RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 KRTAP10-8P60410 259 aa5.05□□□□□ -1.6
CBX1-203ENST00000402583 ATP11AUNQ6ZP68 121 aa5.05□□□□□ -1.6
CBX1-203ENST00000402583 APOBP04114 4563 aaKnown RBP5.04□□□□□ -1.6
CBX1-203ENST00000402583 PKHD1P08F94 4074 aa5.04□□□□□ -1.6
CBX1-203ENST00000402583 RYR2Q92736 4967 aa5.02□□□□□ -1.61
CBX1-203ENST00000402583 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
CBX1-203ENST00000402583 LCA10Q71F78 164 aa5.02□□□□□ -1.61
CBX1-203ENST00000402583 PKHD1L1Q86WI1 4243 aa5.01□□□□□ -1.61
CBX1-203ENST00000402583 SPINK7P58062 85 aa5□□□□□ -1.61
CBX1-203ENST00000402583 SEC61GP60059 68 aa5□□□□□ -1.61
CBX1-203ENST00000402583 PMAIP1Q13794 54 aa4.99□□□□□ -1.61
CBX1-203ENST00000402583 UQCR11O14957 56 aa4.96□□□□□ -1.62
CBX1-203ENST00000402583 A8MU10 97 aa4.95□□□□□ -1.62
CBX1-203ENST00000402583 RPL37P61927 97 aaKnown RBP4.94□□□□□ -1.62
CBX1-203ENST00000402583 COX6B2Q6YFQ2 88 aa4.94□□□□□ -1.62
CBX1-203ENST00000402583 KRTAP4-11Q9BYQ6 195 aa4.94□□□□□ -1.62
CBX1-203ENST00000402583 FAT1Q14517 4588 aa4.94□□□□□ -1.62
CBX1-203ENST00000402583 SPATA8Q6RVD6 105 aa4.93□□□□□ -1.62
CBX1-203ENST00000402583 MIR22HGQ0VDD5 57 aa4.92□□□□□ -1.62
CBX1-203ENST00000402583 A6NN06 94 aa4.89□□□□□ -1.63
CBX1-203ENST00000402583 MT1HL1P0DM35 61 aa4.87□□□□□ -1.63
CBX1-203ENST00000402583 KTN1-AS1Q86SY8 53 aa4.87□□□□□ -1.63
CBX1-203ENST00000402583 KMT2CQ8NEZ4 4911 aaKnown RBP4.86□□□□□ -1.63
CBX1-203ENST00000402583 KRTAP4-2Q9BYR5 136 aa4.85□□□□□ -1.63
CBX1-203ENST00000402583 FLG2Q5D862 2391 aaPredicted RBP4.85□□□□□ -1.63
CBX1-203ENST00000402583 HSPG2P98160 4391 aa4.84□□□□□ -1.63
CBX1-203ENST00000402583 FAT3Q8TDW7 4589 aa4.83□□□□□ -1.64
CBX1-203ENST00000402583 TNXBP22105 4242 aa4.83□□□□□ -1.64
CBX1-203ENST00000402583 RYR3Q15413 4870 aa4.82□□□□□ -1.64
CBX1-203ENST00000402583 TPRXLQ17RH7 258 aa4.82□□□□□ -1.64
CBX1-203ENST00000402583 KRTAP17-1Q9BYP8 105 aa4.81□□□□□ -1.64
CBX1-203ENST00000402583 A0A1B0GU33 70 aa4.8□□□□□ -1.64
CBX1-203ENST00000402583 H1FX-AS1Q4G0G2 97 aa4.8□□□□□ -1.64
CBX1-203ENST00000402583 RYR1P21817 5038 aa4.78□□□□□ -1.64
CBX1-203ENST00000402583 KRTAP4-5Q9BYR2 181 aa4.78□□□□□ -1.64
CBX1-203ENST00000402583 S4R3F8 94 aa4.78□□□□□ -1.64
CBX1-203ENST00000402583 RBM12B-AS1Q9P1G2 102 aa4.74□□□□□ -1.65
CBX1-203ENST00000402583 LRP1Q07954 4544 aaKnown RBP4.73□□□□□ -1.65
CBX1-203ENST00000402583 H0YAA0 97 aa4.73□□□□□ -1.65
CBX1-203ENST00000402583 K7ERS5 55 aa4.72□□□□□ -1.65
CBX1-203ENST00000402583 EPPK1P58107 5090 aaKnown RBP4.68□□□□□ -1.66
CBX1-203ENST00000402583 SEC61BP60468 96 aaKnown RBP4.68□□□□□ -1.66
CBX1-203ENST00000402583 A0A0A0MQY5 61 aa4.67□□□□□ -1.66
CBX1-203ENST00000402583 BIRC6Q9NR09 4857 aa4.65□□□□□ -1.66
CBX1-203ENST00000402583 CSAG1Q6PB30 78 aa4.65□□□□□ -1.67
CBX1-203ENST00000402583 KIAA1109Q2LD37 5005 aa4.65□□□□□ -1.67
CBX1-203ENST00000402583 KRTAP10-6P60371 365 aaPredicted RBP4.64□□□□□ -1.67
CBX1-203ENST00000402583 DMBT1Q9UGM3 2413 aaPredicted RBP4.62□□□□□ -1.67
CBX1-203ENST00000402583 ADM2Q7Z4H4 148 aa4.59□□□□□ -1.67
CBX1-203ENST00000402583 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
CBX1-203ENST00000402583 MYCBP2O75592 4640 aa4.58□□□□□ -1.68
CBX1-203ENST00000402583 P0C880 135 aa4.55□□□□□ -1.68
CBX1-203ENST00000402583 M0QZ58 72 aa4.54□□□□□ -1.68
CBX1-203ENST00000402583 A0A0D9SG42 100 aa4.53□□□□□ -1.68
CBX1-203ENST00000402583 KRTAP13-4Q3LI77 160 aa4.53□□□□□ -1.68
CBX1-203ENST00000402583 ROMO1P60602 79 aa4.51□□□□□ -1.69
CBX1-203ENST00000402583 PCLOQ9Y6V0 5065 aa4.51□□□□□ -1.69
CBX1-203ENST00000402583 LINC01554Q52M75 96 aa4.48□□□□□ -1.69
CBX1-203ENST00000402583 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
CBX1-203ENST00000402583 HERC2O95714 4834 aa4.44□□□□□ -1.7
CBX1-203ENST00000402583 SPINT4Q6UDR6 99 aa4.43□□□□□ -1.7
CBX1-203ENST00000402583 KRTAP4-1Q9BYQ7 146 aa4.43□□□□□ -1.7
CBX1-203ENST00000402583 LRP2P98164 4655 aa4.43□□□□□ -1.7
CBX1-203ENST00000402583 R4GN34 69 aa4.42□□□□□ -1.7
CBX1-203ENST00000402583 LPAP08519 4548 aa4.41□□□□□ -1.7
CBX1-203ENST00000402583 KRTAP12-1P59990 96 aa4.41□□□□□ -1.7
CBX1-203ENST00000402583 KRTAP12-2P59991 146 aa4.41□□□□□ -1.7
CBX1-203ENST00000402583 MUC17Q685J3 4493 aa4.4□□□□□ -1.71
CBX1-203ENST00000402583 ABCA13Q86UQ4 5058 aa4.39□□□□□ -1.71
CBX1-203ENST00000402583 KRTAP19-2Q3LHN2 52 aa4.36□□□□□ -1.71
CBX1-203ENST00000402583 CRIPTQ9P021 101 aa4.34□□□□□ -1.71
CBX1-203ENST00000402583 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
CBX1-203ENST00000402583 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
CBX1-203ENST00000402583 CAMK2N1Q7Z7J9 78 aa4.2□□□□□ -1.74
CBX1-203ENST00000402583 HERC1Q15751 4861 aa4.15□□□□□ -1.75
CBX1-203ENST00000402583 HMCN2Q8NDA2 5059 aa4.15□□□□□ -1.75
CBX1-203ENST00000402583 M0R2T5 61 aa4.14□□□□□ -1.75
CBX1-203ENST00000402583 FLGP20930 4061 aaPredicted RBP4.13□□□□□ -1.75
CBX1-203ENST00000402583 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
CBX1-203ENST00000402583 KRTAP9-8Q9BYQ0 159 aa4.1□□□□□ -1.75
CBX1-203ENST00000402583 MT1HP80294 61 aa4.09□□□□□ -1.75
CBX1-203ENST00000402583 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
CBX1-203ENST00000402583 UBR4Q5T4S7 5183 aa4.08□□□□□ -1.76
CBX1-203ENST00000402583 PLAC4Q8WY50 150 aa4.07□□□□□ -1.76
CBX1-203ENST00000402583 SPRR2GQ9BYE4 73 aa4.07□□□□□ -1.76
CBX1-203ENST00000402583 TNP1P09430 55 aa4.04□□□□□ -1.76
CBX1-203ENST00000402583 KRTAP10-10P60014 251 aa4.01□□□□□ -1.77
CBX1-203ENST00000402583 MUC2Q02817 5179 aa4.01□□□□□ -1.77
CBX1-203ENST00000402583 MT2AP02795 61 aa3.99□□□□□ -1.77
CBX1-203ENST00000402583 MT3P25713 68 aa3.97□□□□□ -1.77
CBX1-203ENST00000402583 MT1FP04733 61 aa3.96□□□□□ -1.78
CBX1-203ENST00000402583 RNF213Q63HN8 5207 aa3.93□□□□□ -1.78
CBX1-203ENST00000402583 KRTAP19-8Q3LI54 63 aa3.92□□□□□ -1.78
CBX1-203ENST00000402583 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
CBX1-203ENST00000402583 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
CBX1-203ENST00000402583 FAT4Q6V0I7 4981 aa3.82□□□□□ -1.8
CBX1-203ENST00000402583 MT1BP07438 61 aa3.81□□□□□ -1.8
CBX1-203ENST00000402583 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
CBX1-203ENST00000402583 PRO2289Q9P1D8 64 aa3.79□□□□□ -1.8
CBX1-203ENST00000402583 KRTAP10-5P60370 271 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms