RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 LOC101927531A0A1B0GV80 90 aa3.84□□□□□ -1.8
CSNK2A1-204ENST00000400227 TYMSOSQ8TAI1 123 aa3.84□□□□□ -1.8
CSNK2A1-204ENST00000400227 RYR3Q15413 4870 aa3.82□□□□□ -1.8
CSNK2A1-204ENST00000400227 HRES1P13985 223 aa3.82□□□□□ -1.8
CSNK2A1-204ENST00000400227 KRTAP1-4P0C5Y4 121 aa3.81□□□□□ -1.8
CSNK2A1-204ENST00000400227 PRR15LQ9BU68 103 aa3.81□□□□□ -1.8
CSNK2A1-204ENST00000400227 VPS13BQ7Z7G8 4022 aa3.81□□□□□ -1.8
CSNK2A1-204ENST00000400227 LINC00313P59037 77 aa3.8□□□□□ -1.8
CSNK2A1-204ENST00000400227 LINC01558Q9Y6Z2 57 aa3.8□□□□□ -1.8
CSNK2A1-204ENST00000400227 DYNC1H1Q14204 4646 aaKnown RBP3.79□□□□□ -1.8
CSNK2A1-204ENST00000400227 CHKB-CPT1BH3BT56 60 aa3.79□□□□□ -1.8
CSNK2A1-204ENST00000400227 A8MU10 97 aa3.77□□□□□ -1.81
CSNK2A1-204ENST00000400227 BIRC6Q9NR09 4857 aa3.76□□□□□ -1.81
CSNK2A1-204ENST00000400227 SPAG11AQ6PDA7 123 aa3.76□□□□□ -1.81
CSNK2A1-204ENST00000400227 PCLOQ9Y6V0 5065 aa3.76□□□□□ -1.81
CSNK2A1-204ENST00000400227 ACYP2P14621 99 aa3.75□□□□□ -1.81
CSNK2A1-204ENST00000400227 DMAC1Q96GE9 116 aa3.75□□□□□ -1.81
CSNK2A1-204ENST00000400227 RETNLBQ9BQ08 111 aa3.75□□□□□ -1.81
CSNK2A1-204ENST00000400227 APOBP04114 4563 aaKnown RBP3.75□□□□□ -1.81
CSNK2A1-204ENST00000400227 PKHD1L1Q86WI1 4243 aa3.74□□□□□ -1.81
CSNK2A1-204ENST00000400227 LCA10Q71F78 164 aa3.74□□□□□ -1.81
CSNK2A1-204ENST00000400227 A6NED7 52 aa3.73□□□□□ -1.81
CSNK2A1-204ENST00000400227 SPINK1P00995 79 aa3.73□□□□□ -1.81
CSNK2A1-204ENST00000400227 CDC42SE1Q9NRR8 79 aa3.72□□□□□ -1.81
CSNK2A1-204ENST00000400227 EPPK1P58107 5090 aaKnown RBP3.71□□□□□ -1.82
CSNK2A1-204ENST00000400227 SPINK7P58062 85 aa3.71□□□□□ -1.82
CSNK2A1-204ENST00000400227 PKHD1P08F94 4074 aa3.71□□□□□ -1.82
CSNK2A1-204ENST00000400227 KMT2CQ8NEZ4 4911 aaKnown RBP3.7□□□□□ -1.82
CSNK2A1-204ENST00000400227 RPS29P62273 56 aaKnown RBP3.7□□□□□ -1.82
CSNK2A1-204ENST00000400227 ATP11AUNQ6ZP68 121 aa3.7□□□□□ -1.82
CSNK2A1-204ENST00000400227 UBR4Q5T4S7 5183 aa3.7□□□□□ -1.82
CSNK2A1-204ENST00000400227 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
CSNK2A1-204ENST00000400227 LINC00304Q8N9R0 145 aa3.69□□□□□ -1.82
CSNK2A1-204ENST00000400227 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
CSNK2A1-204ENST00000400227 PMAIP1Q13794 54 aa3.68□□□□□ -1.82
CSNK2A1-204ENST00000400227 FAT1Q14517 4588 aa3.68□□□□□ -1.82
CSNK2A1-204ENST00000400227 RYR2Q92736 4967 aa3.67□□□□□ -1.82
CSNK2A1-204ENST00000400227 A6NN06 94 aa3.67□□□□□ -1.82
CSNK2A1-204ENST00000400227 KRTAP10-4P60372 401 aaPredicted RBP3.67□□□□□ -1.82
CSNK2A1-204ENST00000400227 SPTSSBQ8NFR3 76 aa3.66□□□□□ -1.82
CSNK2A1-204ENST00000400227 SMR3BP02814 79 aaPredicted RBP3.64□□□□□ -1.83
CSNK2A1-204ENST00000400227 C7orf65Q6ZTY9 151 aa3.64□□□□□ -1.83
CSNK2A1-204ENST00000400227 A8MUU9 505 aa3.63□□□□□ -1.83
CSNK2A1-204ENST00000400227 A0A1B0GU69 56 aa3.62□□□□□ -1.83
CSNK2A1-204ENST00000400227 C20orf166-AS1Q96NR2 134 aa3.62□□□□□ -1.83
CSNK2A1-204ENST00000400227 FAT3Q8TDW7 4589 aa3.62□□□□□ -1.83
CSNK2A1-204ENST00000400227 KRTAP12-2P59991 146 aa3.61□□□□□ -1.83
CSNK2A1-204ENST00000400227 KTN1-AS1Q86SY8 53 aa3.61□□□□□ -1.83
CSNK2A1-204ENST00000400227 RYR1P21817 5038 aa3.61□□□□□ -1.83
CSNK2A1-204ENST00000400227 SPATA8Q6RVD6 105 aa3.6□□□□□ -1.83
CSNK2A1-204ENST00000400227 TNXBP22105 4242 aa3.59□□□□□ -1.83
CSNK2A1-204ENST00000400227 C9orf92A6NGG3 77 aa3.59□□□□□ -1.84
CSNK2A1-204ENST00000400227 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
CSNK2A1-204ENST00000400227 HSPG2P98160 4391 aa3.58□□□□□ -1.84
CSNK2A1-204ENST00000400227 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
CSNK2A1-204ENST00000400227 UQCR11O14957 56 aa3.56□□□□□ -1.84
CSNK2A1-204ENST00000400227 MIR22HGQ0VDD5 57 aa3.56□□□□□ -1.84
CSNK2A1-204ENST00000400227 FLG2Q5D862 2391 aaPredicted RBP3.55□□□□□ -1.84
CSNK2A1-204ENST00000400227 KRTAP10-8P60410 259 aa3.53□□□□□ -1.84
CSNK2A1-204ENST00000400227 LRP1Q07954 4544 aaKnown RBP3.52□□□□□ -1.85
CSNK2A1-204ENST00000400227 RBM12B-AS1Q9P1G2 102 aa3.52□□□□□ -1.85
CSNK2A1-204ENST00000400227 COX6B2Q6YFQ2 88 aa3.49□□□□□ -1.85
CSNK2A1-204ENST00000400227 H0YAA0 97 aa3.47□□□□□ -1.85
CSNK2A1-204ENST00000400227 Q5VSD8 79 aa3.47□□□□□ -1.85
CSNK2A1-204ENST00000400227 HERC2O95714 4834 aa3.46□□□□□ -1.86
CSNK2A1-204ENST00000400227 RPL37P61927 97 aaKnown RBP3.46□□□□□ -1.86
CSNK2A1-204ENST00000400227 H1FX-AS1Q4G0G2 97 aa3.46□□□□□ -1.86
CSNK2A1-204ENST00000400227 ADM2Q7Z4H4 148 aa3.46□□□□□ -1.86
CSNK2A1-204ENST00000400227 A0A1B0GU33 70 aa3.45□□□□□ -1.86
CSNK2A1-204ENST00000400227 MYCBP2O75592 4640 aa3.43□□□□□ -1.86
CSNK2A1-204ENST00000400227 MT1HL1P0DM35 61 aa3.41□□□□□ -1.86
CSNK2A1-204ENST00000400227 KIAA1109Q2LD37 5005 aa3.38□□□□□ -1.87
CSNK2A1-204ENST00000400227 DMBT1Q9UGM3 2413 aaPredicted RBP3.38□□□□□ -1.87
CSNK2A1-204ENST00000400227 CSAG1Q6PB30 78 aa3.36□□□□□ -1.87
CSNK2A1-204ENST00000400227 S4R3F8 94 aa3.36□□□□□ -1.87
CSNK2A1-204ENST00000400227 LINC01554Q52M75 96 aa3.34□□□□□ -1.88
CSNK2A1-204ENST00000400227 KRTAP13-4Q3LI77 160 aa3.33□□□□□ -1.88
CSNK2A1-204ENST00000400227 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
CSNK2A1-204ENST00000400227 LRP2P98164 4655 aa3.32□□□□□ -1.88
CSNK2A1-204ENST00000400227 ABCA13Q86UQ4 5058 aa3.31□□□□□ -1.88
CSNK2A1-204ENST00000400227 K7ERS5 55 aa3.3□□□□□ -1.88
CSNK2A1-204ENST00000400227 TPRXLQ17RH7 258 aa3.3□□□□□ -1.88
CSNK2A1-204ENST00000400227 P0C880 135 aa3.29□□□□□ -1.88
CSNK2A1-204ENST00000400227 KRTAP25-1Q3LHN0 102 aa3.29□□□□□ -1.88
CSNK2A1-204ENST00000400227 LPAP08519 4548 aa3.28□□□□□ -1.89
CSNK2A1-204ENST00000400227 HERC1Q15751 4861 aa3.27□□□□□ -1.89
CSNK2A1-204ENST00000400227 MUC17Q685J3 4493 aa3.26□□□□□ -1.89
CSNK2A1-204ENST00000400227 A0A0D9SG42 100 aa3.26□□□□□ -1.89
CSNK2A1-204ENST00000400227 ROMO1P60602 79 aa3.26□□□□□ -1.89
CSNK2A1-204ENST00000400227 CRIPTQ9P021 101 aa3.22□□□□□ -1.89
CSNK2A1-204ENST00000400227 KRTAP12-1P59990 96 aa3.21□□□□□ -1.9
CSNK2A1-204ENST00000400227 M0QZ58 72 aa3.19□□□□□ -1.9
CSNK2A1-204ENST00000400227 KRTAP4-1Q9BYQ7 146 aa3.16□□□□□ -1.9
CSNK2A1-204ENST00000400227 SPINT4Q6UDR6 99 aa3.15□□□□□ -1.91
CSNK2A1-204ENST00000400227 KRTAP19-2Q3LHN2 52 aa3.14□□□□□ -1.91
CSNK2A1-204ENST00000400227 MUC2Q02817 5179 aa3.14□□□□□ -1.91
CSNK2A1-204ENST00000400227 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
CSNK2A1-204ENST00000400227 KRTAP5-8O75690 187 aa3.09□□□□□ -1.92
CSNK2A1-204ENST00000400227 FLGP20930 4061 aaPredicted RBP3.08□□□□□ -1.92
CSNK2A1-204ENST00000400227 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms