RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 A0A0A0MQY5 61 aa8.07□□□□□ -1.12
CYLD-202ENST00000398568 KRTAP15-1Q3LI76 137 aa8.07□□□□□ -1.12
CYLD-202ENST00000398568 KRTAP3-1Q9BYR8 98 aa8.06□□□□□ -1.12
CYLD-202ENST00000398568 A0A0D9SG42 100 aa8.05□□□□□ -1.12
CYLD-202ENST00000398568 C10orf95Q9H7T3 257 aa8.04□□□□□ -1.12
CYLD-202ENST00000398568 BIRC6Q9NR09 4857 aa8.02□□□□□ -1.13
CYLD-202ENST00000398568 KRTAP17-1Q9BYP8 105 aa8.02□□□□□ -1.13
CYLD-202ENST00000398568 RYR1P21817 5038 aa8□□□□□ -1.13
CYLD-202ENST00000398568 HSPG2P98160 4391 aa8□□□□□ -1.13
CYLD-202ENST00000398568 VPS13BQ7Z7G8 4022 aa7.95□□□□□ -1.14
CYLD-202ENST00000398568 KRTAP1-4P0C5Y4 121 aa7.95□□□□□ -1.14
CYLD-202ENST00000398568 C9orf92A6NGG3 77 aa7.95□□□□□ -1.14
CYLD-202ENST00000398568 KRTAP4-5Q9BYR2 181 aa7.95□□□□□ -1.14
CYLD-202ENST00000398568 Q5VSD8 79 aa7.93□□□□□ -1.14
CYLD-202ENST00000398568 DMBT1Q9UGM3 2413 aaPredicted RBP7.92□□□□□ -1.14
CYLD-202ENST00000398568 MYCBP2O75592 4640 aa7.9□□□□□ -1.14
CYLD-202ENST00000398568 ABCA13Q86UQ4 5058 aa7.87□□□□□ -1.15
CYLD-202ENST00000398568 KRTAP13-4Q3LI77 160 aa7.86□□□□□ -1.15
CYLD-202ENST00000398568 LRP1Q07954 4544 aaKnown RBP7.84□□□□□ -1.15
CYLD-202ENST00000398568 KRTAP10-6P60371 365 aaPredicted RBP7.83□□□□□ -1.16
CYLD-202ENST00000398568 HERC2O95714 4834 aa7.82□□□□□ -1.16
CYLD-202ENST00000398568 S4R3F8 94 aa7.82□□□□□ -1.16
CYLD-202ENST00000398568 RPS29P62273 56 aaKnown RBP7.81□□□□□ -1.16
CYLD-202ENST00000398568 PCLOQ9Y6V0 5065 aa7.8□□□□□ -1.16
CYLD-202ENST00000398568 LUZP6Q538Z0 58 aa7.79□□□□□ -1.16
CYLD-202ENST00000398568 KRTAP10-4P60372 401 aaPredicted RBP7.74□□□□□ -1.17
CYLD-202ENST00000398568 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
CYLD-202ENST00000398568 KRTAP12-2P59991 146 aa7.7□□□□□ -1.18
CYLD-202ENST00000398568 KRTAP3-3Q9BYR6 98 aa7.66□□□□□ -1.18
CYLD-202ENST00000398568 XP32Q5T750 250 aa7.63□□□□□ -1.19
CYLD-202ENST00000398568 HERC1Q15751 4861 aa7.61□□□□□ -1.19
CYLD-202ENST00000398568 J3QL48 77 aa7.61□□□□□ -1.19
CYLD-202ENST00000398568 KRTAP12-1P59990 96 aa7.6□□□□□ -1.19
CYLD-202ENST00000398568 PKHD1L1Q86WI1 4243 aa7.57□□□□□ -1.2
CYLD-202ENST00000398568 FAT3Q8TDW7 4589 aa7.57□□□□□ -1.2
CYLD-202ENST00000398568 PLAC4Q8WY50 150 aa7.52□□□□□ -1.21
CYLD-202ENST00000398568 MT1HL1P0DM35 61 aa7.48□□□□□ -1.21
CYLD-202ENST00000398568 TNXBP22105 4242 aa7.45□□□□□ -1.22
CYLD-202ENST00000398568 M0QZ58 72 aa7.44□□□□□ -1.22
CYLD-202ENST00000398568 KRTAP10-8P60410 259 aa7.43□□□□□ -1.22
CYLD-202ENST00000398568 LPAP08519 4548 aa7.32□□□□□ -1.24
CYLD-202ENST00000398568 LRP2P98164 4655 aa7.31□□□□□ -1.24
CYLD-202ENST00000398568 UBR4Q5T4S7 5183 aa7.22□□□□□ -1.25
CYLD-202ENST00000398568 HMCN2Q8NDA2 5059 aa7.21□□□□□ -1.26
CYLD-202ENST00000398568 SEC61BP60468 96 aaKnown RBP7.19□□□□□ -1.26
CYLD-202ENST00000398568 R4GN34 69 aa7.19□□□□□ -1.26
CYLD-202ENST00000398568 RNF213Q63HN8 5207 aa7.16□□□□□ -1.26
CYLD-202ENST00000398568 PP632Q6XCG6 107 aa7.13□□□□□ -1.27
CYLD-202ENST00000398568 MUC2Q02817 5179 aa7.13□□□□□ -1.27
CYLD-202ENST00000398568 CAMK2N1Q7Z7J9 78 aa6.96□□□□□ -1.3
CYLD-202ENST00000398568 LORP23490 312 aaPredicted RBP6.81□□□□□ -1.32
CYLD-202ENST00000398568 FAT4Q6V0I7 4981 aa6.81□□□□□ -1.32
CYLD-202ENST00000398568 KRTAP4-1Q9BYQ7 146 aa6.79□□□□□ -1.32
CYLD-202ENST00000398568 PRO2289Q9P1D8 64 aa6.79□□□□□ -1.32
CYLD-202ENST00000398568 SPRR5A0A1B0GTR4 108 aa6.73□□□□□ -1.33
CYLD-202ENST00000398568 TNP1P09430 55 aa6.72□□□□□ -1.33
CYLD-202ENST00000398568 KRTAP23-1A1A580 65 aa6.63□□□□□ -1.35
CYLD-202ENST00000398568 MUC17Q685J3 4493 aa6.62□□□□□ -1.35
CYLD-202ENST00000398568 INE1O15225 51 aa6.58□□□□□ -1.36
CYLD-202ENST00000398568 M0R2T5 61 aa6.47□□□□□ -1.37
CYLD-202ENST00000398568 KRTAP19-2Q3LHN2 52 aa6.42□□□□□ -1.38
CYLD-202ENST00000398568 LCE2CQ5TA81 110 aa6.41□□□□□ -1.38
CYLD-202ENST00000398568 MT1HP80294 61 aa6.34□□□□□ -1.39
CYLD-202ENST00000398568 FLGP20930 4061 aaPredicted RBP6.3□□□□□ -1.4
CYLD-202ENST00000398568 FSIP2Q5CZC0 6907 aa6.28□□□□□ -1.4
CYLD-202ENST00000398568 LCE2AQ5TA79 106 aaPredicted RBP6.24□□□□□ -1.41
CYLD-202ENST00000398568 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
CYLD-202ENST00000398568 KRTAP10-10P60014 251 aa6.07□□□□□ -1.44
CYLD-202ENST00000398568 USH2AO75445 5202 aa6.04□□□□□ -1.44
CYLD-202ENST00000398568 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
CYLD-202ENST00000398568 MT2AP02795 61 aa6.02□□□□□ -1.45
CYLD-202ENST00000398568 MT1FP04733 61 aa6.01□□□□□ -1.45
CYLD-202ENST00000398568 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
CYLD-202ENST00000398568 SPRR2GQ9BYE4 73 aa5.92□□□□□ -1.46
CYLD-202ENST00000398568 KRTAP12-3P60328 96 aa5.9□□□□□ -1.47
CYLD-202ENST00000398568 KRTAP9-2Q9BYQ4 174 aa5.88□□□□□ -1.47
CYLD-202ENST00000398568 KRTAP19-1Q8IUB9 90 aa5.84□□□□□ -1.47
CYLD-202ENST00000398568 KRTAP10-12P60413 245 aa5.82□□□□□ -1.48
CYLD-202ENST00000398568 KRTAP9-3Q9BYQ3 159 aa5.81□□□□□ -1.48
CYLD-202ENST00000398568 LCE2BO14633 110 aa5.79□□□□□ -1.48
CYLD-202ENST00000398568 SSPOA2VEC9 5147 aa5.75□□□□□ -1.49
CYLD-202ENST00000398568 LCE2DQ5TA82 110 aaPredicted RBP5.69□□□□□ -1.5
CYLD-202ENST00000398568 KRTAP10-5P60370 271 aa5.61□□□□□ -1.51
CYLD-202ENST00000398568 CRCT1Q9UGL9 99 aa5.6□□□□□ -1.51
CYLD-202ENST00000398568 MT1XP80297 61 aa5.57□□□□□ -1.52
CYLD-202ENST00000398568 MT1BP07438 61 aa5.56□□□□□ -1.52
CYLD-202ENST00000398568 LCE3CQ5T5A8 94 aa5.55□□□□□ -1.52
CYLD-202ENST00000398568 FCGBPQ9Y6R7 5405 aaPredicted RBP5.54□□□□□ -1.52
CYLD-202ENST00000398568 KRTAP19-8Q3LI54 63 aa5.53□□□□□ -1.52
CYLD-202ENST00000398568 KRTAP9-6A0A140TA67 174 aa5.52□□□□□ -1.53
CYLD-202ENST00000398568 KRTAP10-7P60409 375 aaPredicted RBP5.5□□□□□ -1.53
CYLD-202ENST00000398568 KMT2DO14686 5537 aa5.41□□□□□ -1.54
CYLD-202ENST00000398568 KRTAP19-5Q3LI72 72 aa5.41□□□□□ -1.54
CYLD-202ENST00000398568 MACF1Q9UPN3 7388 aaKnown RBP5.41□□□□□ -1.54
CYLD-202ENST00000398568 SYNE2Q8WXH0 6885 aaKnown RBP5.4□□□□□ -1.55
CYLD-202ENST00000398568 KRTAP2-3P0C7H8 128 aa5.38□□□□□ -1.55
CYLD-202ENST00000398568 KRTAP2-4Q9BYR9 128 aa5.38□□□□□ -1.55
CYLD-202ENST00000398568 KRTAP2-1Q9BYU5 128 aa5.38□□□□□ -1.55
CYLD-202ENST00000398568 KRTAP19-6Q3LI70 58 aa5.35□□□□□ -1.55
CYLD-202ENST00000398568 KRTAP9-6A8MVA2 160 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms