RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 ATP5EP56381 51 aaPredicted RBP12.24□□□□□ -0.45
TMEM55B-202ENST00000398020 MT2AP02795 61 aa12.17□□□□□ -0.46
TMEM55B-202ENST00000398020 LCE2DQ5TA82 110 aaPredicted RBP12.17□□□□□ -0.46
TMEM55B-202ENST00000398020 SPANXA2-OT1Q8N9U9 137 aa12.15□□□□□ -0.46
TMEM55B-202ENST00000398020 S4R3F8 94 aa12.13□□□□□ -0.47
TMEM55B-202ENST00000398020 RPS28P62857 69 aaKnown RBP12.13□□□□□ -0.47
TMEM55B-202ENST00000398020 MT1FP04733 61 aa12.1□□□□□ -0.47
TMEM55B-202ENST00000398020 SERP1Q9Y6X1 66 aa12.09□□□□□ -0.47
TMEM55B-202ENST00000398020 LCA10Q71F78 164 aa12.08□□□□□ -0.48
TMEM55B-202ENST00000398020 KRTAP10-10P60014 251 aa12.04□□□□□ -0.48
TMEM55B-202ENST00000398020 FSIP2Q5CZC0 6907 aa11.96□□□□□ -0.49
TMEM55B-202ENST00000398020 CSAG1Q6PB30 78 aa11.96□□□□□ -0.5
TMEM55B-202ENST00000398020 KRTAP3-3Q9BYR6 98 aa11.95□□□□□ -0.5
TMEM55B-202ENST00000398020 A8MUN3 132 aa11.94□□□□□ -0.5
TMEM55B-202ENST00000398020 KRTAP9-3Q9BYQ3 159 aa11.87□□□□□ -0.51
TMEM55B-202ENST00000398020 SVIPQ8NHG7 77 aa11.84□□□□□ -0.51
TMEM55B-202ENST00000398020 DMAC1Q96GE9 116 aa11.82□□□□□ -0.52
TMEM55B-202ENST00000398020 SMIM26A0A096LP01 95 aa11.78□□□□□ -0.52
TMEM55B-202ENST00000398020 COA5Q86WW8 74 aa11.78□□□□□ -0.52
TMEM55B-202ENST00000398020 USH2AO75445 5202 aa11.74□□□□□ -0.53
TMEM55B-202ENST00000398020 ACYP2P14621 99 aa11.74□□□□□ -0.53
TMEM55B-202ENST00000398020 LCE2BO14633 110 aa11.73□□□□□ -0.53
TMEM55B-202ENST00000398020 KRTAP9-6A0A140TA67 174 aa11.68□□□□□ -0.54
TMEM55B-202ENST00000398020 CRCT1Q9UGL9 99 aa11.68□□□□□ -0.54
TMEM55B-202ENST00000398020 Q1T7F1 81 aa11.54□□□□□ -0.56
TMEM55B-202ENST00000398020 SSPOA2VEC9 5147 aa11.53□□□□□ -0.56
TMEM55B-202ENST00000398020 CHKB-CPT1BH3BT56 60 aa11.53□□□□□ -0.56
TMEM55B-202ENST00000398020 H0YAA0 97 aa11.52□□□□□ -0.56
TMEM55B-202ENST00000398020 KRTAP19-1Q8IUB9 90 aa11.51□□□□□ -0.57
TMEM55B-202ENST00000398020 ADM2Q7Z4H4 148 aa11.49□□□□□ -0.57
TMEM55B-202ENST00000398020 V9GYY9 64 aa11.46□□□□□ -0.58
TMEM55B-202ENST00000398020 SPRR2GQ9BYE4 73 aa11.4□□□□□ -0.58
TMEM55B-202ENST00000398020 LINC01558Q9Y6Z2 57 aa11.37□□□□□ -0.59
TMEM55B-202ENST00000398020 SPTSSBQ8NFR3 76 aa11.36□□□□□ -0.59
TMEM55B-202ENST00000398020 CRIPTQ9P021 101 aa11.36□□□□□ -0.59
TMEM55B-202ENST00000398020 P0C880 135 aa11.32□□□□□ -0.6
TMEM55B-202ENST00000398020 PSPHP1O15172 72 aa11.3□□□□□ -0.6
TMEM55B-202ENST00000398020 KRTAP3-2Q9BYR7 98 aa11.28□□□□□ -0.6
TMEM55B-202ENST00000398020 PRR15LQ9BU68 103 aa11.27□□□□□ -0.61
TMEM55B-202ENST00000398020 KRTAP19-8Q3LI54 63 aa11.24□□□□□ -0.61
TMEM55B-202ENST00000398020 Q5VV11 94 aa11.22□□□□□ -0.61
TMEM55B-202ENST00000398020 MT1BP07438 61 aa11.21□□□□□ -0.61
TMEM55B-202ENST00000398020 FCGBPQ9Y6R7 5405 aaPredicted RBP11.19□□□□□ -0.62
TMEM55B-202ENST00000398020 KRTAP19-6Q3LI70 58 aa11.18□□□□□ -0.62
TMEM55B-202ENST00000398020 R4GN34 69 aa11.15□□□□□ -0.62
TMEM55B-202ENST00000398020 A0A1B0GU69 56 aa11.12□□□□□ -0.63
TMEM55B-202ENST00000398020 M0QZ58 72 aa11.1□□□□□ -0.63
TMEM55B-202ENST00000398020 SEC61GP60059 68 aa11□□□□□ -0.65
TMEM55B-202ENST00000398020 LINC01554Q52M75 96 aa10.95□□□□□ -0.66
TMEM55B-202ENST00000398020 A6NED7 52 aa10.94□□□□□ -0.66
TMEM55B-202ENST00000398020 BRK1Q8WUW1 75 aa10.92□□□□□ -0.66
TMEM55B-202ENST00000398020 A6NN06 94 aa10.89□□□□□ -0.67
TMEM55B-202ENST00000398020 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.86□□□□□ -0.67
TMEM55B-202ENST00000398020 PLAC4Q8WY50 150 aa10.83□□□□□ -0.68
TMEM55B-202ENST00000398020 KRTAP10-5P60370 271 aa10.82□□□□□ -0.68
TMEM55B-202ENST00000398020 UQCR11O14957 56 aa10.81□□□□□ -0.68
TMEM55B-202ENST00000398020 MACF1Q9UPN3 7388 aaKnown RBP10.79□□□□□ -0.68
TMEM55B-202ENST00000398020 KRTAP13-4Q3LI77 160 aa10.79□□□□□ -0.68
TMEM55B-202ENST00000398020 CDC42SE1Q9NRR8 79 aa10.79□□□□□ -0.68
TMEM55B-202ENST00000398020 PRO0628Q9UI54 55 aa10.77□□□□□ -0.69
TMEM55B-202ENST00000398020 A8MU10 97 aa10.76□□□□□ -0.69
TMEM55B-202ENST00000398020 A0A1B0GU33 70 aa10.76□□□□□ -0.69
TMEM55B-202ENST00000398020 SPATA8Q6RVD6 105 aa10.73□□□□□ -0.69
TMEM55B-202ENST00000398020 MIR22HGQ0VDD5 57 aa10.7□□□□□ -0.7
TMEM55B-202ENST00000398020 MT1XP80297 61 aa10.64□□□□□ -0.71
TMEM55B-202ENST00000398020 SYNE2Q8WXH0 6885 aaKnown RBP10.63□□□□□ -0.71
TMEM55B-202ENST00000398020 PRO2289Q9P1D8 64 aa10.6□□□□□ -0.71
TMEM55B-202ENST00000398020 KRTAP9-7A8MTY7 169 aa10.57□□□□□ -0.72
TMEM55B-202ENST00000398020 A0A0D9SG42 100 aa10.53□□□□□ -0.72
TMEM55B-202ENST00000398020 PMAIP1Q13794 54 aa10.34□□□□□ -0.75
TMEM55B-202ENST00000398020 CAMK2N1Q7Z7J9 78 aa10.34□□□□□ -0.75
TMEM55B-202ENST00000398020 SPINT4Q6UDR6 99 aa10.33□□□□□ -0.76
TMEM55B-202ENST00000398020 KRTAP12-1P59990 96 aa10.28□□□□□ -0.76
TMEM55B-202ENST00000398020 KRTAP6-3Q3LI67 103 aa10.28□□□□□ -0.76
TMEM55B-202ENST00000398020 KMT2DO14686 5537 aa10.27□□□□□ -0.77
TMEM55B-202ENST00000398020 KRTAP12-2P59991 146 aa10.24□□□□□ -0.77
TMEM55B-202ENST00000398020 KRTAP10-7P60409 375 aaPredicted RBP10.2□□□□□ -0.78
TMEM55B-202ENST00000398020 K7ERS5 55 aa10.17□□□□□ -0.78
TMEM55B-202ENST00000398020 KRTAP10-12P60413 245 aa10.09□□□□□ -0.79
TMEM55B-202ENST00000398020 KRTAP4-8A0A0G2JLE6 195 aa10.06□□□□□ -0.8
TMEM55B-202ENST00000398020 KRTAP4-8Q9BYQ9 185 aa10.06□□□□□ -0.8
TMEM55B-202ENST00000398020 KRTAP5-9P26371 169 aa10.02□□□□□ -0.8
TMEM55B-202ENST00000398020 KRTAP8-1Q8IUC2 63 aa10.02□□□□□ -0.81
TMEM55B-202ENST00000398020 MUC12Q9UKN1 5478 aa10.01□□□□□ -0.81
TMEM55B-202ENST00000398020 KTN1-AS1Q86SY8 53 aa9.95□□□□□ -0.82
TMEM55B-202ENST00000398020 SPRR2FQ96RM1 72 aa9.9□□□□□ -0.82
TMEM55B-202ENST00000398020 MDN1Q9NU22 5596 aa9.85□□□□□ -0.83
TMEM55B-202ENST00000398020 NEBP20929 6669 aa9.83□□□□□ -0.84
TMEM55B-202ENST00000398020 ROMO1P60602 79 aa9.8□□□□□ -0.84
TMEM55B-202ENST00000398020 C10orf95Q9H7T3 257 aa9.8□□□□□ -0.84
TMEM55B-202ENST00000398020 PRAC1Q96KF2 57 aa9.68□□□□□ -0.86
TMEM55B-202ENST00000398020 TNP1P09430 55 aa9.63□□□□□ -0.87
TMEM55B-202ENST00000398020 SPRR2EP22531 72 aa9.63□□□□□ -0.87
TMEM55B-202ENST00000398020 SPRR2BP35325 72 aa9.63□□□□□ -0.87
TMEM55B-202ENST00000398020 SPRR2AP35326 72 aa9.63□□□□□ -0.87
TMEM55B-202ENST00000398020 LCE1AQ5T7P2 110 aa9.56□□□□□ -0.88
TMEM55B-202ENST00000398020 KRTAP19-7Q3SYF9 63 aa9.51□□□□□ -0.89
TMEM55B-202ENST00000398020 LCE3AQ5TA76 89 aa9.46□□□□□ -0.89
TMEM55B-202ENST00000398020 KRTAP25-1Q3LHN0 102 aa9.44□□□□□ -0.9
TMEM55B-202ENST00000398020 KRTAP19-5Q3LI72 72 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms