RNA–Protein interactions for RNA: ENST00000408028.6

SLC8A1-209, Transcript of solute carrier family 8 member A1, humanhuman

TSL 5 BASIC

Gene SLC8A1, Length 2,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8A1-209ENST00000408028 XP32Q5T750 250 aa4.76□□□□□ -1.65
SLC8A1-209ENST00000408028 NOTCH2NLQ7Z3S9 236 aa4.76□□□□□ -1.65
SLC8A1-209ENST00000408028 RETNLBQ9BQ08 111 aa4.75□□□□□ -1.65
SLC8A1-209ENST00000408028 KRTAP16-1A8MUX0 517 aa4.74□□□□□ -1.65
SLC8A1-209ENST00000408028 C20orf166-AS1Q96NR2 134 aa4.74□□□□□ -1.65
SLC8A1-209ENST00000408028 A8MUU9 505 aa4.72□□□□□ -1.65
SLC8A1-209ENST00000408028 ADM2Q7Z4H4 148 aa4.72□□□□□ -1.65
SLC8A1-209ENST00000408028 IGKV2-30P06310 120 aa4.71□□□□□ -1.66
SLC8A1-209ENST00000408028 RPL37P61927 97 aaKnown RBP4.69□□□□□ -1.66
SLC8A1-209ENST00000408028 HMCN2Q8NDA2 5059 aa4.68□□□□□ -1.66
SLC8A1-209ENST00000408028 MUC17Q685J3 4493 aa4.67□□□□□ -1.66
SLC8A1-209ENST00000408028 SEC61BP60468 96 aaKnown RBP4.66□□□□□ -1.66
SLC8A1-209ENST00000408028 H3BS24 57 aa4.65□□□□□ -1.67
SLC8A1-209ENST00000408028 CSAG1Q6PB30 78 aa4.65□□□□□ -1.67
SLC8A1-209ENST00000408028 HERC1Q15751 4861 aa4.64□□□□□ -1.67
SLC8A1-209ENST00000408028 C9orf92A6NGG3 77 aa4.63□□□□□ -1.67
SLC8A1-209ENST00000408028 IGKV2D-30A0A075B6S6 120 aa4.62□□□□□ -1.67
SLC8A1-209ENST00000408028 LPAP08519 4548 aa4.54□□□□□ -1.68
SLC8A1-209ENST00000408028 KRTAP25-1Q3LHN0 102 aa4.54□□□□□ -1.68
SLC8A1-209ENST00000408028 A0A0A0MQY5 61 aa4.54□□□□□ -1.68
SLC8A1-209ENST00000408028 LRP2P98164 4655 aa4.5□□□□□ -1.69
SLC8A1-209ENST00000408028 ROMO1P60602 79 aa4.49□□□□□ -1.69
SLC8A1-209ENST00000408028 H0YAA0 97 aa4.49□□□□□ -1.69
SLC8A1-209ENST00000408028 A0A1B0GU33 70 aa4.47□□□□□ -1.69
SLC8A1-209ENST00000408028 K7ERS5 55 aa4.47□□□□□ -1.69
SLC8A1-209ENST00000408028 KRTAP4-1Q9BYQ7 146 aa4.45□□□□□ -1.7
SLC8A1-209ENST00000408028 H1FX-AS1Q4G0G2 97 aa4.44□□□□□ -1.7
SLC8A1-209ENST00000408028 KRTAP19-2Q3LHN2 52 aa4.41□□□□□ -1.7
SLC8A1-209ENST00000408028 UBR4Q5T4S7 5183 aa4.38□□□□□ -1.71
SLC8A1-209ENST00000408028 COX6B2Q6YFQ2 88 aa4.37□□□□□ -1.71
SLC8A1-209ENST00000408028 RNF213Q63HN8 5207 aa4.36□□□□□ -1.71
SLC8A1-209ENST00000408028 LCE2CQ5TA81 110 aa4.34□□□□□ -1.71
SLC8A1-209ENST00000408028 KRTAP3-1Q9BYR8 98 aa4.33□□□□□ -1.72
SLC8A1-209ENST00000408028 P0C880 135 aa4.31□□□□□ -1.72
SLC8A1-209ENST00000408028 LCE2AQ5TA79 106 aaPredicted RBP4.28□□□□□ -1.73
SLC8A1-209ENST00000408028 CRIPTQ9P021 101 aa4.27□□□□□ -1.73
SLC8A1-209ENST00000408028 FLGP20930 4061 aaPredicted RBP4.26□□□□□ -1.73
SLC8A1-209ENST00000408028 MT1HP80294 61 aa4.26□□□□□ -1.73
SLC8A1-209ENST00000408028 SPINT4Q6UDR6 99 aa4.25□□□□□ -1.73
SLC8A1-209ENST00000408028 MUC2Q02817 5179 aa4.23□□□□□ -1.73
SLC8A1-209ENST00000408028 S4R3F8 94 aa4.22□□□□□ -1.73
SLC8A1-209ENST00000408028 KRTAP10-6P60371 365 aaPredicted RBP4.2□□□□□ -1.74
SLC8A1-209ENST00000408028 FAT4Q6V0I7 4981 aa4.2□□□□□ -1.74
SLC8A1-209ENST00000408028 KRTAP15-1Q3LI76 137 aa4.18□□□□□ -1.74
SLC8A1-209ENST00000408028 KRTAP3-3Q9BYR6 98 aa4.16□□□□□ -1.74
SLC8A1-209ENST00000408028 LORP23490 312 aaPredicted RBP4.15□□□□□ -1.75
SLC8A1-209ENST00000408028 KRTAP13-4Q3LI77 160 aa4.15□□□□□ -1.75
SLC8A1-209ENST00000408028 KRTAP3-2Q9BYR7 98 aa4.15□□□□□ -1.75
SLC8A1-209ENST00000408028 A0A0D9SG42 100 aa4.14□□□□□ -1.75
SLC8A1-209ENST00000408028 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
SLC8A1-209ENST00000408028 M0R2T5 61 aa4.11□□□□□ -1.75
SLC8A1-209ENST00000408028 C10orf95Q9H7T3 257 aa4.1□□□□□ -1.75
SLC8A1-209ENST00000408028 KRTAP9-8Q9BYQ0 159 aa4.09□□□□□ -1.75
SLC8A1-209ENST00000408028 KRTAP12-2P59991 146 aa4.05□□□□□ -1.76
SLC8A1-209ENST00000408028 KRTAP12-1P59990 96 aa4.04□□□□□ -1.76
SLC8A1-209ENST00000408028 MT2AP02795 61 aa4.04□□□□□ -1.76
SLC8A1-209ENST00000408028 M0QZ58 72 aa4.04□□□□□ -1.76
SLC8A1-209ENST00000408028 LCE2DQ5TA82 110 aaPredicted RBP4.02□□□□□ -1.77
SLC8A1-209ENST00000408028 MT1FP04733 61 aa3.99□□□□□ -1.77
SLC8A1-209ENST00000408028 SPRR2GQ9BYE4 73 aa3.96□□□□□ -1.78
SLC8A1-209ENST00000408028 KRTAP9-3Q9BYQ3 159 aa3.96□□□□□ -1.78
SLC8A1-209ENST00000408028 KRTAP10-10P60014 251 aa3.95□□□□□ -1.78
SLC8A1-209ENST00000408028 KRTAP19-8Q3LI54 63 aa3.89□□□□□ -1.79
SLC8A1-209ENST00000408028 PLAC4Q8WY50 150 aa3.89□□□□□ -1.79
SLC8A1-209ENST00000408028 KRTAP19-1Q8IUB9 90 aa3.89□□□□□ -1.79
SLC8A1-209ENST00000408028 LUZP6Q538Z0 58 aa3.88□□□□□ -1.79
SLC8A1-209ENST00000408028 R4GN34 69 aa3.85□□□□□ -1.79
SLC8A1-209ENST00000408028 PP632Q6XCG6 107 aa3.84□□□□□ -1.79
SLC8A1-209ENST00000408028 LCE2BO14633 110 aa3.82□□□□□ -1.8
SLC8A1-209ENST00000408028 KRTAP9-2Q9BYQ4 174 aa3.82□□□□□ -1.8
SLC8A1-209ENST00000408028 MT1BP07438 61 aa3.77□□□□□ -1.81
SLC8A1-209ENST00000408028 KRTAP19-6Q3LI70 58 aa3.74□□□□□ -1.81
SLC8A1-209ENST00000408028 KRTAP23-1A1A580 65 aa3.68□□□□□ -1.82
SLC8A1-209ENST00000408028 CRCT1Q9UGL9 99 aa3.68□□□□□ -1.82
SLC8A1-209ENST00000408028 USH2AO75445 5202 aa3.67□□□□□ -1.82
SLC8A1-209ENST00000408028 KRTAP10-5P60370 271 aa3.67□□□□□ -1.82
SLC8A1-209ENST00000408028 CAMK2N1Q7Z7J9 78 aa3.66□□□□□ -1.82
SLC8A1-209ENST00000408028 PRO2289Q9P1D8 64 aa3.66□□□□□ -1.82
SLC8A1-209ENST00000408028 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
SLC8A1-209ENST00000408028 SSPOA2VEC9 5147 aa3.62□□□□□ -1.83
SLC8A1-209ENST00000408028 KRTAP9-6A0A140TA67 174 aa3.61□□□□□ -1.83
SLC8A1-209ENST00000408028 MT1XP80297 61 aa3.61□□□□□ -1.83
SLC8A1-209ENST00000408028 TNP1P09430 55 aa3.59□□□□□ -1.83
SLC8A1-209ENST00000408028 KRTAP10-12P60413 245 aa3.49□□□□□ -1.85
SLC8A1-209ENST00000408028 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
SLC8A1-209ENST00000408028 INE1O15225 51 aa3.44□□□□□ -1.86
SLC8A1-209ENST00000408028 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.41□□□□□ -1.86
SLC8A1-209ENST00000408028 KRTAP10-7P60409 375 aaPredicted RBP3.4□□□□□ -1.87
SLC8A1-209ENST00000408028 FSIP2Q5CZC0 6907 aa3.38□□□□□ -1.87
SLC8A1-209ENST00000408028 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
SLC8A1-209ENST00000408028 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
SLC8A1-209ENST00000408028 KRTAP8-1Q8IUC2 63 aa3.3□□□□□ -1.88
SLC8A1-209ENST00000408028 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
SLC8A1-209ENST00000408028 KRTAP9-7A8MTY7 169 aa3.27□□□□□ -1.89
SLC8A1-209ENST00000408028 MACF1Q9UPN3 7388 aaKnown RBP3.26□□□□□ -1.89
SLC8A1-209ENST00000408028 KRTAP4-8A0A0G2JLE6 195 aa3.26□□□□□ -1.89
SLC8A1-209ENST00000408028 KRTAP4-8Q9BYQ9 185 aa3.26□□□□□ -1.89
SLC8A1-209ENST00000408028 KRTAP19-4Q3LI73 84 aa3.25□□□□□ -1.89
SLC8A1-209ENST00000408028 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
SLC8A1-209ENST00000408028 MT1EP04732 61 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms