RNA–Protein interactions for RNA: ENST00000403683.1

HIST2H3A-201, Transcript of histone cluster 2 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST2H3A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3A-201ENST00000403683 SPTSSBQ8NFR3 76 aa12.38□□□□□ -0.43
HIST2H3A-201ENST00000403683 RPS28P62857 69 aaKnown RBP12.37□□□□□ -0.43
HIST2H3A-201ENST00000403683 LCE2CQ5TA81 110 aa12.35□□□□□ -0.43
HIST2H3A-201ENST00000403683 KRTAP3-3Q9BYR6 98 aa12.3□□□□□ -0.44
HIST2H3A-201ENST00000403683 CSAG1Q6PB30 78 aa12.28□□□□□ -0.44
HIST2H3A-201ENST00000403683 FLGP20930 4061 aaPredicted RBP12.27□□□□□ -0.45
HIST2H3A-201ENST00000403683 M0R2T5 61 aa12.2□□□□□ -0.46
HIST2H3A-201ENST00000403683 FAT4Q6V0I7 4981 aa12.2□□□□□ -0.46
HIST2H3A-201ENST00000403683 SMIM26A0A096LP01 95 aa12.19□□□□□ -0.46
HIST2H3A-201ENST00000403683 MT1HP80294 61 aa12.17□□□□□ -0.46
HIST2H3A-201ENST00000403683 SEC61GP60059 68 aa12.03□□□□□ -0.48
HIST2H3A-201ENST00000403683 V9GYY9 64 aa12.03□□□□□ -0.48
HIST2H3A-201ENST00000403683 LINC01558Q9Y6Z2 57 aa12□□□□□ -0.49
HIST2H3A-201ENST00000403683 Q1T7F1 81 aa11.99□□□□□ -0.49
HIST2H3A-201ENST00000403683 A0A1B0GU69 56 aa11.97□□□□□ -0.49
HIST2H3A-201ENST00000403683 ADM2Q7Z4H4 148 aa11.93□□□□□ -0.5
HIST2H3A-201ENST00000403683 PRR15LQ9BU68 103 aa11.92□□□□□ -0.5
HIST2H3A-201ENST00000403683 PSPHP1O15172 72 aa11.87□□□□□ -0.51
HIST2H3A-201ENST00000403683 H0YAA0 97 aa11.87□□□□□ -0.51
HIST2H3A-201ENST00000403683 LCE2AQ5TA79 106 aaPredicted RBP11.81□□□□□ -0.52
HIST2H3A-201ENST00000403683 KRTAP3-2Q9BYR7 98 aa11.8□□□□□ -0.52
HIST2H3A-201ENST00000403683 P0C880 135 aa11.78□□□□□ -0.52
HIST2H3A-201ENST00000403683 KRTAP10-6P60371 365 aaPredicted RBP11.78□□□□□ -0.52
HIST2H3A-201ENST00000403683 Q5VV11 94 aa11.68□□□□□ -0.54
HIST2H3A-201ENST00000403683 LORP23490 312 aaPredicted RBP11.68□□□□□ -0.54
HIST2H3A-201ENST00000403683 A0A1B0GU33 70 aa11.67□□□□□ -0.54
HIST2H3A-201ENST00000403683 KRTAP9-8Q9BYQ0 159 aa11.67□□□□□ -0.54
HIST2H3A-201ENST00000403683 MT2AP02795 61 aa11.63□□□□□ -0.55
HIST2H3A-201ENST00000403683 KRTAP10-10P60014 251 aa11.63□□□□□ -0.55
HIST2H3A-201ENST00000403683 MT1FP04733 61 aa11.55□□□□□ -0.56
HIST2H3A-201ENST00000403683 R4GN34 69 aa11.55□□□□□ -0.56
HIST2H3A-201ENST00000403683 UQCR11O14957 56 aa11.55□□□□□ -0.56
HIST2H3A-201ENST00000403683 A6NED7 52 aa11.52□□□□□ -0.56
HIST2H3A-201ENST00000403683 M0QZ58 72 aa11.51□□□□□ -0.57
HIST2H3A-201ENST00000403683 CRIPTQ9P021 101 aa11.49□□□□□ -0.57
HIST2H3A-201ENST00000403683 SPATA8Q6RVD6 105 aa11.49□□□□□ -0.57
HIST2H3A-201ENST00000403683 KRTAP13-4Q3LI77 160 aa11.43□□□□□ -0.58
HIST2H3A-201ENST00000403683 MIR22HGQ0VDD5 57 aa11.4□□□□□ -0.58
HIST2H3A-201ENST00000403683 LINC01554Q52M75 96 aa11.37□□□□□ -0.59
HIST2H3A-201ENST00000403683 A0A0D9SG42 100 aa11.33□□□□□ -0.6
HIST2H3A-201ENST00000403683 A8MU10 97 aa11.27□□□□□ -0.6
HIST2H3A-201ENST00000403683 SPRR2GQ9BYE4 73 aa11.27□□□□□ -0.61
HIST2H3A-201ENST00000403683 KRTAP9-3Q9BYQ3 159 aa11.25□□□□□ -0.61
HIST2H3A-201ENST00000403683 KRTAP19-1Q8IUB9 90 aa11.24□□□□□ -0.61
HIST2H3A-201ENST00000403683 BRK1Q8WUW1 75 aa11.22□□□□□ -0.61
HIST2H3A-201ENST00000403683 CDC42SE1Q9NRR8 79 aa11.21□□□□□ -0.61
HIST2H3A-201ENST00000403683 SPINT4Q6UDR6 99 aa11.09□□□□□ -0.63
HIST2H3A-201ENST00000403683 A6NN06 94 aa11□□□□□ -0.65
HIST2H3A-201ENST00000403683 K7ERS5 55 aa11□□□□□ -0.65
HIST2H3A-201ENST00000403683 KRTAP12-1P59990 96 aa10.99□□□□□ -0.65
HIST2H3A-201ENST00000403683 LCE2BO14633 110 aa10.98□□□□□ -0.65
HIST2H3A-201ENST00000403683 KRTAP19-8Q3LI54 63 aa10.98□□□□□ -0.65
HIST2H3A-201ENST00000403683 PLAC4Q8WY50 150 aa10.98□□□□□ -0.65
HIST2H3A-201ENST00000403683 KRTAP12-2P59991 146 aa10.97□□□□□ -0.65
HIST2H3A-201ENST00000403683 KRTAP9-2Q9BYQ4 174 aa10.95□□□□□ -0.66
HIST2H3A-201ENST00000403683 MT1BP07438 61 aa10.86□□□□□ -0.67
HIST2H3A-201ENST00000403683 LCE2DQ5TA82 110 aaPredicted RBP10.85□□□□□ -0.67
HIST2H3A-201ENST00000403683 CAMK2N1Q7Z7J9 78 aa10.82□□□□□ -0.68
HIST2H3A-201ENST00000403683 PRO0628Q9UI54 55 aa10.77□□□□□ -0.69
HIST2H3A-201ENST00000403683 USH2AO75445 5202 aa10.69□□□□□ -0.7
HIST2H3A-201ENST00000403683 FSIP2Q5CZC0 6907 aa10.64□□□□□ -0.71
HIST2H3A-201ENST00000403683 PMAIP1Q13794 54 aa10.6□□□□□ -0.71
HIST2H3A-201ENST00000403683 SVIPQ8NHG7 77 aa10.6□□□□□ -0.71
HIST2H3A-201ENST00000403683 PRO2289Q9P1D8 64 aa10.49□□□□□ -0.73
HIST2H3A-201ENST00000403683 MT1XP80297 61 aa10.47□□□□□ -0.73
HIST2H3A-201ENST00000403683 KRTAP10-5P60370 271 aa10.44□□□□□ -0.74
HIST2H3A-201ENST00000403683 ROMO1P60602 79 aa10.43□□□□□ -0.74
HIST2H3A-201ENST00000403683 C10orf95Q9H7T3 257 aa10.41□□□□□ -0.74
HIST2H3A-201ENST00000403683 KRTAP9-6A0A140TA67 174 aa10.41□□□□□ -0.74
HIST2H3A-201ENST00000403683 KRTAP19-6Q3LI70 58 aa10.37□□□□□ -0.75
HIST2H3A-201ENST00000403683 CRCT1Q9UGL9 99 aa10.37□□□□□ -0.75
HIST2H3A-201ENST00000403683 SSPOA2VEC9 5147 aa10.36□□□□□ -0.75
HIST2H3A-201ENST00000403683 TNP1P09430 55 aa10.22□□□□□ -0.77
HIST2H3A-201ENST00000403683 KRTAP25-1Q3LHN0 102 aa10.13□□□□□ -0.79
HIST2H3A-201ENST00000403683 KRTAP10-7P60409 375 aaPredicted RBP10.06□□□□□ -0.8
HIST2H3A-201ENST00000403683 FCGBPQ9Y6R7 5405 aaPredicted RBP10.02□□□□□ -0.81
HIST2H3A-201ENST00000403683 KTN1-AS1Q86SY8 53 aa10.02□□□□□ -0.81
HIST2H3A-201ENST00000403683 KRTAP10-12P60413 245 aa9.92□□□□□ -0.82
HIST2H3A-201ENST00000403683 PRAC1Q96KF2 57 aa9.92□□□□□ -0.82
HIST2H3A-201ENST00000403683 LCE3AQ5TA76 89 aa9.78□□□□□ -0.84
HIST2H3A-201ENST00000403683 KRTAP4-8A0A0G2JLE6 195 aa9.74□□□□□ -0.85
HIST2H3A-201ENST00000403683 KRTAP4-8Q9BYQ9 185 aa9.74□□□□□ -0.85
HIST2H3A-201ENST00000403683 PP632Q6XCG6 107 aa9.74□□□□□ -0.85
HIST2H3A-201ENST00000403683 KRTAP23-1A1A580 65 aa9.72□□□□□ -0.85
HIST2H3A-201ENST00000403683 KMT2DO14686 5537 aa9.69□□□□□ -0.86
HIST2H3A-201ENST00000403683 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.67□□□□□ -0.86
HIST2H3A-201ENST00000403683 KRTAP8-1Q8IUC2 63 aa9.58□□□□□ -0.88
HIST2H3A-201ENST00000403683 MACF1Q9UPN3 7388 aaKnown RBP9.55□□□□□ -0.88
HIST2H3A-201ENST00000403683 KRTAP19-5Q3LI72 72 aa9.45□□□□□ -0.9
HIST2H3A-201ENST00000403683 SYNE2Q8WXH0 6885 aaKnown RBP9.44□□□□□ -0.9
HIST2H3A-201ENST00000403683 KRTAP12-3P60328 96 aa9.41□□□□□ -0.9
HIST2H3A-201ENST00000403683 KRTAP9-7A8MTY7 169 aa9.4□□□□□ -0.9
HIST2H3A-201ENST00000403683 KRTAP19-7Q3SYF9 63 aa9.32□□□□□ -0.92
HIST2H3A-201ENST00000403683 SPRR2FQ96RM1 72 aa9.28□□□□□ -0.92
HIST2H3A-201ENST00000403683 MT1EP04732 61 aa9.2□□□□□ -0.94
HIST2H3A-201ENST00000403683 KRTAP15-1Q3LI76 137 aa9.16□□□□□ -0.94
HIST2H3A-201ENST00000403683 KRTAP5-9P26371 169 aa9.13□□□□□ -0.95
HIST2H3A-201ENST00000403683 KRTAP6-3Q3LI67 103 aa9.13□□□□□ -0.95
HIST2H3A-201ENST00000403683 MUC12Q9UKN1 5478 aa9.04□□□□□ -0.96
HIST2H3A-201ENST00000403683 MT1LQ93083 61 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms