RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 TRAV7A0A075B6U4 112 aa9.89□□□□□ -0.83
TSPAN4-206ENST00000397408 A8MUN3 132 aa9.89□□□□□ -0.83
TSPAN4-206ENST00000397408 LCE2BO14633 110 aa9.88□□□□□ -0.83
TSPAN4-206ENST00000397408 USH2AO75445 5202 aa9.87□□□□□ -0.83
TSPAN4-206ENST00000397408 NDUFC1O43677 76 aa9.78□□□□□ -0.84
TSPAN4-206ENST00000397408 DMAC1Q96GE9 116 aa9.73□□□□□ -0.85
TSPAN4-206ENST00000397408 SSPOA2VEC9 5147 aa9.71□□□□□ -0.85
TSPAN4-206ENST00000397408 SERP2Q8N6R1 65 aa9.67□□□□□ -0.86
TSPAN4-206ENST00000397408 SNURFQ9Y675 71 aa9.67□□□□□ -0.86
TSPAN4-206ENST00000397408 KRTAP19-1Q8IUB9 90 aa9.63□□□□□ -0.87
TSPAN4-206ENST00000397408 C20orf197Q8N268 126 aa9.62□□□□□ -0.87
TSPAN4-206ENST00000397408 H0YAA0 97 aa9.59□□□□□ -0.87
TSPAN4-206ENST00000397408 ACYP2P14621 99 aa9.55□□□□□ -0.88
TSPAN4-206ENST00000397408 SPRR2GQ9BYE4 73 aa9.54□□□□□ -0.88
TSPAN4-206ENST00000397408 ADM2Q7Z4H4 148 aa9.53□□□□□ -0.88
TSPAN4-206ENST00000397408 CRIPTQ9P021 101 aa9.49□□□□□ -0.89
TSPAN4-206ENST00000397408 COX7CP15954 63 aa9.47□□□□□ -0.89
TSPAN4-206ENST00000397408 KRTAP19-6Q3LI70 58 aa9.47□□□□□ -0.89
TSPAN4-206ENST00000397408 SPANXA2-OT1Q8N9U9 137 aa9.47□□□□□ -0.89
TSPAN4-206ENST00000397408 FCGBPQ9Y6R7 5405 aaPredicted RBP9.45□□□□□ -0.9
TSPAN4-206ENST00000397408 KRTAP19-8Q3LI54 63 aa9.43□□□□□ -0.9
TSPAN4-206ENST00000397408 Q5VV11 94 aa9.42□□□□□ -0.9
TSPAN4-206ENST00000397408 CHKB-CPT1BH3BT56 60 aa9.4□□□□□ -0.9
TSPAN4-206ENST00000397408 MT1BP07438 61 aa9.4□□□□□ -0.9
TSPAN4-206ENST00000397408 SPTSSBQ8NFR3 76 aa9.38□□□□□ -0.91
TSPAN4-206ENST00000397408 P0C880 135 aa9.36□□□□□ -0.91
TSPAN4-206ENST00000397408 ANAPC13Q9BS18 74 aa9.31□□□□□ -0.92
TSPAN4-206ENST00000397408 KRTAP3-2Q9BYR7 98 aa9.31□□□□□ -0.92
TSPAN4-206ENST00000397408 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.29□□□□□ -0.92
TSPAN4-206ENST00000397408 CYSTM1Q9H1C7 97 aa9.29□□□□□ -0.92
TSPAN4-206ENST00000397408 R4GN34 69 aa9.26□□□□□ -0.93
TSPAN4-206ENST00000397408 H7BZZ5 65 aa9.25□□□□□ -0.93
TSPAN4-206ENST00000397408 M0QZ58 72 aa9.21□□□□□ -0.94
TSPAN4-206ENST00000397408 COA5Q86WW8 74 aa9.21□□□□□ -0.94
TSPAN4-206ENST00000397408 A6NN06 94 aa9.18□□□□□ -0.94
TSPAN4-206ENST00000397408 MACF1Q9UPN3 7388 aaKnown RBP9.14□□□□□ -0.95
TSPAN4-206ENST00000397408 CCDC179H3BU77 68 aa9.12□□□□□ -0.95
TSPAN4-206ENST00000397408 KRTAP10-5P60370 271 aa9.11□□□□□ -0.95
TSPAN4-206ENST00000397408 KRTAP9-7A8MTY7 169 aa9.06□□□□□ -0.96
TSPAN4-206ENST00000397408 LINC01554Q52M75 96 aa9.06□□□□□ -0.96
TSPAN4-206ENST00000397408 PLAC4Q8WY50 150 aa9.04□□□□□ -0.96
TSPAN4-206ENST00000397408 SYNE2Q8WXH0 6885 aaKnown RBP8.98□□□□□ -0.97
TSPAN4-206ENST00000397408 SEC61GP60059 68 aa8.91□□□□□ -0.98
TSPAN4-206ENST00000397408 ATP5EP56381 51 aaPredicted RBP8.9□□□□□ -0.98
TSPAN4-206ENST00000397408 MT1XP80297 61 aa8.9□□□□□ -0.98
TSPAN4-206ENST00000397408 PRO2289Q9P1D8 64 aa8.9□□□□□ -0.98
TSPAN4-206ENST00000397408 SERP1Q9Y6X1 66 aa8.89□□□□□ -0.99
TSPAN4-206ENST00000397408 KRTAP13-4Q3LI77 160 aa8.87□□□□□ -0.99
TSPAN4-206ENST00000397408 TMEM258P61165 79 aa8.79□□□□□ -1
TSPAN4-206ENST00000397408 KRTAP6-3Q3LI67 103 aa8.77□□□□□ -1.01
TSPAN4-206ENST00000397408 A0A1B0GU33 70 aa8.73□□□□□ -1.01
TSPAN4-206ENST00000397408 A0A1B0GU69 56 aa8.73□□□□□ -1.01
TSPAN4-206ENST00000397408 PCP4P48539 62 aa8.71□□□□□ -1.01
TSPAN4-206ENST00000397408 SPATA8Q6RVD6 105 aa8.69□□□□□ -1.02
TSPAN4-206ENST00000397408 A0A0D9SG42 100 aa8.65□□□□□ -1.02
TSPAN4-206ENST00000397408 KRTAP12-2P59991 146 aa8.6□□□□□ -1.03
TSPAN4-206ENST00000397408 CAMK2N1Q7Z7J9 78 aa8.57□□□□□ -1.04
TSPAN4-206ENST00000397408 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
TSPAN4-206ENST00000397408 LINC01558Q9Y6Z2 57 aa8.54□□□□□ -1.04
TSPAN4-206ENST00000397408 KMT2DO14686 5537 aa8.53□□□□□ -1.04
TSPAN4-206ENST00000397408 KRTAP5-9P26371 169 aa8.51□□□□□ -1.05
TSPAN4-206ENST00000397408 KRTAP10-7P60409 375 aaPredicted RBP8.5□□□□□ -1.05
TSPAN4-206ENST00000397408 SPINT4Q6UDR6 99 aa8.5□□□□□ -1.05
TSPAN4-206ENST00000397408 SVIPQ8NHG7 77 aa8.48□□□□□ -1.05
TSPAN4-206ENST00000397408 SMIM26A0A096LP01 95 aa8.47□□□□□ -1.05
TSPAN4-206ENST00000397408 KRTAP12-1P59990 96 aa8.46□□□□□ -1.05
TSPAN4-206ENST00000397408 A8MU10 97 aa8.44□□□□□ -1.06
TSPAN4-206ENST00000397408 KRTAP10-12P60413 245 aa8.44□□□□□ -1.06
TSPAN4-206ENST00000397408 KRTAP8-1Q8IUC2 63 aa8.44□□□□□ -1.06
TSPAN4-206ENST00000397408 MUC12Q9UKN1 5478 aa8.43□□□□□ -1.06
TSPAN4-206ENST00000397408 NEBP20929 6669 aa8.42□□□□□ -1.06
TSPAN4-206ENST00000397408 KRTAP4-8A0A0G2JLE6 195 aa8.4□□□□□ -1.06
TSPAN4-206ENST00000397408 KRTAP4-8Q9BYQ9 185 aa8.4□□□□□ -1.06
TSPAN4-206ENST00000397408 SPRR2FQ96RM1 72 aa8.37□□□□□ -1.07
TSPAN4-206ENST00000397408 UQCR11O14957 56 aa8.28□□□□□ -1.08
TSPAN4-206ENST00000397408 MDN1Q9NU22 5596 aa8.28□□□□□ -1.08
TSPAN4-206ENST00000397408 V9GYY9 64 aa8.24□□□□□ -1.09
TSPAN4-206ENST00000397408 Q1T7F1 81 aa8.2□□□□□ -1.1
TSPAN4-206ENST00000397408 PSPHP1O15172 72 aa8.17□□□□□ -1.1
TSPAN4-206ENST00000397408 SPRR2EP22531 72 aa8.17□□□□□ -1.1
TSPAN4-206ENST00000397408 SPRR2BP35325 72 aa8.17□□□□□ -1.1
TSPAN4-206ENST00000397408 SPRR2AP35326 72 aa8.17□□□□□ -1.1
TSPAN4-206ENST00000397408 MIR22HGQ0VDD5 57 aa8.13□□□□□ -1.11
TSPAN4-206ENST00000397408 LCE1AQ5T7P2 110 aa8.09□□□□□ -1.11
TSPAN4-206ENST00000397408 RPS28P62857 69 aaKnown RBP8.08□□□□□ -1.12
TSPAN4-206ENST00000397408 C10orf95Q9H7T3 257 aa8.06□□□□□ -1.12
TSPAN4-206ENST00000397408 KRTAP20-1Q3LI63 56 aa7.99□□□□□ -1.13
TSPAN4-206ENST00000397408 TNP1P09430 55 aa7.97□□□□□ -1.13
TSPAN4-206ENST00000397408 KRTAP19-7Q3SYF9 63 aa7.95□□□□□ -1.14
TSPAN4-206ENST00000397408 A6NED7 52 aa7.92□□□□□ -1.14
TSPAN4-206ENST00000397408 K7ERS5 55 aa7.91□□□□□ -1.14
TSPAN4-206ENST00000397408 SPRR2DP22532 72 aa7.88□□□□□ -1.15
TSPAN4-206ENST00000397408 MT1EP04732 61 aa7.86□□□□□ -1.15
TSPAN4-206ENST00000397408 KRTAP19-5Q3LI72 72 aa7.85□□□□□ -1.15
TSPAN4-206ENST00000397408 KRTAP2-3P0C7H8 128 aa7.84□□□□□ -1.15
TSPAN4-206ENST00000397408 LCE3AQ5TA76 89 aa7.84□□□□□ -1.15
TSPAN4-206ENST00000397408 KRTAP2-4Q9BYR9 128 aa7.84□□□□□ -1.15
TSPAN4-206ENST00000397408 KRTAP19-3Q7Z4W3 81 aa7.73□□□□□ -1.17
TSPAN4-206ENST00000397408 LCE5AQ5TCM9 118 aa7.69□□□□□ -1.18
TSPAN4-206ENST00000397408 KRTAP25-1Q3LHN0 102 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms