RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 MT1FP04733 61 aa7.76□□□□□ -1.17
AP1S3-202ENST00000396653 SPANXA2-OT1Q8N9U9 137 aa7.75□□□□□ -1.17
AP1S3-202ENST00000396653 ANAPC13Q9BS18 74 aa7.75□□□□□ -1.17
AP1S3-202ENST00000396653 KRTAP9-2Q9BYQ4 174 aa7.75□□□□□ -1.17
AP1S3-202ENST00000396653 NDUFC1O43677 76 aa7.74□□□□□ -1.17
AP1S3-202ENST00000396653 KRTAP10-10P60014 251 aa7.72□□□□□ -1.17
AP1S3-202ENST00000396653 ACYP2P14621 99 aa7.7□□□□□ -1.18
AP1S3-202ENST00000396653 KRTAP9-3Q9BYQ3 159 aa7.63□□□□□ -1.19
AP1S3-202ENST00000396653 H0YAA0 97 aa7.62□□□□□ -1.19
AP1S3-202ENST00000396653 H7BZZ5 65 aa7.62□□□□□ -1.19
AP1S3-202ENST00000396653 CYSTM1Q9H1C7 97 aa7.6□□□□□ -1.19
AP1S3-202ENST00000396653 CCDC179H3BU77 68 aa7.56□□□□□ -1.2
AP1S3-202ENST00000396653 CHKB-CPT1BH3BT56 60 aa7.55□□□□□ -1.2
AP1S3-202ENST00000396653 SPTSSBQ8NFR3 76 aa7.55□□□□□ -1.2
AP1S3-202ENST00000396653 LCE2BO14633 110 aa7.49□□□□□ -1.21
AP1S3-202ENST00000396653 COA5Q86WW8 74 aa7.48□□□□□ -1.21
AP1S3-202ENST00000396653 CRIPTQ9P021 101 aa7.48□□□□□ -1.21
AP1S3-202ENST00000396653 ADM2Q7Z4H4 148 aa7.47□□□□□ -1.21
AP1S3-202ENST00000396653 ATP5EP56381 51 aaPredicted RBP7.43□□□□□ -1.22
AP1S3-202ENST00000396653 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
AP1S3-202ENST00000396653 SPRR2GQ9BYE4 73 aa7.43□□□□□ -1.22
AP1S3-202ENST00000396653 CRCT1Q9UGL9 99 aa7.39□□□□□ -1.23
AP1S3-202ENST00000396653 KRTAP3-2Q9BYR7 98 aa7.37□□□□□ -1.23
AP1S3-202ENST00000396653 USH2AO75445 5202 aa7.37□□□□□ -1.23
AP1S3-202ENST00000396653 KRTAP9-6A0A140TA67 174 aa7.36□□□□□ -1.23
AP1S3-202ENST00000396653 P0C880 135 aa7.36□□□□□ -1.23
AP1S3-202ENST00000396653 TMEM258P61165 79 aa7.36□□□□□ -1.23
AP1S3-202ENST00000396653 FSIP2Q5CZC0 6907 aa7.34□□□□□ -1.24
AP1S3-202ENST00000396653 KRTAP19-8Q3LI54 63 aa7.32□□□□□ -1.24
AP1S3-202ENST00000396653 Q5VV11 94 aa7.27□□□□□ -1.25
AP1S3-202ENST00000396653 R4GN34 69 aa7.27□□□□□ -1.25
AP1S3-202ENST00000396653 MT1BP07438 61 aa7.24□□□□□ -1.25
AP1S3-202ENST00000396653 SSPOA2VEC9 5147 aa7.22□□□□□ -1.25
AP1S3-202ENST00000396653 M0QZ58 72 aa7.22□□□□□ -1.25
AP1S3-202ENST00000396653 KRTAP19-6Q3LI70 58 aa7.21□□□□□ -1.26
AP1S3-202ENST00000396653 SEC61GP60059 68 aa7.19□□□□□ -1.26
AP1S3-202ENST00000396653 SERP1Q9Y6X1 66 aa7.17□□□□□ -1.26
AP1S3-202ENST00000396653 PCP4P48539 62 aa7.14□□□□□ -1.27
AP1S3-202ENST00000396653 A0A1B0GU69 56 aa7.08□□□□□ -1.28
AP1S3-202ENST00000396653 LINC01554Q52M75 96 aa7.06□□□□□ -1.28
AP1S3-202ENST00000396653 KRTAP13-4Q3LI77 160 aa7.04□□□□□ -1.28
AP1S3-202ENST00000396653 PLAC4Q8WY50 150 aa7.04□□□□□ -1.28
AP1S3-202ENST00000396653 LINC01558Q9Y6Z2 57 aa7.03□□□□□ -1.28
AP1S3-202ENST00000396653 FCGBPQ9Y6R7 5405 aaPredicted RBP7.02□□□□□ -1.29
AP1S3-202ENST00000396653 A0A1B0GU33 70 aa7.02□□□□□ -1.29
AP1S3-202ENST00000396653 A6NN06 94 aa7.01□□□□□ -1.29
AP1S3-202ENST00000396653 KRTAP10-5P60370 271 aa7.01□□□□□ -1.29
AP1S3-202ENST00000396653 PRR15LQ9BU68 103 aa7.01□□□□□ -1.29
AP1S3-202ENST00000396653 SPATA8Q6RVD6 105 aa6.91□□□□□ -1.3
AP1S3-202ENST00000396653 PRO2289Q9P1D8 64 aa6.91□□□□□ -1.3
AP1S3-202ENST00000396653 V9GYY9 64 aa6.89□□□□□ -1.31
AP1S3-202ENST00000396653 MT1XP80297 61 aa6.88□□□□□ -1.31
AP1S3-202ENST00000396653 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.87□□□□□ -1.31
AP1S3-202ENST00000396653 RPS28P62857 69 aaKnown RBP6.86□□□□□ -1.31
AP1S3-202ENST00000396653 SMIM26A0A096LP01 95 aa6.85□□□□□ -1.31
AP1S3-202ENST00000396653 A0A0D9SG42 100 aa6.84□□□□□ -1.31
AP1S3-202ENST00000396653 Q1T7F1 81 aa6.84□□□□□ -1.31
AP1S3-202ENST00000396653 UQCR11O14957 56 aa6.78□□□□□ -1.32
AP1S3-202ENST00000396653 MACF1Q9UPN3 7388 aaKnown RBP6.76□□□□□ -1.33
AP1S3-202ENST00000396653 KRTAP12-1P59990 96 aa6.75□□□□□ -1.33
AP1S3-202ENST00000396653 CAMK2N1Q7Z7J9 78 aa6.74□□□□□ -1.33
AP1S3-202ENST00000396653 A8MU10 97 aa6.73□□□□□ -1.33
AP1S3-202ENST00000396653 SPINT4Q6UDR6 99 aa6.73□□□□□ -1.33
AP1S3-202ENST00000396653 PSPHP1O15172 72 aa6.71□□□□□ -1.34
AP1S3-202ENST00000396653 KRTAP12-2P59991 146 aa6.69□□□□□ -1.34
AP1S3-202ENST00000396653 KRTAP9-7A8MTY7 169 aa6.67□□□□□ -1.34
AP1S3-202ENST00000396653 MIR22HGQ0VDD5 57 aa6.64□□□□□ -1.35
AP1S3-202ENST00000396653 SYNE2Q8WXH0 6885 aaKnown RBP6.62□□□□□ -1.35
AP1S3-202ENST00000396653 KRTAP6-3Q3LI67 103 aa6.58□□□□□ -1.36
AP1S3-202ENST00000396653 KRTAP10-7P60409 375 aaPredicted RBP6.56□□□□□ -1.36
AP1S3-202ENST00000396653 KRTAP10-12P60413 245 aa6.56□□□□□ -1.36
AP1S3-202ENST00000396653 A6NED7 52 aa6.54□□□□□ -1.36
AP1S3-202ENST00000396653 K7ERS5 55 aa6.46□□□□□ -1.38
AP1S3-202ENST00000396653 KRTAP5-9P26371 169 aa6.46□□□□□ -1.38
AP1S3-202ENST00000396653 KRTAP8-1Q8IUC2 63 aa6.44□□□□□ -1.38
AP1S3-202ENST00000396653 KMT2DO14686 5537 aa6.42□□□□□ -1.38
AP1S3-202ENST00000396653 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
AP1S3-202ENST00000396653 KRTAP4-8Q9BYQ9 185 aa6.42□□□□□ -1.38
AP1S3-202ENST00000396653 C10orf95Q9H7T3 257 aa6.41□□□□□ -1.38
AP1S3-202ENST00000396653 CDC42SE1Q9NRR8 79 aa6.36□□□□□ -1.39
AP1S3-202ENST00000396653 TNP1P09430 55 aa6.34□□□□□ -1.39
AP1S3-202ENST00000396653 SPRR2FQ96RM1 72 aa6.32□□□□□ -1.4
AP1S3-202ENST00000396653 MUC12Q9UKN1 5478 aa6.24□□□□□ -1.41
AP1S3-202ENST00000396653 NEBP20929 6669 aa6.22□□□□□ -1.41
AP1S3-202ENST00000396653 KRTAP25-1Q3LHN0 102 aa6.2□□□□□ -1.42
AP1S3-202ENST00000396653 KRTAP19-7Q3SYF9 63 aa6.15□□□□□ -1.42
AP1S3-202ENST00000396653 LCE3AQ5TA76 89 aa6.15□□□□□ -1.42
AP1S3-202ENST00000396653 SPRR2EP22531 72 aa6.14□□□□□ -1.43
AP1S3-202ENST00000396653 SPRR2BP35325 72 aa6.14□□□□□ -1.43
AP1S3-202ENST00000396653 SPRR2AP35326 72 aa6.14□□□□□ -1.43
AP1S3-202ENST00000396653 LCE1AQ5T7P2 110 aa6.12□□□□□ -1.43
AP1S3-202ENST00000396653 MDN1Q9NU22 5596 aa6.11□□□□□ -1.43
AP1S3-202ENST00000396653 ROMO1P60602 79 aa6.09□□□□□ -1.43
AP1S3-202ENST00000396653 MT1EP04732 61 aa6.08□□□□□ -1.44
AP1S3-202ENST00000396653 KRTAP19-5Q3LI72 72 aa6.08□□□□□ -1.44
AP1S3-202ENST00000396653 BRK1Q8WUW1 75 aa6.06□□□□□ -1.44
AP1S3-202ENST00000396653 KRTAP23-1A1A580 65 aa6.02□□□□□ -1.45
AP1S3-202ENST00000396653 KRTAP19-3Q7Z4W3 81 aa5.96□□□□□ -1.46
AP1S3-202ENST00000396653 SPRR2DP22532 72 aa5.93□□□□□ -1.46
AP1S3-202ENST00000396653 KRTAP12-3P60328 96 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms