RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 LCE2CQ5TA81 110 aa9.59□□□□□ -0.87
PDLIM2-205ENST00000397761 S4R3F8 94 aa9.59□□□□□ -0.87
PDLIM2-205ENST00000397761 LCA10Q71F78 164 aa9.58□□□□□ -0.88
PDLIM2-205ENST00000397761 FLGP20930 4061 aaPredicted RBP9.58□□□□□ -0.88
PDLIM2-205ENST00000397761 KRTAP3-3Q9BYR6 98 aa9.57□□□□□ -0.88
PDLIM2-205ENST00000397761 LCE2AQ5TA79 106 aaPredicted RBP9.53□□□□□ -0.88
PDLIM2-205ENST00000397761 SPTSSBQ8NFR3 76 aa9.49□□□□□ -0.89
PDLIM2-205ENST00000397761 SMIM26A0A096LP01 95 aa9.47□□□□□ -0.89
PDLIM2-205ENST00000397761 CSAG1Q6PB30 78 aa9.4□□□□□ -0.9
PDLIM2-205ENST00000397761 MT1HP80294 61 aa9.38□□□□□ -0.91
PDLIM2-205ENST00000397761 Q1T7F1 81 aa9.36□□□□□ -0.91
PDLIM2-205ENST00000397761 LINC01558Q9Y6Z2 57 aa9.34□□□□□ -0.91
PDLIM2-205ENST00000397761 V9GYY9 64 aa9.32□□□□□ -0.92
PDLIM2-205ENST00000397761 H0YAA0 97 aa9.25□□□□□ -0.93
PDLIM2-205ENST00000397761 KRTAP9-2Q9BYQ4 174 aa9.22□□□□□ -0.93
PDLIM2-205ENST00000397761 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
PDLIM2-205ENST00000397761 A0A1B0GU69 56 aa9.19□□□□□ -0.94
PDLIM2-205ENST00000397761 M0R2T5 61 aa9.19□□□□□ -0.94
PDLIM2-205ENST00000397761 SEC61GP60059 68 aa9.16□□□□□ -0.94
PDLIM2-205ENST00000397761 PRR15LQ9BU68 103 aa9.16□□□□□ -0.94
PDLIM2-205ENST00000397761 KRTAP10-6P60371 365 aaPredicted RBP9.15□□□□□ -0.94
PDLIM2-205ENST00000397761 PSPHP1O15172 72 aa9.13□□□□□ -0.95
PDLIM2-205ENST00000397761 ADM2Q7Z4H4 148 aa9.13□□□□□ -0.95
PDLIM2-205ENST00000397761 Q5VV11 94 aa9.1□□□□□ -0.95
PDLIM2-205ENST00000397761 P0C880 135 aa9.08□□□□□ -0.96
PDLIM2-205ENST00000397761 KRTAP9-8Q9BYQ0 159 aa9.03□□□□□ -0.96
PDLIM2-205ENST00000397761 LORP23490 312 aaPredicted RBP9.02□□□□□ -0.96
PDLIM2-205ENST00000397761 LCE2DQ5TA82 110 aaPredicted RBP9□□□□□ -0.97
PDLIM2-205ENST00000397761 A0A1B0GU33 70 aa8.98□□□□□ -0.97
PDLIM2-205ENST00000397761 MT2AP02795 61 aa8.98□□□□□ -0.97
PDLIM2-205ENST00000397761 MT1FP04733 61 aa8.91□□□□□ -0.98
PDLIM2-205ENST00000397761 UQCR11O14957 56 aa8.9□□□□□ -0.98
PDLIM2-205ENST00000397761 KRTAP9-6A0A140TA67 174 aa8.89□□□□□ -0.99
PDLIM2-205ENST00000397761 FSIP2Q5CZC0 6907 aa8.89□□□□□ -0.99
PDLIM2-205ENST00000397761 CRIPTQ9P021 101 aa8.89□□□□□ -0.99
PDLIM2-205ENST00000397761 M0QZ58 72 aa8.87□□□□□ -0.99
PDLIM2-205ENST00000397761 KRTAP13-4Q3LI77 160 aa8.86□□□□□ -0.99
PDLIM2-205ENST00000397761 A6NED7 52 aa8.85□□□□□ -0.99
PDLIM2-205ENST00000397761 KRTAP10-10P60014 251 aa8.85□□□□□ -0.99
PDLIM2-205ENST00000397761 R4GN34 69 aa8.82□□□□□ -1
PDLIM2-205ENST00000397761 SPATA8Q6RVD6 105 aa8.81□□□□□ -1
PDLIM2-205ENST00000397761 MIR22HGQ0VDD5 57 aa8.77□□□□□ -1
PDLIM2-205ENST00000397761 SPRR2GQ9BYE4 73 aa8.76□□□□□ -1.01
PDLIM2-205ENST00000397761 KRTAP19-1Q8IUB9 90 aa8.73□□□□□ -1.01
PDLIM2-205ENST00000397761 CDC42SE1Q9NRR8 79 aa8.72□□□□□ -1.01
PDLIM2-205ENST00000397761 CRCT1Q9UGL9 99 aa8.72□□□□□ -1.01
PDLIM2-205ENST00000397761 KRTAP9-3Q9BYQ3 159 aa8.71□□□□□ -1.01
PDLIM2-205ENST00000397761 A8MU10 97 aa8.67□□□□□ -1.02
PDLIM2-205ENST00000397761 BRK1Q8WUW1 75 aa8.63□□□□□ -1.03
PDLIM2-205ENST00000397761 A0A0D9SG42 100 aa8.61□□□□□ -1.03
PDLIM2-205ENST00000397761 LINC01554Q52M75 96 aa8.59□□□□□ -1.03
PDLIM2-205ENST00000397761 A6NN06 94 aa8.58□□□□□ -1.04
PDLIM2-205ENST00000397761 KRTAP19-8Q3LI54 63 aa8.56□□□□□ -1.04
PDLIM2-205ENST00000397761 KRTAP12-1P59990 96 aa8.53□□□□□ -1.04
PDLIM2-205ENST00000397761 USH2AO75445 5202 aa8.52□□□□□ -1.04
PDLIM2-205ENST00000397761 LCE2BO14633 110 aa8.48□□□□□ -1.05
PDLIM2-205ENST00000397761 KRTAP12-2P59991 146 aa8.48□□□□□ -1.05
PDLIM2-205ENST00000397761 SSPOA2VEC9 5147 aa8.46□□□□□ -1.06
PDLIM2-205ENST00000397761 MT1BP07438 61 aa8.43□□□□□ -1.06
PDLIM2-205ENST00000397761 SPINT4Q6UDR6 99 aa8.42□□□□□ -1.06
PDLIM2-205ENST00000397761 PRO0628Q9UI54 55 aa8.41□□□□□ -1.06
PDLIM2-205ENST00000397761 K7ERS5 55 aa8.38□□□□□ -1.07
PDLIM2-205ENST00000397761 PLAC4Q8WY50 150 aa8.35□□□□□ -1.07
PDLIM2-205ENST00000397761 FCGBPQ9Y6R7 5405 aaPredicted RBP8.23□□□□□ -1.09
PDLIM2-205ENST00000397761 CAMK2N1Q7Z7J9 78 aa8.22□□□□□ -1.09
PDLIM2-205ENST00000397761 PMAIP1Q13794 54 aa8.16□□□□□ -1.1
PDLIM2-205ENST00000397761 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.13□□□□□ -1.11
PDLIM2-205ENST00000397761 MT1XP80297 61 aa8.12□□□□□ -1.11
PDLIM2-205ENST00000397761 KRTAP10-5P60370 271 aa8.1□□□□□ -1.11
PDLIM2-205ENST00000397761 C10orf95Q9H7T3 257 aa8.08□□□□□ -1.12
PDLIM2-205ENST00000397761 KRTAP19-6Q3LI70 58 aa8.06□□□□□ -1.12
PDLIM2-205ENST00000397761 ROMO1P60602 79 aa8.05□□□□□ -1.12
PDLIM2-205ENST00000397761 PRO2289Q9P1D8 64 aa8.01□□□□□ -1.13
PDLIM2-205ENST00000397761 KRTAP9-7A8MTY7 169 aa8□□□□□ -1.13
PDLIM2-205ENST00000397761 MACF1Q9UPN3 7388 aaKnown RBP8□□□□□ -1.13
PDLIM2-205ENST00000397761 SYNE2Q8WXH0 6885 aaKnown RBP7.97□□□□□ -1.13
PDLIM2-205ENST00000397761 SVIPQ8NHG7 77 aa7.87□□□□□ -1.15
PDLIM2-205ENST00000397761 KRTAP25-1Q3LHN0 102 aa7.85□□□□□ -1.15
PDLIM2-205ENST00000397761 TNP1P09430 55 aa7.83□□□□□ -1.16
PDLIM2-205ENST00000397761 KTN1-AS1Q86SY8 53 aa7.81□□□□□ -1.16
PDLIM2-205ENST00000397761 KRTAP10-7P60409 375 aaPredicted RBP7.75□□□□□ -1.17
PDLIM2-205ENST00000397761 KRTAP10-12P60413 245 aa7.72□□□□□ -1.17
PDLIM2-205ENST00000397761 PRAC1Q96KF2 57 aa7.65□□□□□ -1.18
PDLIM2-205ENST00000397761 KRTAP23-1A1A580 65 aa7.63□□□□□ -1.19
PDLIM2-205ENST00000397761 KRTAP6-3Q3LI67 103 aa7.62□□□□□ -1.19
PDLIM2-205ENST00000397761 PP632Q6XCG6 107 aa7.55□□□□□ -1.2
PDLIM2-205ENST00000397761 LCE3AQ5TA76 89 aa7.53□□□□□ -1.2
PDLIM2-205ENST00000397761 NEBP20929 6669 aa7.5□□□□□ -1.21
PDLIM2-205ENST00000397761 KRTAP4-8A0A0G2JLE6 195 aa7.48□□□□□ -1.21
PDLIM2-205ENST00000397761 KRTAP4-8Q9BYQ9 185 aa7.48□□□□□ -1.21
PDLIM2-205ENST00000397761 KRTAP8-1Q8IUC2 63 aa7.43□□□□□ -1.22
PDLIM2-205ENST00000397761 MUC12Q9UKN1 5478 aa7.42□□□□□ -1.22
PDLIM2-205ENST00000397761 KMT2DO14686 5537 aa7.37□□□□□ -1.23
PDLIM2-205ENST00000397761 KRTAP5-9P26371 169 aa7.31□□□□□ -1.24
PDLIM2-205ENST00000397761 KRTAP19-5Q3LI72 72 aa7.27□□□□□ -1.25
PDLIM2-205ENST00000397761 KRTAP19-7Q3SYF9 63 aa7.26□□□□□ -1.25
PDLIM2-205ENST00000397761 KRTAP12-3P60328 96 aa7.25□□□□□ -1.25
PDLIM2-205ENST00000397761 MDN1Q9NU22 5596 aa7.24□□□□□ -1.25
PDLIM2-205ENST00000397761 MT1EP04732 61 aa7.12□□□□□ -1.27
PDLIM2-205ENST00000397761 KRTAP15-1Q3LI76 137 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms