RNA–Protein interactions for RNA: ENST00000403562.5

PRKAR1B-203, Transcript of protein kinase cAMP-dependent type I regulatory subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1B, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1B-203ENST00000403562 XP32Q5T750 250 aa12.88□□□□□ -0.35
PRKAR1B-203ENST00000403562 COX6B2Q6YFQ2 88 aa12.86□□□□□ -0.35
PRKAR1B-203ENST00000403562 HMCN2Q8NDA2 5059 aa12.84□□□□□ -0.35
PRKAR1B-203ENST00000403562 PMAIP1Q13794 54 aa12.82□□□□□ -0.36
PRKAR1B-203ENST00000403562 LPAP08519 4548 aa12.8□□□□□ -0.36
PRKAR1B-203ENST00000403562 SEC61GP60059 68 aa12.78□□□□□ -0.36
PRKAR1B-203ENST00000403562 UQCR11O14957 56 aa12.77□□□□□ -0.37
PRKAR1B-203ENST00000403562 SPATA8Q6RVD6 105 aa12.73□□□□□ -0.37
PRKAR1B-203ENST00000403562 TPRXLQ17RH7 258 aa12.71□□□□□ -0.37
PRKAR1B-203ENST00000403562 MIR22HGQ0VDD5 57 aa12.68□□□□□ -0.38
PRKAR1B-203ENST00000403562 A6NN06 94 aa12.66□□□□□ -0.38
PRKAR1B-203ENST00000403562 LRP2P98164 4655 aa12.66□□□□□ -0.38
PRKAR1B-203ENST00000403562 KTN1-AS1Q86SY8 53 aa12.5□□□□□ -0.41
PRKAR1B-203ENST00000403562 A0A1B0GU33 70 aa12.43□□□□□ -0.42
PRKAR1B-203ENST00000403562 S4R3F8 94 aa12.42□□□□□ -0.42
PRKAR1B-203ENST00000403562 H1FX-AS1Q4G0G2 97 aa12.41□□□□□ -0.42
PRKAR1B-203ENST00000403562 KRTAP3-3Q9BYR6 98 aa12.41□□□□□ -0.42
PRKAR1B-203ENST00000403562 H0YAA0 97 aa12.37□□□□□ -0.43
PRKAR1B-203ENST00000403562 UBR4Q5T4S7 5183 aa12.34□□□□□ -0.43
PRKAR1B-203ENST00000403562 MUC17Q685J3 4493 aa12.33□□□□□ -0.44
PRKAR1B-203ENST00000403562 RBM12B-AS1Q9P1G2 102 aa12.27□□□□□ -0.44
PRKAR1B-203ENST00000403562 SEC61BP60468 96 aaKnown RBP12.25□□□□□ -0.45
PRKAR1B-203ENST00000403562 KRTAP10-6P60371 365 aaPredicted RBP12.19□□□□□ -0.46
PRKAR1B-203ENST00000403562 KRTAP3-2Q9BYR7 98 aa12.14□□□□□ -0.47
PRKAR1B-203ENST00000403562 MUC2Q02817 5179 aa12.14□□□□□ -0.47
PRKAR1B-203ENST00000403562 KRTAP4-1Q9BYQ7 146 aa12.13□□□□□ -0.47
PRKAR1B-203ENST00000403562 RNF213Q63HN8 5207 aa12.11□□□□□ -0.47
PRKAR1B-203ENST00000403562 CSAG1Q6PB30 78 aa12.05□□□□□ -0.48
PRKAR1B-203ENST00000403562 K7ERS5 55 aa11.99□□□□□ -0.49
PRKAR1B-203ENST00000403562 P0C880 135 aa11.98□□□□□ -0.49
PRKAR1B-203ENST00000403562 ADM2Q7Z4H4 148 aa11.96□□□□□ -0.49
PRKAR1B-203ENST00000403562 KRTAP13-4Q3LI77 160 aa11.96□□□□□ -0.5
PRKAR1B-203ENST00000403562 PRAC1Q96KF2 57 aa11.94□□□□□ -0.5
PRKAR1B-203ENST00000403562 A0A0D9SG42 100 aa11.8□□□□□ -0.52
PRKAR1B-203ENST00000403562 KRTAP19-2Q3LHN2 52 aa11.74□□□□□ -0.53
PRKAR1B-203ENST00000403562 M0QZ58 72 aa11.73□□□□□ -0.53
PRKAR1B-203ENST00000403562 FAT4Q6V0I7 4981 aa11.67□□□□□ -0.54
PRKAR1B-203ENST00000403562 LCE2CQ5TA81 110 aa11.64□□□□□ -0.55
PRKAR1B-203ENST00000403562 ROMO1P60602 79 aa11.6□□□□□ -0.55
PRKAR1B-203ENST00000403562 KRTAP12-2P59991 146 aa11.55□□□□□ -0.56
PRKAR1B-203ENST00000403562 KRTAP12-1P59990 96 aa11.54□□□□□ -0.56
PRKAR1B-203ENST00000403562 FLGP20930 4061 aaPredicted RBP11.51□□□□□ -0.57
PRKAR1B-203ENST00000403562 KRTAP25-1Q3LHN0 102 aa11.5□□□□□ -0.57
PRKAR1B-203ENST00000403562 LINC01554Q52M75 96 aa11.48□□□□□ -0.57
PRKAR1B-203ENST00000403562 R4GN34 69 aa11.48□□□□□ -0.57
PRKAR1B-203ENST00000403562 SPINT4Q6UDR6 99 aa11.47□□□□□ -0.57
PRKAR1B-203ENST00000403562 MT1HP80294 61 aa11.42□□□□□ -0.58
PRKAR1B-203ENST00000403562 LORP23490 312 aaPredicted RBP11.32□□□□□ -0.6
PRKAR1B-203ENST00000403562 LCE2AQ5TA79 106 aaPredicted RBP11.32□□□□□ -0.6
PRKAR1B-203ENST00000403562 CRIPTQ9P021 101 aa11.3□□□□□ -0.6
PRKAR1B-203ENST00000403562 M0R2T5 61 aa11.22□□□□□ -0.61
PRKAR1B-203ENST00000403562 C10orf95Q9H7T3 257 aa11.03□□□□□ -0.64
PRKAR1B-203ENST00000403562 KRTAP9-8Q9BYQ0 159 aa10.94□□□□□ -0.66
PRKAR1B-203ENST00000403562 MT2AP02795 61 aa10.85□□□□□ -0.67
PRKAR1B-203ENST00000403562 CAMK2N1Q7Z7J9 78 aa10.84□□□□□ -0.67
PRKAR1B-203ENST00000403562 MT1FP04733 61 aa10.79□□□□□ -0.68
PRKAR1B-203ENST00000403562 KRTAP10-10P60014 251 aa10.71□□□□□ -0.69
PRKAR1B-203ENST00000403562 SPRR2GQ9BYE4 73 aa10.71□□□□□ -0.69
PRKAR1B-203ENST00000403562 KRTAP19-1Q8IUB9 90 aa10.6□□□□□ -0.71
PRKAR1B-203ENST00000403562 KRTAP9-3Q9BYQ3 159 aa10.56□□□□□ -0.72
PRKAR1B-203ENST00000403562 PLAC4Q8WY50 150 aa10.51□□□□□ -0.73
PRKAR1B-203ENST00000403562 PP632Q6XCG6 107 aa10.5□□□□□ -0.73
PRKAR1B-203ENST00000403562 TNP1P09430 55 aa10.43□□□□□ -0.74
PRKAR1B-203ENST00000403562 LCE2DQ5TA82 110 aaPredicted RBP10.42□□□□□ -0.74
PRKAR1B-203ENST00000403562 LCE2BO14633 110 aa10.36□□□□□ -0.75
PRKAR1B-203ENST00000403562 KRTAP15-1Q3LI76 137 aa10.36□□□□□ -0.75
PRKAR1B-203ENST00000403562 KRTAP19-8Q3LI54 63 aa10.31□□□□□ -0.76
PRKAR1B-203ENST00000403562 KRTAP23-1A1A580 65 aa10.3□□□□□ -0.76
PRKAR1B-203ENST00000403562 KRTAP9-2Q9BYQ4 174 aa10.3□□□□□ -0.76
PRKAR1B-203ENST00000403562 USH2AO75445 5202 aa10.23□□□□□ -0.77
PRKAR1B-203ENST00000403562 FSIP2Q5CZC0 6907 aa10.15□□□□□ -0.78
PRKAR1B-203ENST00000403562 MT1BP07438 61 aa10.12□□□□□ -0.79
PRKAR1B-203ENST00000403562 SSPOA2VEC9 5147 aa10□□□□□ -0.81
PRKAR1B-203ENST00000403562 KRTAP10-5P60370 271 aa9.95□□□□□ -0.82
PRKAR1B-203ENST00000403562 MT1XP80297 61 aa9.95□□□□□ -0.82
PRKAR1B-203ENST00000403562 NDUFAF8A1L188 74 aa9.87□□□□□ -0.83
PRKAR1B-203ENST00000403562 LCE3AQ5TA76 89 aa9.86□□□□□ -0.83
PRKAR1B-203ENST00000403562 CRCT1Q9UGL9 99 aa9.84□□□□□ -0.83
PRKAR1B-203ENST00000403562 KRTAP19-6Q3LI70 58 aa9.8□□□□□ -0.84
PRKAR1B-203ENST00000403562 H3BS24 57 aa9.78□□□□□ -0.84
PRKAR1B-203ENST00000403562 PRO2289Q9P1D8 64 aa9.77□□□□□ -0.85
PRKAR1B-203ENST00000403562 KRTAP8-1Q8IUC2 63 aa9.69□□□□□ -0.86
PRKAR1B-203ENST00000403562 KRTAP10-12P60413 245 aa9.68□□□□□ -0.86
PRKAR1B-203ENST00000403562 KRTAP9-6A0A140TA67 174 aa9.66□□□□□ -0.86
PRKAR1B-203ENST00000403562 FCGBPQ9Y6R7 5405 aaPredicted RBP9.63□□□□□ -0.87
PRKAR1B-203ENST00000403562 LUZP6Q538Z0 58 aa9.6□□□□□ -0.87
PRKAR1B-203ENST00000403562 KRTAP10-7P60409 375 aaPredicted RBP9.59□□□□□ -0.87
PRKAR1B-203ENST00000403562 SPRR5A0A1B0GTR4 108 aa9.58□□□□□ -0.88
PRKAR1B-203ENST00000403562 KRTAP12-3P60328 96 aa9.44□□□□□ -0.9
PRKAR1B-203ENST00000403562 MACF1Q9UPN3 7388 aaKnown RBP9.25□□□□□ -0.93
PRKAR1B-203ENST00000403562 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.15□□□□□ -0.95
PRKAR1B-203ENST00000403562 KRTAP19-5Q3LI72 72 aa9.15□□□□□ -0.95
PRKAR1B-203ENST00000403562 KMT2DO14686 5537 aa9.14□□□□□ -0.95
PRKAR1B-203ENST00000403562 KRTAP4-8A0A0G2JLE6 195 aa9.04□□□□□ -0.96
PRKAR1B-203ENST00000403562 KRTAP4-8Q9BYQ9 185 aa9.04□□□□□ -0.96
PRKAR1B-203ENST00000403562 SYNE2Q8WXH0 6885 aaKnown RBP9.04□□□□□ -0.96
PRKAR1B-203ENST00000403562 KRTAP19-7Q3SYF9 63 aa8.87□□□□□ -0.99
PRKAR1B-203ENST00000403562 LCE3CQ5T5A8 94 aa8.87□□□□□ -0.99
PRKAR1B-203ENST00000403562 A0A0A0MQY5 61 aa8.82□□□□□ -1
PRKAR1B-203ENST00000403562 KRTAP9-7A8MTY7 169 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms