RNA–Protein interactions for RNA: ENST00000398486.2

KRT40-202, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-202ENST00000398486 FAT4Q6V0I7 4981 aa6.61□□□□□ -1.35
KRT40-202ENST00000398486 KRTAP19-2Q3LHN2 52 aa6.6□□□□□ -1.35
KRT40-202ENST00000398486 PSPHP1O15172 72 aa6.59□□□□□ -1.35
KRT40-202ENST00000398486 BRK1Q8WUW1 75 aa6.58□□□□□ -1.36
KRT40-202ENST00000398486 PRR15LQ9BU68 103 aa6.58□□□□□ -1.36
KRT40-202ENST00000398486 LINC01558Q9Y6Z2 57 aa6.57□□□□□ -1.36
KRT40-202ENST00000398486 KRTAP3-1Q9BYR8 98 aa6.54□□□□□ -1.36
KRT40-202ENST00000398486 Q5VV11 94 aa6.52□□□□□ -1.37
KRT40-202ENST00000398486 LCE2CQ5TA81 110 aa6.51□□□□□ -1.37
KRT40-202ENST00000398486 COX6B2Q6YFQ2 88 aa6.51□□□□□ -1.37
KRT40-202ENST00000398486 SPTSSBQ8NFR3 76 aa6.5□□□□□ -1.37
KRT40-202ENST00000398486 RBM12B-AS1Q9P1G2 102 aa6.49□□□□□ -1.37
KRT40-202ENST00000398486 A0A1B0GU69 56 aa6.44□□□□□ -1.38
KRT40-202ENST00000398486 A6NED7 52 aa6.42□□□□□ -1.38
KRT40-202ENST00000398486 H1FX-AS1Q4G0G2 97 aa6.41□□□□□ -1.38
KRT40-202ENST00000398486 LCE2DQ5TA82 110 aaPredicted RBP6.38□□□□□ -1.39
KRT40-202ENST00000398486 SEC61GP60059 68 aa6.37□□□□□ -1.39
KRT40-202ENST00000398486 MT1HP80294 61 aa6.36□□□□□ -1.39
KRT40-202ENST00000398486 LCA10Q71F78 164 aa6.33□□□□□ -1.4
KRT40-202ENST00000398486 S4R3F8 94 aa6.32□□□□□ -1.4
KRT40-202ENST00000398486 KRTAP3-3Q9BYR6 98 aa6.31□□□□□ -1.4
KRT40-202ENST00000398486 CDC42SE1Q9NRR8 79 aa6.31□□□□□ -1.4
KRT40-202ENST00000398486 LCE2AQ5TA79 106 aaPredicted RBP6.29□□□□□ -1.4
KRT40-202ENST00000398486 UQCR11O14957 56 aa6.28□□□□□ -1.4
KRT40-202ENST00000398486 A8MU10 97 aa6.26□□□□□ -1.41
KRT40-202ENST00000398486 PMAIP1Q13794 54 aa6.23□□□□□ -1.41
KRT40-202ENST00000398486 MIR22HGQ0VDD5 57 aa6.21□□□□□ -1.41
KRT40-202ENST00000398486 M0R2T5 61 aa6.2□□□□□ -1.42
KRT40-202ENST00000398486 SPATA8Q6RVD6 105 aa6.19□□□□□ -1.42
KRT40-202ENST00000398486 CSAG1Q6PB30 78 aa6.17□□□□□ -1.42
KRT40-202ENST00000398486 A0A1B0GU33 70 aa6.16□□□□□ -1.42
KRT40-202ENST00000398486 KRTAP10-6P60371 365 aaPredicted RBP6.16□□□□□ -1.42
KRT40-202ENST00000398486 A6NN06 94 aa6.14□□□□□ -1.43
KRT40-202ENST00000398486 LORP23490 312 aaPredicted RBP6.14□□□□□ -1.43
KRT40-202ENST00000398486 KTN1-AS1Q86SY8 53 aa6.12□□□□□ -1.43
KRT40-202ENST00000398486 KRTAP9-8Q9BYQ0 159 aa6.11□□□□□ -1.43
KRT40-202ENST00000398486 KRTAP3-2Q9BYR7 98 aa6.09□□□□□ -1.43
KRT40-202ENST00000398486 H0YAA0 97 aa6.08□□□□□ -1.44
KRT40-202ENST00000398486 MT2AP02795 61 aa6.07□□□□□ -1.44
KRT40-202ENST00000398486 MT1FP04733 61 aa6.04□□□□□ -1.44
KRT40-202ENST00000398486 ADM2Q7Z4H4 148 aa6.04□□□□□ -1.44
KRT40-202ENST00000398486 P0C880 135 aa6.01□□□□□ -1.45
KRT40-202ENST00000398486 KRTAP10-10P60014 251 aa5.95□□□□□ -1.46
KRT40-202ENST00000398486 K7ERS5 55 aa5.95□□□□□ -1.46
KRT40-202ENST00000398486 KRTAP13-4Q3LI77 160 aa5.93□□□□□ -1.46
KRT40-202ENST00000398486 M0QZ58 72 aa5.9□□□□□ -1.46
KRT40-202ENST00000398486 A0A0D9SG42 100 aa5.89□□□□□ -1.47
KRT40-202ENST00000398486 KRTAP9-3Q9BYQ3 159 aa5.89□□□□□ -1.47
KRT40-202ENST00000398486 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
KRT40-202ENST00000398486 R4GN34 69 aa5.83□□□□□ -1.48
KRT40-202ENST00000398486 SPRR2GQ9BYE4 73 aa5.83□□□□□ -1.48
KRT40-202ENST00000398486 CRIPTQ9P021 101 aa5.82□□□□□ -1.48
KRT40-202ENST00000398486 USH2AO75445 5202 aa5.81□□□□□ -1.48
KRT40-202ENST00000398486 PRAC1Q96KF2 57 aa5.8□□□□□ -1.48
KRT40-202ENST00000398486 LCE2BO14633 110 aa5.78□□□□□ -1.48
KRT40-202ENST00000398486 SPINT4Q6UDR6 99 aa5.75□□□□□ -1.49
KRT40-202ENST00000398486 KRTAP12-1P59990 96 aa5.73□□□□□ -1.49
KRT40-202ENST00000398486 KRTAP12-2P59991 146 aa5.73□□□□□ -1.49
KRT40-202ENST00000398486 LINC01554Q52M75 96 aa5.73□□□□□ -1.49
KRT40-202ENST00000398486 KRTAP19-8Q3LI54 63 aa5.7□□□□□ -1.5
KRT40-202ENST00000398486 FSIP2Q5CZC0 6907 aa5.7□□□□□ -1.5
KRT40-202ENST00000398486 ROMO1P60602 79 aa5.69□□□□□ -1.5
KRT40-202ENST00000398486 MT1BP07438 61 aa5.67□□□□□ -1.5
KRT40-202ENST00000398486 SSPOA2VEC9 5147 aa5.65□□□□□ -1.5
KRT40-202ENST00000398486 KRTAP9-2Q9BYQ4 174 aa5.65□□□□□ -1.51
KRT40-202ENST00000398486 KRTAP25-1Q3LHN0 102 aa5.55□□□□□ -1.52
KRT40-202ENST00000398486 CAMK2N1Q7Z7J9 78 aa5.5□□□□□ -1.53
KRT40-202ENST00000398486 PLAC4Q8WY50 150 aa5.5□□□□□ -1.53
KRT40-202ENST00000398486 MT1XP80297 61 aa5.44□□□□□ -1.54
KRT40-202ENST00000398486 KRTAP19-6Q3LI70 58 aa5.44□□□□□ -1.54
KRT40-202ENST00000398486 FCGBPQ9Y6R7 5405 aaPredicted RBP5.44□□□□□ -1.54
KRT40-202ENST00000398486 KRTAP10-5P60370 271 aa5.42□□□□□ -1.54
KRT40-202ENST00000398486 C10orf95Q9H7T3 257 aa5.39□□□□□ -1.55
KRT40-202ENST00000398486 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
KRT40-202ENST00000398486 PRO2289Q9P1D8 64 aa5.3□□□□□ -1.56
KRT40-202ENST00000398486 KRTAP9-6A0A140TA67 174 aa5.27□□□□□ -1.57
KRT40-202ENST00000398486 TNP1P09430 55 aa5.25□□□□□ -1.57
KRT40-202ENST00000398486 KMT2DO14686 5537 aa5.23□□□□□ -1.57
KRT40-202ENST00000398486 KRTAP10-7P60409 375 aaPredicted RBP5.21□□□□□ -1.57
KRT40-202ENST00000398486 PP632Q6XCG6 107 aa5.21□□□□□ -1.57
KRT40-202ENST00000398486 MACF1Q9UPN3 7388 aaKnown RBP5.19□□□□□ -1.58
KRT40-202ENST00000398486 H3BS24 57 aa5.17□□□□□ -1.58
KRT40-202ENST00000398486 KRTAP10-12P60413 245 aa5.14□□□□□ -1.59
KRT40-202ENST00000398486 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
KRT40-202ENST00000398486 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
KRT40-202ENST00000398486 KRTAP4-8A0A0G2JLE6 195 aa5.06□□□□□ -1.6
KRT40-202ENST00000398486 KRTAP4-8Q9BYQ9 185 aa5.06□□□□□ -1.6
KRT40-202ENST00000398486 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
KRT40-202ENST00000398486 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.03□□□□□ -1.6
KRT40-202ENST00000398486 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
KRT40-202ENST00000398486 KRTAP8-1Q8IUC2 63 aa4.92□□□□□ -1.62
KRT40-202ENST00000398486 MUC12Q9UKN1 5478 aa4.9□□□□□ -1.62
KRT40-202ENST00000398486 KRTAP19-7Q3SYF9 63 aa4.86□□□□□ -1.63
KRT40-202ENST00000398486 NDUFAF8A1L188 74 aa4.86□□□□□ -1.63
KRT40-202ENST00000398486 MDN1Q9NU22 5596 aa4.85□□□□□ -1.63
KRT40-202ENST00000398486 KRTAP5-9P26371 169 aa4.85□□□□□ -1.63
KRT40-202ENST00000398486 KRTAP19-5Q3LI72 72 aa4.85□□□□□ -1.63
KRT40-202ENST00000398486 KRTAP6-3Q3LI67 103 aa4.82□□□□□ -1.64
KRT40-202ENST00000398486 SPRR2FQ96RM1 72 aa4.81□□□□□ -1.64
KRT40-202ENST00000398486 KRTAP9-7A8MTY7 169 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms