RNA–Protein interactions for RNA: ENST00000396634.5

HLA-A-204, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-204ENST00000396634 MRPL34Q9BQ48 92 aaKnown RBP9.32□□□□□ -0.92
HLA-A-204ENST00000396634 MUC2Q02817 5179 aa9.31□□□□□ -0.92
HLA-A-204ENST00000396634 A0A1B0GVX0 72 aa9.3□□□□□ -0.92
HLA-A-204ENST00000396634 LINC01554Q52M75 96 aa9.3□□□□□ -0.92
HLA-A-204ENST00000396634 MUC17Q685J3 4493 aa9.25□□□□□ -0.93
HLA-A-204ENST00000396634 SPATA8Q6RVD6 105 aa9.25□□□□□ -0.93
HLA-A-204ENST00000396634 KRTAP16-1A8MUX0 517 aa9.23□□□□□ -0.93
HLA-A-204ENST00000396634 RPL37P61927 97 aaKnown RBP9.22□□□□□ -0.93
HLA-A-204ENST00000396634 KRTAP4-1Q9BYQ7 146 aa9.21□□□□□ -0.94
HLA-A-204ENST00000396634 A0A1B0GU69 56 aa9.19□□□□□ -0.94
HLA-A-204ENST00000396634 SEC61BP60468 96 aaKnown RBP9.19□□□□□ -0.94
HLA-A-204ENST00000396634 DMAC1Q96GE9 116 aa9.19□□□□□ -0.94
HLA-A-204ENST00000396634 C20orf166-AS1Q96NR2 134 aa9.17□□□□□ -0.94
HLA-A-204ENST00000396634 A8MUU9 505 aa9.15□□□□□ -0.94
HLA-A-204ENST00000396634 UQCR11O14957 56 aa9.15□□□□□ -0.94
HLA-A-204ENST00000396634 PRAC1Q96KF2 57 aa9.15□□□□□ -0.95
HLA-A-204ENST00000396634 MIR22HGQ0VDD5 57 aa9.12□□□□□ -0.95
HLA-A-204ENST00000396634 H3BS24 57 aa9.04□□□□□ -0.96
HLA-A-204ENST00000396634 ADM2Q7Z4H4 148 aa9.03□□□□□ -0.96
HLA-A-204ENST00000396634 Q5W150 140 aa9.02□□□□□ -0.97
HLA-A-204ENST00000396634 FAT4Q6V0I7 4981 aa8.95□□□□□ -0.98
HLA-A-204ENST00000396634 IGKV2-30P06310 120 aa8.95□□□□□ -0.98
HLA-A-204ENST00000396634 CSAG1Q6PB30 78 aa8.92□□□□□ -0.98
HLA-A-204ENST00000396634 KRTAP19-2Q3LHN2 52 aa8.87□□□□□ -0.99
HLA-A-204ENST00000396634 LCE2CQ5TA81 110 aa8.82□□□□□ -1
HLA-A-204ENST00000396634 IGKV2D-30A0A075B6S6 120 aa8.79□□□□□ -1
HLA-A-204ENST00000396634 COX6B2Q6YFQ2 88 aa8.77□□□□□ -1.01
HLA-A-204ENST00000396634 KRTAP25-1Q3LHN0 102 aa8.74□□□□□ -1.01
HLA-A-204ENST00000396634 LCE2AQ5TA79 106 aaPredicted RBP8.69□□□□□ -1.02
HLA-A-204ENST00000396634 ROMO1P60602 79 aa8.68□□□□□ -1.02
HLA-A-204ENST00000396634 MT1HP80294 61 aa8.68□□□□□ -1.02
HLA-A-204ENST00000396634 FLGP20930 4061 aaPredicted RBP8.67□□□□□ -1.02
HLA-A-204ENST00000396634 K7ERS5 55 aa8.58□□□□□ -1.04
HLA-A-204ENST00000396634 H0YAA0 97 aa8.55□□□□□ -1.04
HLA-A-204ENST00000396634 M0R2T5 61 aa8.55□□□□□ -1.04
HLA-A-204ENST00000396634 A0A1B0GU33 70 aa8.53□□□□□ -1.04
HLA-A-204ENST00000396634 H1FX-AS1Q4G0G2 97 aa8.49□□□□□ -1.05
HLA-A-204ENST00000396634 KRTAP3-1Q9BYR8 98 aa8.47□□□□□ -1.05
HLA-A-204ENST00000396634 KRTAP10-6P60371 365 aaPredicted RBP8.43□□□□□ -1.06
HLA-A-204ENST00000396634 LORP23490 312 aaPredicted RBP8.39□□□□□ -1.07
HLA-A-204ENST00000396634 P0C880 135 aa8.3□□□□□ -1.08
HLA-A-204ENST00000396634 S4R3F8 94 aa8.28□□□□□ -1.08
HLA-A-204ENST00000396634 KRTAP9-8Q9BYQ0 159 aa8.27□□□□□ -1.09
HLA-A-204ENST00000396634 MT2AP02795 61 aa8.21□□□□□ -1.1
HLA-A-204ENST00000396634 KRTAP3-3Q9BYR6 98 aa8.19□□□□□ -1.1
HLA-A-204ENST00000396634 SPINT4Q6UDR6 99 aa8.19□□□□□ -1.1
HLA-A-204ENST00000396634 MT1FP04733 61 aa8.17□□□□□ -1.1
HLA-A-204ENST00000396634 KRTAP10-10P60014 251 aa8.11□□□□□ -1.11
HLA-A-204ENST00000396634 KRTAP9-2Q9BYQ4 174 aa8.11□□□□□ -1.11
HLA-A-204ENST00000396634 CRIPTQ9P021 101 aa8.11□□□□□ -1.11
HLA-A-204ENST00000396634 KRTAP15-1Q3LI76 137 aa8.06□□□□□ -1.12
HLA-A-204ENST00000396634 LCE2DQ5TA82 110 aaPredicted RBP8.02□□□□□ -1.13
HLA-A-204ENST00000396634 KRTAP9-3Q9BYQ3 159 aa7.98□□□□□ -1.13
HLA-A-204ENST00000396634 NDUFAF8A1L188 74 aa7.97□□□□□ -1.13
HLA-A-204ENST00000396634 FSIP2Q5CZC0 6907 aa7.93□□□□□ -1.14
HLA-A-204ENST00000396634 LCE2BO14633 110 aa7.89□□□□□ -1.15
HLA-A-204ENST00000396634 A0A0D9SG42 100 aa7.85□□□□□ -1.15
HLA-A-204ENST00000396634 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
HLA-A-204ENST00000396634 KRTAP3-2Q9BYR7 98 aa7.85□□□□□ -1.15
HLA-A-204ENST00000396634 USH2AO75445 5202 aa7.85□□□□□ -1.15
HLA-A-204ENST00000396634 C10orf95Q9H7T3 257 aa7.81□□□□□ -1.16
HLA-A-204ENST00000396634 KRTAP19-1Q8IUB9 90 aa7.8□□□□□ -1.16
HLA-A-204ENST00000396634 SSPOA2VEC9 5147 aa7.72□□□□□ -1.17
HLA-A-204ENST00000396634 CRCT1Q9UGL9 99 aa7.7□□□□□ -1.18
HLA-A-204ENST00000396634 M0QZ58 72 aa7.7□□□□□ -1.18
HLA-A-204ENST00000396634 KRTAP12-2P59991 146 aa7.7□□□□□ -1.18
HLA-A-204ENST00000396634 SPRR2GQ9BYE4 73 aa7.7□□□□□ -1.18
HLA-A-204ENST00000396634 KRTAP12-1P59990 96 aa7.68□□□□□ -1.18
HLA-A-204ENST00000396634 KRTAP9-6A0A140TA67 174 aa7.66□□□□□ -1.18
HLA-A-204ENST00000396634 A0A0A0MQY5 61 aa7.64□□□□□ -1.19
HLA-A-204ENST00000396634 MT1BP07438 61 aa7.6□□□□□ -1.19
HLA-A-204ENST00000396634 R4GN34 69 aa7.6□□□□□ -1.19
HLA-A-204ENST00000396634 KRTAP19-8Q3LI54 63 aa7.58□□□□□ -1.2
HLA-A-204ENST00000396634 LUZP6Q538Z0 58 aa7.54□□□□□ -1.2
HLA-A-204ENST00000396634 PLAC4Q8WY50 150 aa7.49□□□□□ -1.21
HLA-A-204ENST00000396634 FCGBPQ9Y6R7 5405 aaPredicted RBP7.46□□□□□ -1.22
HLA-A-204ENST00000396634 KRTAP19-6Q3LI70 58 aa7.45□□□□□ -1.22
HLA-A-204ENST00000396634 PP632Q6XCG6 107 aa7.38□□□□□ -1.23
HLA-A-204ENST00000396634 KRTAP10-5P60370 271 aa7.28□□□□□ -1.24
HLA-A-204ENST00000396634 MT1XP80297 61 aa7.23□□□□□ -1.25
HLA-A-204ENST00000396634 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.17□□□□□ -1.26
HLA-A-204ENST00000396634 MACF1Q9UPN3 7388 aaKnown RBP7.11□□□□□ -1.27
HLA-A-204ENST00000396634 PRO2289Q9P1D8 64 aa7.1□□□□□ -1.27
HLA-A-204ENST00000396634 KRTAP23-1A1A580 65 aa7.07□□□□□ -1.28
HLA-A-204ENST00000396634 CAMK2N1Q7Z7J9 78 aa7.06□□□□□ -1.28
HLA-A-204ENST00000396634 KMT2DO14686 5537 aa6.98□□□□□ -1.29
HLA-A-204ENST00000396634 SYNE2Q8WXH0 6885 aaKnown RBP6.98□□□□□ -1.29
HLA-A-204ENST00000396634 SPRR5A0A1B0GTR4 108 aa6.96□□□□□ -1.3
HLA-A-204ENST00000396634 KRTAP9-7A8MTY7 169 aa6.95□□□□□ -1.3
HLA-A-204ENST00000396634 KRTAP10-7P60409 375 aaPredicted RBP6.95□□□□□ -1.3
HLA-A-204ENST00000396634 KRTAP4-8A0A0G2JLE6 195 aa6.85□□□□□ -1.31
HLA-A-204ENST00000396634 KRTAP4-8Q9BYQ9 185 aa6.85□□□□□ -1.31
HLA-A-204ENST00000396634 TNP1P09430 55 aa6.83□□□□□ -1.32
HLA-A-204ENST00000396634 KRTAP10-12P60413 245 aa6.81□□□□□ -1.32
HLA-A-204ENST00000396634 KRTAP6-3Q3LI67 103 aa6.77□□□□□ -1.33
HLA-A-204ENST00000396634 KRTAP8-1Q8IUC2 63 aa6.73□□□□□ -1.33
HLA-A-204ENST00000396634 INE1O15225 51 aa6.7□□□□□ -1.34
HLA-A-204ENST00000396634 MUC12Q9UKN1 5478 aa6.67□□□□□ -1.34
HLA-A-204ENST00000396634 KRTAP5-9P26371 169 aa6.66□□□□□ -1.34
HLA-A-204ENST00000396634 SPRR2FQ96RM1 72 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms