RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 HERC2O95714 4834 aa3.78□□□□□ -1.8
RGPD1-201ENST00000398193 S4R3F8 94 aa3.77□□□□□ -1.81
RGPD1-201ENST00000398193 SPATA8Q6RVD6 105 aa3.76□□□□□ -1.81
RGPD1-201ENST00000398193 UQCR11O14957 56 aa3.76□□□□□ -1.81
RGPD1-201ENST00000398193 KIAA1109Q2LD37 5005 aa3.73□□□□□ -1.81
RGPD1-201ENST00000398193 LCA10Q71F78 164 aa3.73□□□□□ -1.81
RGPD1-201ENST00000398193 A8MU10 97 aa3.72□□□□□ -1.81
RGPD1-201ENST00000398193 MIR22HGQ0VDD5 57 aa3.71□□□□□ -1.82
RGPD1-201ENST00000398193 KRTAP3-3Q9BYR6 98 aa3.71□□□□□ -1.82
RGPD1-201ENST00000398193 H0YAA0 97 aa3.7□□□□□ -1.82
RGPD1-201ENST00000398193 A0A1B0GU33 70 aa3.67□□□□□ -1.82
RGPD1-201ENST00000398193 CSAG1Q6PB30 78 aa3.66□□□□□ -1.82
RGPD1-201ENST00000398193 ABCA13Q86UQ4 5058 aa3.65□□□□□ -1.82
RGPD1-201ENST00000398193 A6NN06 94 aa3.64□□□□□ -1.83
RGPD1-201ENST00000398193 KRTAP3-2Q9BYR7 98 aa3.62□□□□□ -1.83
RGPD1-201ENST00000398193 KRTAP10-6P60371 365 aaPredicted RBP3.61□□□□□ -1.83
RGPD1-201ENST00000398193 PMAIP1Q13794 54 aa3.61□□□□□ -1.83
RGPD1-201ENST00000398193 M0QZ58 72 aa3.59□□□□□ -1.83
RGPD1-201ENST00000398193 KRTAP19-2Q3LHN2 52 aa3.58□□□□□ -1.84
RGPD1-201ENST00000398193 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
RGPD1-201ENST00000398193 KRTAP4-1Q9BYQ7 146 aa3.58□□□□□ -1.84
RGPD1-201ENST00000398193 K7ERS5 55 aa3.57□□□□□ -1.84
RGPD1-201ENST00000398193 ADM2Q7Z4H4 148 aa3.57□□□□□ -1.84
RGPD1-201ENST00000398193 HERC1Q15751 4861 aa3.55□□□□□ -1.84
RGPD1-201ENST00000398193 LPAP08519 4548 aa3.54□□□□□ -1.84
RGPD1-201ENST00000398193 CRIPTQ9P021 101 aa3.53□□□□□ -1.84
RGPD1-201ENST00000398193 PCLOQ9Y6V0 5065 aa3.51□□□□□ -1.85
RGPD1-201ENST00000398193 P0C880 135 aa3.5□□□□□ -1.85
RGPD1-201ENST00000398193 LRP2P98164 4655 aa3.5□□□□□ -1.85
RGPD1-201ENST00000398193 DMBT1Q9UGM3 2413 aaPredicted RBP3.48□□□□□ -1.85
RGPD1-201ENST00000398193 KRTAP13-4Q3LI77 160 aa3.48□□□□□ -1.85
RGPD1-201ENST00000398193 HMCN2Q8NDA2 5059 aa3.47□□□□□ -1.85
RGPD1-201ENST00000398193 FLGP20930 4061 aaPredicted RBP3.45□□□□□ -1.86
RGPD1-201ENST00000398193 ROMO1P60602 79 aa3.43□□□□□ -1.86
RGPD1-201ENST00000398193 LCE2CQ5TA81 110 aa3.43□□□□□ -1.86
RGPD1-201ENST00000398193 R4GN34 69 aa3.42□□□□□ -1.86
RGPD1-201ENST00000398193 KRTAP12-1P59990 96 aa3.41□□□□□ -1.86
RGPD1-201ENST00000398193 A0A0D9SG42 100 aa3.39□□□□□ -1.87
RGPD1-201ENST00000398193 KRTAP12-2P59991 146 aa3.38□□□□□ -1.87
RGPD1-201ENST00000398193 MT1HP80294 61 aa3.37□□□□□ -1.87
RGPD1-201ENST00000398193 KRTAP25-1Q3LHN0 102 aa3.33□□□□□ -1.88
RGPD1-201ENST00000398193 SPINT4Q6UDR6 99 aa3.33□□□□□ -1.88
RGPD1-201ENST00000398193 SPRR2GQ9BYE4 73 aa3.32□□□□□ -1.88
RGPD1-201ENST00000398193 LORP23490 312 aaPredicted RBP3.31□□□□□ -1.88
RGPD1-201ENST00000398193 PRAC1Q96KF2 57 aa3.3□□□□□ -1.88
RGPD1-201ENST00000398193 M0R2T5 61 aa3.29□□□□□ -1.88
RGPD1-201ENST00000398193 LINC01554Q52M75 96 aa3.26□□□□□ -1.89
RGPD1-201ENST00000398193 MT2AP02795 61 aa3.25□□□□□ -1.89
RGPD1-201ENST00000398193 KRTAP9-8Q9BYQ0 159 aa3.25□□□□□ -1.89
RGPD1-201ENST00000398193 KRTAP23-1A1A580 65 aa3.24□□□□□ -1.89
RGPD1-201ENST00000398193 PLAC4Q8WY50 150 aa3.23□□□□□ -1.89
RGPD1-201ENST00000398193 KRTAP19-8Q3LI54 63 aa3.23□□□□□ -1.89
RGPD1-201ENST00000398193 RNF213Q63HN8 5207 aa3.22□□□□□ -1.89
RGPD1-201ENST00000398193 PP632Q6XCG6 107 aa3.21□□□□□ -1.9
RGPD1-201ENST00000398193 MT1FP04733 61 aa3.21□□□□□ -1.9
RGPD1-201ENST00000398193 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
RGPD1-201ENST00000398193 KRTAP19-1Q8IUB9 90 aa3.21□□□□□ -1.9
RGPD1-201ENST00000398193 C10orf95Q9H7T3 257 aa3.21□□□□□ -1.9
RGPD1-201ENST00000398193 KRTAP10-10P60014 251 aa3.2□□□□□ -1.9
RGPD1-201ENST00000398193 LCE2AQ5TA79 106 aaPredicted RBP3.15□□□□□ -1.91
RGPD1-201ENST00000398193 KRTAP9-3Q9BYQ3 159 aa3.15□□□□□ -1.91
RGPD1-201ENST00000398193 TNP1P09430 55 aa3.14□□□□□ -1.91
RGPD1-201ENST00000398193 FAT4Q6V0I7 4981 aa3.14□□□□□ -1.91
RGPD1-201ENST00000398193 MT1BP07438 61 aa3.1□□□□□ -1.91
RGPD1-201ENST00000398193 PRO2289Q9P1D8 64 aa3.07□□□□□ -1.92
RGPD1-201ENST00000398193 UBR4Q5T4S7 5183 aa3.07□□□□□ -1.92
RGPD1-201ENST00000398193 MUC2Q02817 5179 aa3.06□□□□□ -1.92
RGPD1-201ENST00000398193 KRTAP10-5P60370 271 aa3.03□□□□□ -1.92
RGPD1-201ENST00000398193 MT1XP80297 61 aa3.03□□□□□ -1.92
RGPD1-201ENST00000398193 H3BS24 57 aa3□□□□□ -1.93
RGPD1-201ENST00000398193 KRTAP15-1Q3LI76 137 aa2.98□□□□□ -1.93
RGPD1-201ENST00000398193 LCE2BO14633 110 aa2.97□□□□□ -1.93
RGPD1-201ENST00000398193 KRTAP10-12P60413 245 aa2.94□□□□□ -1.94
RGPD1-201ENST00000398193 KRTAP8-1Q8IUC2 63 aa2.93□□□□□ -1.94
RGPD1-201ENST00000398193 LCE2DQ5TA82 110 aaPredicted RBP2.93□□□□□ -1.94
RGPD1-201ENST00000398193 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
RGPD1-201ENST00000398193 KRTAP19-4Q3LI73 84 aa2.88□□□□□ -1.95
RGPD1-201ENST00000398193 KRTAP19-6Q3LI70 58 aa2.88□□□□□ -1.95
RGPD1-201ENST00000398193 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
RGPD1-201ENST00000398193 KRTAP10-7P60409 375 aaPredicted RBP2.86□□□□□ -1.95
RGPD1-201ENST00000398193 KRTAP12-3P60328 96 aa2.83□□□□□ -1.96
RGPD1-201ENST00000398193 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
RGPD1-201ENST00000398193 KRTAP19-5Q3LI72 72 aa2.75□□□□□ -1.97
RGPD1-201ENST00000398193 USH2AO75445 5202 aa2.72□□□□□ -1.97
RGPD1-201ENST00000398193 SSPOA2VEC9 5147 aa2.72□□□□□ -1.97
RGPD1-201ENST00000398193 NDUFAF8A1L188 74 aa2.69□□□□□ -1.98
RGPD1-201ENST00000398193 KRTAP19-7Q3SYF9 63 aa2.68□□□□□ -1.98
RGPD1-201ENST00000398193 LCE3CQ5T5A8 94 aa2.68□□□□□ -1.98
RGPD1-201ENST00000398193 MT1EP04732 61 aa2.66□□□□□ -1.98
RGPD1-201ENST00000398193 KRTAP4-8A0A0G2JLE6 195 aa2.65□□□□□ -1.99
RGPD1-201ENST00000398193 KRTAP4-8Q9BYQ9 185 aa2.65□□□□□ -1.99
RGPD1-201ENST00000398193 A0A0A0MQY5 61 aa2.62□□□□□ -1.99
RGPD1-201ENST00000398193 MT1LQ93083 61 aa2.62□□□□□ -1.99
RGPD1-201ENST00000398193 KRTAP9-2Q9BYQ4 174 aa2.59□□□□□ -2
RGPD1-201ENST00000398193 MT1GP13640 62 aa2.55□□□□□ -2
RGPD1-201ENST00000398193 KRTAP19-3Q7Z4W3 81 aa2.55□□□□□ -2
RGPD1-201ENST00000398193 CRCT1Q9UGL9 99 aa2.55□□□□□ -2
RGPD1-201ENST00000398193 KRTAP5-9P26371 169 aa2.51□□□□□ -2.01
RGPD1-201ENST00000398193 MT1MQ8N339 61 aa2.49□□□□□ -2.01
RGPD1-201ENST00000398193 LCE5AQ5TCM9 118 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms