RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CHKB-CPT1BH3BT56 60 aa13.48□□□□□ -0.25
CPNE1-203ENST00000397442 KRTAP3-3Q9BYR6 98 aa13.47□□□□□ -0.25
CPNE1-203ENST00000397442 FLGP20930 4061 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-203ENST00000397442 RPS28P62857 69 aaKnown RBP13.41□□□□□ -0.26
CPNE1-203ENST00000397442 FAT4Q6V0I7 4981 aa13.4□□□□□ -0.26
CPNE1-203ENST00000397442 MT1HP80294 61 aa13.31□□□□□ -0.28
CPNE1-203ENST00000397442 SPTSSBQ8NFR3 76 aa13.26□□□□□ -0.29
CPNE1-203ENST00000397442 CSAG1Q6PB30 78 aa13.23□□□□□ -0.29
CPNE1-203ENST00000397442 SMIM26A0A096LP01 95 aa13.15□□□□□ -0.3
CPNE1-203ENST00000397442 M0R2T5 61 aa13.08□□□□□ -0.32
CPNE1-203ENST00000397442 LCE2AQ5TA79 106 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-203ENST00000397442 LINC01558Q9Y6Z2 57 aa13.01□□□□□ -0.33
CPNE1-203ENST00000397442 Q1T7F1 81 aa12.99□□□□□ -0.33
CPNE1-203ENST00000397442 H0YAA0 97 aa12.94□□□□□ -0.34
CPNE1-203ENST00000397442 KRTAP3-2Q9BYR7 98 aa12.92□□□□□ -0.34
CPNE1-203ENST00000397442 V9GYY9 64 aa12.92□□□□□ -0.34
CPNE1-203ENST00000397442 ADM2Q7Z4H4 148 aa12.88□□□□□ -0.35
CPNE1-203ENST00000397442 A0A1B0GU69 56 aa12.86□□□□□ -0.35
CPNE1-203ENST00000397442 KRTAP10-6P60371 365 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-203ENST00000397442 SEC61GP60059 68 aa12.83□□□□□ -0.36
CPNE1-203ENST00000397442 P0C880 135 aa12.81□□□□□ -0.36
CPNE1-203ENST00000397442 PRR15LQ9BU68 103 aa12.81□□□□□ -0.36
CPNE1-203ENST00000397442 LORP23490 312 aaPredicted RBP12.8□□□□□ -0.36
CPNE1-203ENST00000397442 KRTAP9-8Q9BYQ0 159 aa12.8□□□□□ -0.36
CPNE1-203ENST00000397442 PSPHP1O15172 72 aa12.78□□□□□ -0.36
CPNE1-203ENST00000397442 MT2AP02795 61 aa12.72□□□□□ -0.37
CPNE1-203ENST00000397442 Q5VV11 94 aa12.69□□□□□ -0.38
CPNE1-203ENST00000397442 MT1FP04733 61 aa12.65□□□□□ -0.38
CPNE1-203ENST00000397442 A0A1B0GU33 70 aa12.58□□□□□ -0.4
CPNE1-203ENST00000397442 KRTAP10-10P60014 251 aa12.56□□□□□ -0.4
CPNE1-203ENST00000397442 KRTAP13-4Q3LI77 160 aa12.48□□□□□ -0.41
CPNE1-203ENST00000397442 CRIPTQ9P021 101 aa12.45□□□□□ -0.42
CPNE1-203ENST00000397442 UQCR11O14957 56 aa12.42□□□□□ -0.42
CPNE1-203ENST00000397442 R4GN34 69 aa12.42□□□□□ -0.42
CPNE1-203ENST00000397442 SPATA8Q6RVD6 105 aa12.42□□□□□ -0.42
CPNE1-203ENST00000397442 M0QZ58 72 aa12.41□□□□□ -0.42
CPNE1-203ENST00000397442 A6NED7 52 aa12.35□□□□□ -0.43
CPNE1-203ENST00000397442 KRTAP9-3Q9BYQ3 159 aa12.35□□□□□ -0.43
CPNE1-203ENST00000397442 KRTAP19-1Q8IUB9 90 aa12.34□□□□□ -0.43
CPNE1-203ENST00000397442 SPRR2GQ9BYE4 73 aa12.32□□□□□ -0.44
CPNE1-203ENST00000397442 MIR22HGQ0VDD5 57 aa12.26□□□□□ -0.45
CPNE1-203ENST00000397442 A8MU10 97 aa12.21□□□□□ -0.45
CPNE1-203ENST00000397442 LINC01554Q52M75 96 aa12.18□□□□□ -0.46
CPNE1-203ENST00000397442 A0A0D9SG42 100 aa12.16□□□□□ -0.46
CPNE1-203ENST00000397442 CDC42SE1Q9NRR8 79 aa12.12□□□□□ -0.47
CPNE1-203ENST00000397442 LCE2BO14633 110 aa12.06□□□□□ -0.48
CPNE1-203ENST00000397442 KRTAP19-8Q3LI54 63 aa12.04□□□□□ -0.48
CPNE1-203ENST00000397442 BRK1Q8WUW1 75 aa12.01□□□□□ -0.49
CPNE1-203ENST00000397442 A6NN06 94 aa11.98□□□□□ -0.49
CPNE1-203ENST00000397442 KRTAP12-1P59990 96 aa11.97□□□□□ -0.49
CPNE1-203ENST00000397442 MT1BP07438 61 aa11.93□□□□□ -0.5
CPNE1-203ENST00000397442 KRTAP12-2P59991 146 aa11.93□□□□□ -0.5
CPNE1-203ENST00000397442 LCE2DQ5TA82 110 aaPredicted RBP11.89□□□□□ -0.51
CPNE1-203ENST00000397442 SPINT4Q6UDR6 99 aa11.87□□□□□ -0.51
CPNE1-203ENST00000397442 PLAC4Q8WY50 150 aa11.77□□□□□ -0.53
CPNE1-203ENST00000397442 USH2AO75445 5202 aa11.75□□□□□ -0.53
CPNE1-203ENST00000397442 K7ERS5 55 aa11.7□□□□□ -0.54
CPNE1-203ENST00000397442 PRO0628Q9UI54 55 aa11.61□□□□□ -0.55
CPNE1-203ENST00000397442 CAMK2N1Q7Z7J9 78 aa11.59□□□□□ -0.55
CPNE1-203ENST00000397442 KRTAP9-2Q9BYQ4 174 aa11.58□□□□□ -0.56
CPNE1-203ENST00000397442 MT1XP80297 61 aa11.47□□□□□ -0.57
CPNE1-203ENST00000397442 FSIP2Q5CZC0 6907 aa11.46□□□□□ -0.57
CPNE1-203ENST00000397442 KRTAP10-5P60370 271 aa11.44□□□□□ -0.58
CPNE1-203ENST00000397442 SSPOA2VEC9 5147 aa11.42□□□□□ -0.58
CPNE1-203ENST00000397442 KRTAP19-6Q3LI70 58 aa11.36□□□□□ -0.59
CPNE1-203ENST00000397442 C10orf95Q9H7T3 257 aa11.36□□□□□ -0.59
CPNE1-203ENST00000397442 PMAIP1Q13794 54 aa11.35□□□□□ -0.59
CPNE1-203ENST00000397442 PRO2289Q9P1D8 64 aa11.29□□□□□ -0.6
CPNE1-203ENST00000397442 ROMO1P60602 79 aa11.24□□□□□ -0.61
CPNE1-203ENST00000397442 CRCT1Q9UGL9 99 aa11.11□□□□□ -0.63
CPNE1-203ENST00000397442 TNP1P09430 55 aa10.99□□□□□ -0.65
CPNE1-203ENST00000397442 KRTAP10-7P60409 375 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-203ENST00000397442 FCGBPQ9Y6R7 5405 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-203ENST00000397442 KRTAP25-1Q3LHN0 102 aa10.95□□□□□ -0.66
CPNE1-203ENST00000397442 KRTAP10-12P60413 245 aa10.87□□□□□ -0.67
CPNE1-203ENST00000397442 KTN1-AS1Q86SY8 53 aa10.79□□□□□ -0.68
CPNE1-203ENST00000397442 KRTAP9-6A0A140TA67 174 aa10.75□□□□□ -0.69
CPNE1-203ENST00000397442 PRAC1Q96KF2 57 aa10.7□□□□□ -0.7
CPNE1-203ENST00000397442 KRTAP4-8A0A0G2JLE6 195 aa10.64□□□□□ -0.71
CPNE1-203ENST00000397442 KRTAP4-8Q9BYQ9 185 aa10.64□□□□□ -0.71
CPNE1-203ENST00000397442 LCE3AQ5TA76 89 aa10.63□□□□□ -0.71
CPNE1-203ENST00000397442 KRTAP23-1A1A580 65 aa10.59□□□□□ -0.71
CPNE1-203ENST00000397442 KMT2DO14686 5537 aa10.59□□□□□ -0.71
CPNE1-203ENST00000397442 PP632Q6XCG6 107 aa10.49□□□□□ -0.73
CPNE1-203ENST00000397442 MACF1Q9UPN3 7388 aaKnown RBP10.48□□□□□ -0.73
CPNE1-203ENST00000397442 KRTAP8-1Q8IUC2 63 aa10.41□□□□□ -0.74
CPNE1-203ENST00000397442 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.31□□□□□ -0.76
CPNE1-203ENST00000397442 KRTAP19-5Q3LI72 72 aa10.28□□□□□ -0.76
CPNE1-203ENST00000397442 KRTAP19-7Q3SYF9 63 aa10.25□□□□□ -0.77
CPNE1-203ENST00000397442 KRTAP12-3P60328 96 aa10.2□□□□□ -0.78
CPNE1-203ENST00000397442 SYNE2Q8WXH0 6885 aaKnown RBP10.2□□□□□ -0.78
CPNE1-203ENST00000397442 SVIPQ8NHG7 77 aa10.15□□□□□ -0.79
CPNE1-203ENST00000397442 MT1EP04732 61 aa10.06□□□□□ -0.8
CPNE1-203ENST00000397442 KRTAP5-9P26371 169 aa10.06□□□□□ -0.8
CPNE1-203ENST00000397442 SPRR2FQ96RM1 72 aa10.04□□□□□ -0.8
CPNE1-203ENST00000397442 KRTAP6-3Q3LI67 103 aa9.98□□□□□ -0.81
CPNE1-203ENST00000397442 KRTAP15-1Q3LI76 137 aa9.93□□□□□ -0.82
CPNE1-203ENST00000397442 MUC12Q9UKN1 5478 aa9.88□□□□□ -0.83
CPNE1-203ENST00000397442 MT1LQ93083 61 aa9.82□□□□□ -0.84
CPNE1-203ENST00000397442 KRTAP9-7A8MTY7 169 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms