RNA–Protein interactions for RNA: ENST00000407417.7

NFIA-208, Transcript of nuclear factor I A, humanhuman

TSL 2 BASIC

Gene NFIA, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-208ENST00000407417 LINC00304Q8N9R0 145 aa4.82□□□□□ -1.64
NFIA-208ENST00000407417 IGKV2D-30A0A075B6S6 120 aa4.82□□□□□ -1.64
NFIA-208ENST00000407417 PSORS1C2Q9UIG4 136 aa4.81□□□□□ -1.64
NFIA-208ENST00000407417 ANAPC11Q9NYG5 84 aa4.79□□□□□ -1.64
NFIA-208ENST00000407417 P0C880 135 aa4.78□□□□□ -1.64
NFIA-208ENST00000407417 H0YAA0 97 aa4.77□□□□□ -1.65
NFIA-208ENST00000407417 MT1HL1P0DM35 61 aa4.77□□□□□ -1.65
NFIA-208ENST00000407417 LCE2AQ5TA79 106 aaPredicted RBP4.77□□□□□ -1.65
NFIA-208ENST00000407417 SPINK6Q6UWN8 80 aa4.77□□□□□ -1.65
NFIA-208ENST00000407417 K7ERS5 55 aa4.76□□□□□ -1.65
NFIA-208ENST00000407417 SSBP3-AS1Q7Z2R9 100 aa4.75□□□□□ -1.65
NFIA-208ENST00000407417 LCE2CQ5TA81 110 aa4.72□□□□□ -1.65
NFIA-208ENST00000407417 A0A1B0GU33 70 aa4.72□□□□□ -1.65
NFIA-208ENST00000407417 HMCN2Q8NDA2 5059 aa4.71□□□□□ -1.65
NFIA-208ENST00000407417 TNXBP22105 4242 aa4.71□□□□□ -1.66
NFIA-208ENST00000407417 KRTAP16-1A8MUX0 517 aa4.7□□□□□ -1.66
NFIA-208ENST00000407417 KRTAP10-8P60410 259 aa4.7□□□□□ -1.66
NFIA-208ENST00000407417 H1FX-AS1Q4G0G2 97 aa4.69□□□□□ -1.66
NFIA-208ENST00000407417 A0A0A0MQY5 61 aa4.68□□□□□ -1.66
NFIA-208ENST00000407417 KRTAP1-4P0C5Y4 121 aa4.68□□□□□ -1.66
NFIA-208ENST00000407417 C20orf166-AS1Q96NR2 134 aa4.66□□□□□ -1.66
NFIA-208ENST00000407417 SPINK1P00995 79 aa4.62□□□□□ -1.67
NFIA-208ENST00000407417 KRTAP15-1Q3LI76 137 aa4.62□□□□□ -1.67
NFIA-208ENST00000407417 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
NFIA-208ENST00000407417 COX6B2Q6YFQ2 88 aa4.61□□□□□ -1.67
NFIA-208ENST00000407417 UBR4Q5T4S7 5183 aa4.61□□□□□ -1.67
NFIA-208ENST00000407417 KRTAP13-2Q52LG2 175 aa4.6□□□□□ -1.67
NFIA-208ENST00000407417 TYMSOSQ8TAI1 123 aa4.6□□□□□ -1.67
NFIA-208ENST00000407417 NDUFAF8A1L188 74 aa4.58□□□□□ -1.68
NFIA-208ENST00000407417 LORP23490 312 aaPredicted RBP4.58□□□□□ -1.68
NFIA-208ENST00000407417 LRP2P98164 4655 aa4.57□□□□□ -1.68
NFIA-208ENST00000407417 RPL37P61927 97 aaKnown RBP4.55□□□□□ -1.68
NFIA-208ENST00000407417 TPRXLQ17RH7 258 aa4.52□□□□□ -1.69
NFIA-208ENST00000407417 CRIPTQ9P021 101 aa4.52□□□□□ -1.69
NFIA-208ENST00000407417 LPAP08519 4548 aa4.52□□□□□ -1.69
NFIA-208ENST00000407417 RNF213Q63HN8 5207 aa4.47□□□□□ -1.69
NFIA-208ENST00000407417 RPS29P62273 56 aaKnown RBP4.46□□□□□ -1.69
NFIA-208ENST00000407417 KRTAP3-1Q9BYR8 98 aa4.46□□□□□ -1.7
NFIA-208ENST00000407417 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
NFIA-208ENST00000407417 KRTAP10-6P60371 365 aaPredicted RBP4.38□□□□□ -1.71
NFIA-208ENST00000407417 C10orf95Q9H7T3 257 aa4.35□□□□□ -1.71
NFIA-208ENST00000407417 XP32Q5T750 250 aa4.34□□□□□ -1.71
NFIA-208ENST00000407417 S4R3F8 94 aa4.34□□□□□ -1.71
NFIA-208ENST00000407417 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
NFIA-208ENST00000407417 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
NFIA-208ENST00000407417 MUC2Q02817 5179 aa4.33□□□□□ -1.72
NFIA-208ENST00000407417 KRTAP13-4Q3LI77 160 aa4.32□□□□□ -1.72
NFIA-208ENST00000407417 MUC17Q685J3 4493 aa4.32□□□□□ -1.72
NFIA-208ENST00000407417 KRTAP9-2Q9BYQ4 174 aa4.3□□□□□ -1.72
NFIA-208ENST00000407417 A0A0D9SG42 100 aa4.28□□□□□ -1.72
NFIA-208ENST00000407417 C9orf92A6NGG3 77 aa4.28□□□□□ -1.72
NFIA-208ENST00000407417 SEC61BP60468 96 aaKnown RBP4.27□□□□□ -1.73
NFIA-208ENST00000407417 KRTAP9-6A0A140TA67 174 aa4.25□□□□□ -1.73
NFIA-208ENST00000407417 KRTAP4-1Q9BYQ7 146 aa4.25□□□□□ -1.73
NFIA-208ENST00000407417 KRTAP12-2P59991 146 aa4.24□□□□□ -1.73
NFIA-208ENST00000407417 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
NFIA-208ENST00000407417 FAT4Q6V0I7 4981 aa4.23□□□□□ -1.73
NFIA-208ENST00000407417 M0QZ58 72 aa4.21□□□□□ -1.74
NFIA-208ENST00000407417 PLAC4Q8WY50 150 aa4.21□□□□□ -1.74
NFIA-208ENST00000407417 KRTAP19-2Q3LHN2 52 aa4.12□□□□□ -1.75
NFIA-208ENST00000407417 PP632Q6XCG6 107 aa4.11□□□□□ -1.75
NFIA-208ENST00000407417 CAMK2N1Q7Z7J9 78 aa4.1□□□□□ -1.75
NFIA-208ENST00000407417 MT1HP80294 61 aa4.05□□□□□ -1.76
NFIA-208ENST00000407417 CRCT1Q9UGL9 99 aa4.03□□□□□ -1.76
NFIA-208ENST00000407417 KRTAP4-8Q9BYQ9 185 aa3.99□□□□□ -1.77
NFIA-208ENST00000407417 FSIP2Q5CZC0 6907 aa3.98□□□□□ -1.77
NFIA-208ENST00000407417 FLGP20930 4061 aaPredicted RBP3.97□□□□□ -1.77
NFIA-208ENST00000407417 M0R2T5 61 aa3.97□□□□□ -1.77
NFIA-208ENST00000407417 PRO2289Q9P1D8 64 aa3.96□□□□□ -1.78
NFIA-208ENST00000407417 SPRR5A0A1B0GTR4 108 aa3.94□□□□□ -1.78
NFIA-208ENST00000407417 KRTAP23-1A1A580 65 aa3.94□□□□□ -1.78
NFIA-208ENST00000407417 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.93□□□□□ -1.78
NFIA-208ENST00000407417 R4GN34 69 aa3.91□□□□□ -1.78
NFIA-208ENST00000407417 INE1O15225 51 aa3.87□□□□□ -1.79
NFIA-208ENST00000407417 KRTAP9-8Q9BYQ0 159 aa3.84□□□□□ -1.79
NFIA-208ENST00000407417 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
NFIA-208ENST00000407417 LCE3BQ5TA77 95 aa3.82□□□□□ -1.8
NFIA-208ENST00000407417 MT2AP02795 61 aa3.8□□□□□ -1.8
NFIA-208ENST00000407417 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
NFIA-208ENST00000407417 KRTAP19-1Q8IUB9 90 aa3.79□□□□□ -1.8
NFIA-208ENST00000407417 MT1FP04733 61 aa3.77□□□□□ -1.81
NFIA-208ENST00000407417 KRTAP10-10P60014 251 aa3.75□□□□□ -1.81
NFIA-208ENST00000407417 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
NFIA-208ENST00000407417 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
NFIA-208ENST00000407417 USH2AO75445 5202 aa3.72□□□□□ -1.81
NFIA-208ENST00000407417 TNP1P09430 55 aa3.72□□□□□ -1.81
NFIA-208ENST00000407417 KRTAP9-3Q9BYQ3 159 aa3.72□□□□□ -1.81
NFIA-208ENST00000407417 SSPOA2VEC9 5147 aa3.67□□□□□ -1.82
NFIA-208ENST00000407417 KRTAP4-8A0A0G2JLE6 195 aa3.66□□□□□ -1.82
NFIA-208ENST00000407417 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
NFIA-208ENST00000407417 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
NFIA-208ENST00000407417 SYNE2Q8WXH0 6885 aaKnown RBP3.54□□□□□ -1.84
NFIA-208ENST00000407417 MACF1Q9UPN3 7388 aaKnown RBP3.54□□□□□ -1.84
NFIA-208ENST00000407417 KRTAP19-6Q3LI70 58 aa3.53□□□□□ -1.84
NFIA-208ENST00000407417 KRTAP4-7Q9BYR0 210 aa3.53□□□□□ -1.84
NFIA-208ENST00000407417 LCE4AQ5TA78 99 aa3.51□□□□□ -1.85
NFIA-208ENST00000407417 SPRR2GQ9BYE4 73 aa3.49□□□□□ -1.85
NFIA-208ENST00000407417 MT1BP07438 61 aa3.48□□□□□ -1.85
NFIA-208ENST00000407417 KRTAP19-8Q3LI54 63 aa3.46□□□□□ -1.86
NFIA-208ENST00000407417 KRTAP4-9Q9BYQ8 210 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms