RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 FLGP20930 4061 aaPredicted RBP11.51□□□□□ -0.57
TSPAN4-202ENST00000397396 LCA10Q71F78 164 aa11.51□□□□□ -0.57
TSPAN4-202ENST00000397396 COA5Q86WW8 74 aa11.49□□□□□ -0.57
TSPAN4-202ENST00000397396 M0R2T5 61 aa11.47□□□□□ -0.57
TSPAN4-202ENST00000397396 SPTSSBQ8NFR3 76 aa11.47□□□□□ -0.57
TSPAN4-202ENST00000397396 CSAG1Q6PB30 78 aa11.44□□□□□ -0.58
TSPAN4-202ENST00000397396 KRTAP3-3Q9BYR6 98 aa11.38□□□□□ -0.59
TSPAN4-202ENST00000397396 LCE2AQ5TA79 106 aaPredicted RBP11.35□□□□□ -0.59
TSPAN4-202ENST00000397396 SERP1Q9Y6X1 66 aa11.35□□□□□ -0.59
TSPAN4-202ENST00000397396 KRTAP10-6P60371 365 aaPredicted RBP11.18□□□□□ -0.62
TSPAN4-202ENST00000397396 H0YAA0 97 aa11.17□□□□□ -0.62
TSPAN4-202ENST00000397396 RPS28P62857 69 aaKnown RBP11.13□□□□□ -0.63
TSPAN4-202ENST00000397396 LORP23490 312 aaPredicted RBP11.11□□□□□ -0.63
TSPAN4-202ENST00000397396 SEC61GP60059 68 aa11.04□□□□□ -0.64
TSPAN4-202ENST00000397396 ADM2Q7Z4H4 148 aa11.02□□□□□ -0.65
TSPAN4-202ENST00000397396 KRTAP9-8Q9BYQ0 159 aa11.02□□□□□ -0.65
TSPAN4-202ENST00000397396 SMIM26A0A096LP01 95 aa10.99□□□□□ -0.65
TSPAN4-202ENST00000397396 MT2AP02795 61 aa10.98□□□□□ -0.65
TSPAN4-202ENST00000397396 V9GYY9 64 aa10.95□□□□□ -0.66
TSPAN4-202ENST00000397396 LINC01558Q9Y6Z2 57 aa10.93□□□□□ -0.66
TSPAN4-202ENST00000397396 A0A1B0GU69 56 aa10.92□□□□□ -0.66
TSPAN4-202ENST00000397396 KRTAP10-10P60014 251 aa10.91□□□□□ -0.66
TSPAN4-202ENST00000397396 PRR15LQ9BU68 103 aa10.91□□□□□ -0.66
TSPAN4-202ENST00000397396 KRTAP3-2Q9BYR7 98 aa10.89□□□□□ -0.67
TSPAN4-202ENST00000397396 MT1FP04733 61 aa10.88□□□□□ -0.67
TSPAN4-202ENST00000397396 CRIPTQ9P021 101 aa10.86□□□□□ -0.67
TSPAN4-202ENST00000397396 Q1T7F1 81 aa10.85□□□□□ -0.67
TSPAN4-202ENST00000397396 P0C880 135 aa10.84□□□□□ -0.67
TSPAN4-202ENST00000397396 KRTAP9-2Q9BYQ4 174 aa10.72□□□□□ -0.69
TSPAN4-202ENST00000397396 R4GN34 69 aa10.72□□□□□ -0.69
TSPAN4-202ENST00000397396 A0A1B0GU33 70 aa10.68□□□□□ -0.7
TSPAN4-202ENST00000397396 M0QZ58 72 aa10.68□□□□□ -0.7
TSPAN4-202ENST00000397396 KRTAP9-3Q9BYQ3 159 aa10.65□□□□□ -0.7
TSPAN4-202ENST00000397396 LCE2DQ5TA82 110 aaPredicted RBP10.64□□□□□ -0.71
TSPAN4-202ENST00000397396 PSPHP1O15172 72 aa10.62□□□□□ -0.71
TSPAN4-202ENST00000397396 SPRR2GQ9BYE4 73 aa10.62□□□□□ -0.71
TSPAN4-202ENST00000397396 KRTAP19-1Q8IUB9 90 aa10.56□□□□□ -0.72
TSPAN4-202ENST00000397396 Q5VV11 94 aa10.55□□□□□ -0.72
TSPAN4-202ENST00000397396 UQCR11O14957 56 aa10.53□□□□□ -0.72
TSPAN4-202ENST00000397396 KRTAP13-4Q3LI77 160 aa10.47□□□□□ -0.73
TSPAN4-202ENST00000397396 SPATA8Q6RVD6 105 aa10.43□□□□□ -0.74
TSPAN4-202ENST00000397396 LINC01554Q52M75 96 aa10.42□□□□□ -0.74
TSPAN4-202ENST00000397396 KRTAP19-8Q3LI54 63 aa10.39□□□□□ -0.75
TSPAN4-202ENST00000397396 LCE2BO14633 110 aa10.38□□□□□ -0.75
TSPAN4-202ENST00000397396 A6NED7 52 aa10.37□□□□□ -0.75
TSPAN4-202ENST00000397396 A6NN06 94 aa10.34□□□□□ -0.75
TSPAN4-202ENST00000397396 MIR22HGQ0VDD5 57 aa10.34□□□□□ -0.75
TSPAN4-202ENST00000397396 FSIP2Q5CZC0 6907 aa10.34□□□□□ -0.75
TSPAN4-202ENST00000397396 A0A0D9SG42 100 aa10.3□□□□□ -0.76
TSPAN4-202ENST00000397396 PLAC4Q8WY50 150 aa10.25□□□□□ -0.77
TSPAN4-202ENST00000397396 KRTAP9-6A0A140TA67 174 aa10.22□□□□□ -0.77
TSPAN4-202ENST00000397396 A8MU10 97 aa10.22□□□□□ -0.77
TSPAN4-202ENST00000397396 MT1BP07438 61 aa10.22□□□□□ -0.77
TSPAN4-202ENST00000397396 USH2AO75445 5202 aa10.21□□□□□ -0.78
TSPAN4-202ENST00000397396 CRCT1Q9UGL9 99 aa10.19□□□□□ -0.78
TSPAN4-202ENST00000397396 CDC42SE1Q9NRR8 79 aa10.13□□□□□ -0.79
TSPAN4-202ENST00000397396 SPINT4Q6UDR6 99 aa10.12□□□□□ -0.79
TSPAN4-202ENST00000397396 KRTAP12-1P59990 96 aa10.1□□□□□ -0.79
TSPAN4-202ENST00000397396 K7ERS5 55 aa10.07□□□□□ -0.8
TSPAN4-202ENST00000397396 SSPOA2VEC9 5147 aa10.05□□□□□ -0.8
TSPAN4-202ENST00000397396 KRTAP12-2P59991 146 aa10.04□□□□□ -0.8
TSPAN4-202ENST00000397396 CAMK2N1Q7Z7J9 78 aa10□□□□□ -0.81
TSPAN4-202ENST00000397396 KRTAP19-6Q3LI70 58 aa9.94□□□□□ -0.82
TSPAN4-202ENST00000397396 BRK1Q8WUW1 75 aa9.94□□□□□ -0.82
TSPAN4-202ENST00000397396 PRO2289Q9P1D8 64 aa9.93□□□□□ -0.82
TSPAN4-202ENST00000397396 KRTAP10-5P60370 271 aa9.84□□□□□ -0.83
TSPAN4-202ENST00000397396 MT1XP80297 61 aa9.81□□□□□ -0.84
TSPAN4-202ENST00000397396 FCGBPQ9Y6R7 5405 aaPredicted RBP9.75□□□□□ -0.85
TSPAN4-202ENST00000397396 C10orf95Q9H7T3 257 aa9.56□□□□□ -0.88
TSPAN4-202ENST00000397396 PRO0628Q9UI54 55 aa9.55□□□□□ -0.88
TSPAN4-202ENST00000397396 ROMO1P60602 79 aa9.49□□□□□ -0.89
TSPAN4-202ENST00000397396 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.46□□□□□ -0.9
TSPAN4-202ENST00000397396 TNP1P09430 55 aa9.46□□□□□ -0.9
TSPAN4-202ENST00000397396 PMAIP1Q13794 54 aa9.39□□□□□ -0.91
TSPAN4-202ENST00000397396 KRTAP25-1Q3LHN0 102 aa9.38□□□□□ -0.91
TSPAN4-202ENST00000397396 KRTAP10-7P60409 375 aaPredicted RBP9.37□□□□□ -0.91
TSPAN4-202ENST00000397396 KRTAP10-12P60413 245 aa9.35□□□□□ -0.91
TSPAN4-202ENST00000397396 MACF1Q9UPN3 7388 aaKnown RBP9.34□□□□□ -0.91
TSPAN4-202ENST00000397396 KRTAP9-7A8MTY7 169 aa9.24□□□□□ -0.93
TSPAN4-202ENST00000397396 SYNE2Q8WXH0 6885 aaKnown RBP9.2□□□□□ -0.94
TSPAN4-202ENST00000397396 KRTAP23-1A1A580 65 aa9.09□□□□□ -0.95
TSPAN4-202ENST00000397396 KRTAP4-8A0A0G2JLE6 195 aa9.05□□□□□ -0.96
TSPAN4-202ENST00000397396 KRTAP8-1Q8IUC2 63 aa9.05□□□□□ -0.96
TSPAN4-202ENST00000397396 KRTAP4-8Q9BYQ9 185 aa9.05□□□□□ -0.96
TSPAN4-202ENST00000397396 LCE3AQ5TA76 89 aa9.03□□□□□ -0.96
TSPAN4-202ENST00000397396 PP632Q6XCG6 107 aa9.03□□□□□ -0.96
TSPAN4-202ENST00000397396 KMT2DO14686 5537 aa8.99□□□□□ -0.97
TSPAN4-202ENST00000397396 KRTAP6-3Q3LI67 103 aa8.99□□□□□ -0.97
TSPAN4-202ENST00000397396 KTN1-AS1Q86SY8 53 aa8.91□□□□□ -0.98
TSPAN4-202ENST00000397396 KRTAP5-9P26371 169 aa8.81□□□□□ -1
TSPAN4-202ENST00000397396 KRTAP19-5Q3LI72 72 aa8.77□□□□□ -1.01
TSPAN4-202ENST00000397396 SPRR2FQ96RM1 72 aa8.77□□□□□ -1.01
TSPAN4-202ENST00000397396 KRTAP19-7Q3SYF9 63 aa8.75□□□□□ -1.01
TSPAN4-202ENST00000397396 PRAC1Q96KF2 57 aa8.74□□□□□ -1.01
TSPAN4-202ENST00000397396 MUC12Q9UKN1 5478 aa8.73□□□□□ -1.01
TSPAN4-202ENST00000397396 KRTAP12-3P60328 96 aa8.73□□□□□ -1.01
TSPAN4-202ENST00000397396 MT1EP04732 61 aa8.65□□□□□ -1.02
TSPAN4-202ENST00000397396 MDN1Q9NU22 5596 aa8.59□□□□□ -1.03
TSPAN4-202ENST00000397396 NEBP20929 6669 aa8.59□□□□□ -1.04
TSPAN4-202ENST00000397396 KRTAP15-1Q3LI76 137 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms