□□ -0.91
LIMS2-204ENST00000409286 KRTAP19-2Q3LHN2 52 aa9.35□□□□□ -0.91
LIMS2-204ENST00000409286 KRTAP13-4Q3LI77 160 aa9.3□□□□□ -0.92
LIMS2-204ENST00000409286 K7ERS5 55 aa9.24□□□□□ -0.93
LIMS2-204ENST00000409286 M0QZ58 72 aa9.2□□□□□ -0.94
LIMS2-204ENST00000409286 FLGP20930 4061 aaPredicted RBP9.18□□□□□ -0.94
LIMS2-204ENST00000409286 A0A0D9SG42 100 aa9.16□□□□□ -0.94
LIMS2-204ENST00000409286 MUC2Q02817 5179 aa9.11□□□□□ -0.95
LIMS2-204ENST00000409286 R4GN34 69 aa9.02□□□□□ -0.97
LIMS2-204ENST00000409286 PRAC1Q96KF2 57 aa9□□□□□ -0.97
LIMS2-204ENST00000409286 LCE2CQ5TA81 110 aa8.98□□□□□ -0.97
LIMS2-204ENST00000409286 KRTAP12-1P59990 96 aa8.97□□□□□ -0.97
LIMS2-204ENST00000409286 KRTAP12-2P59991 146 aa8.97□□□□□ -0.97
LIMS2-204ENST00000409286 RNF213Q63HN8 5207 aa8.95□□□□□ -0.98
LIMS2-204ENST00000409286 LORP23490 312 aaPredicted RBP8.94□□□□□ -0.98
LIMS2-204ENST00000409286 SPINT4Q6UDR6 99 aa8.93□□□□□ -0.98
LIMS2-204ENST00000409286 ROMO1P60602 79 aa8.91□□□□□ -0.98
LIMS2-204ENST00000409286 UBR4Q5T4S7 5183 aa8.91□□□□□ -0.98
LIMS2-204ENST00000409286 LINC01554Q52M75 96 aa8.86□□□□□ -0.99
LIMS2-204ENST00000409286 CRIPTQ9P021 101 aa8.84□□□□□ -0.99
LIMS2-204ENST00000409286 MT1HP80294 61 aa8.76□□□□□ -1.01
LIMS2-204ENST00000409286 FAT4Q6V0I7 4981 aa8.73□□□□□ -1.01
LIMS2-204ENST00000409286 KRTAP25-1Q3LHN0 102 aa8.73□□□□□ -1.01
LIMS2-204ENST00000409286 M0R2T5 61 aa8.72□□□□□ -1.01
LIMS2-204ENST00000409286 SPRR2GQ9BYE4 73 aa8.54□□□□□ -1.04
LIMS2-204ENST00000409286 MT2AP02795 61 aa8.51□□□□□ -1.05
LIMS2-204ENST00000409286 KRTAP9-8Q9BYQ0 159 aa8.5□□□□□ -1.05
LIMS2-204ENST00000409286 CAMK2N1Q7Z7J9 78 aa8.49□□□□□ -1.05
LIMS2-204ENST00000409286 C10orf95Q9H7T3 257 aa8.49□□□□□ -1.05
LIMS2-204ENST00000409286 MT1FP04733 61 aa8.46□□□□□ -1.05
LIMS2-204ENST00000409286 KRTAP10-10P60014 251 aa8.46□□□□□ -1.05
LIMS2-204ENST00000409286 KRTAP19-1Q8IUB9 90 aa8.46□□□□□ -1.05
LIMS2-204ENST00000409286 PLAC4Q8WY50 150 aa8.35□□□□□ -1.07
LIMS2-204ENST00000409286 KRTAP19-8Q3LI54 63 aa8.27□□□□□ -1.09
LIMS2-204ENST00000409286 LCE2AQ5TA79 106 aaPredicted RBP8.22□□□□□ -1.09
LIMS2-204ENST00000409286 KRTAP9-3Q9BYQ3 159 aa8.19□□□□□ -1.1
LIMS2-204ENST00000409286 TNP1P09430 55 aa8.15□□□□□ -1.1
LIMS2-204ENST00000409286 PP632Q6XCG6 107 aa8.14□□□□□ -1.11
LIMS2-204ENST00000409286 MT1BP07438 61 aa8.1□□□□□ -1.11
LIMS2-204ENST00000409286 KRTAP23-1A1A580 65 aa8.06□□□□□ -1.12
LIMS2-204ENST00000409286 KRTAP10-5P60370 271 aa7.92□□□□□ -1.14
LIMS2-204ENST00000409286 MT1XP80297 61 aa7.92□□□□□ -1.14
LIMS2-204ENST00000409286 LCE2BO14633 110 aa7.89□□□□□ -1.15
LIMS2-204ENST00000409286 KRTAP15-1Q3LI76 137 aa7.83□□□□□ -1.16
LIMS2-204ENST00000409286 PRO2289Q9P1D8 64 aa7.81□□□□□ -1.16
LIMS2-204ENST00000409286 LCE3AQ5TA76 89 aa7.73□□□□□ -1.17
LIMS2-204ENST00000409286 USH2AO75445 5202 aa7.64□□□□□ -1.19
LIMS2-204ENST00000409286 KRTAP10-12P60413 245 aa7.63□□□□□ -1.19
LIMS2-204ENST00000409286 KRTAP10-7P60409 375 aaPredicted RBP7.63□□□□□ -1.19
LIMS2-204ENST00000409286 KRTAP8-1Q8IUC2 63 aa7.61□□□□□ -1.19
LIMS2-204ENST00000409286 KRTAP12-3P60328 96 aa7.42□□□□□ -1.22
LIMS2-204ENST00000409286 LCE2DQ5TA82 110 aaPredicted RBP7.42□□□□□ -1.22
LIMS2-204ENST00000409286 SSPOA2VEC9 5147 aa7.37□□□□□ -1.23
LIMS2-204ENST00000409286 KRTAP19-6Q3LI70 58 aa7.36□□□□□ -1.23
LIMS2-204ENST00000409286 SPRR5A0A1B0GTR4 108 aa7.35□□□□□ -1.23
LIMS2-204ENST00000409286 NDUFAF8A1L188 74 aa7.35□□□□□ -1.23
LIMS2-204ENST00000409286 LUZP6Q538Z0 58 aa7.28□□□□□ -1.24
LIMS2-204ENST00000409286 KRTAP19-5Q3LI72 72 aa7.25□□□□□ -1.25
LIMS2-204ENST00000409286 KRTAP4-8A0A0G2JLE6 195 aa7.22□□□□□ -1.25
LIMS2-204ENST00000409286 KRTAP4-8Q9BYQ9 185 aa7.22□□□□□ -1.25
LIMS2-204ENST00000409286 KMT2DO14686 5537 aa7.15□□□□□ -1.27
LIMS2-204ENST00000409286 FSIP2Q5CZC0 6907 aa7.09□□□□□ -1.27
LIMS2-204ENST00000409286 KRTAP19-7Q3SYF9 63 aa7.06□□□□□ -1.28
LIMS2-204ENST00000409286 H3BS24 57 aa7.03□□□□□ -1.28
LIMS2-204ENST00000409286 LCE3CQ5T5A8 94 aa6.96□□□□□ -1.29
LIMS2-204ENST00000409286 FCGBPQ9Y6R7 5405 aaPredicted RBP6.96□□□□□ -1.3
LIMS2-204ENST00000409286 KRTAP19-4Q3LI73 84 aa6.95□□□□□ -1.3
LIMS2-204ENST00000409286 KRTAP9-2Q9BYQ4 174 aa6.94□□□□□ -1.3
LIMS2-204ENST00000409286 MT1EP04732 61 aa6.93□□□□□ -1.3
LIMS2-204ENST00000409286 MT1LQ93083 61 aa6.84□□□□□ -1.31
LIMS2-204ENST00000409286 CRCT1Q9UGL9 99 aa6.76□□□□□ -1.33
LIMS2-204ENST00000409286 KRTAP4-7Q9BYR0 210 aa6.66□□□□□ -1.34
LIMS2-204ENST00000409286 MACF1Q9UPN3 7388 aaKnown RBP6.63□□□□□ -1.35
LIMS2-204ENST00000409286 KRTAP9-6A8MVA2 160 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms