RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 C5orf47Q569G3 176 aa7.68□□□□□ -1.18
CLTA-203ENST00000396603 C1orf64Q8NEQ6 169 aa7.66□□□□□ -1.18
CLTA-203ENST00000396603 H3BPC8 53 aa7.65□□□□□ -1.18
CLTA-203ENST00000396603 SMIM20Q8N5G0 67 aa7.64□□□□□ -1.19
CLTA-203ENST00000396603 LINC00208Q96KT6 92 aa7.64□□□□□ -1.19
CLTA-203ENST00000396603 FAM236AA0A1B0GUQ0 79 aa7.59□□□□□ -1.19
CLTA-203ENST00000396603 FAM236BA0A1B0GV22 79 aa7.59□□□□□ -1.19
CLTA-203ENST00000396603 S4R3F8 94 aa7.56□□□□□ -1.2
CLTA-203ENST00000396603 KRTAP3-1Q9BYR8 98 aa7.55□□□□□ -1.2
CLTA-203ENST00000396603 TRAV7A0A075B6U4 112 aa7.54□□□□□ -1.2
CLTA-203ENST00000396603 A8MUN3 132 aa7.53□□□□□ -1.2
CLTA-203ENST00000396603 CSAG1Q6PB30 78 aa7.49□□□□□ -1.21
CLTA-203ENST00000396603 KLKP1Q107X0 134 aa7.48□□□□□ -1.21
CLTA-203ENST00000396603 NEBP20929 6669 aa7.46□□□□□ -1.21
CLTA-203ENST00000396603 LCA10Q71F78 164 aa7.46□□□□□ -1.22
CLTA-203ENST00000396603 A6NN06 94 aa7.41□□□□□ -1.22
CLTA-203ENST00000396603 NDUFC1O43677 76 aa7.4□□□□□ -1.22
CLTA-203ENST00000396603 SERP2Q8N6R1 65 aa7.4□□□□□ -1.22
CLTA-203ENST00000396603 Q5VV11 94 aa7.38□□□□□ -1.23
CLTA-203ENST00000396603 MUC12Q9UKN1 5478 aa7.37□□□□□ -1.23
CLTA-203ENST00000396603 SPRR2GQ9BYE4 73 aa7.37□□□□□ -1.23
CLTA-203ENST00000396603 MT1BP07438 61 aa7.36□□□□□ -1.23
CLTA-203ENST00000396603 KRTAP19-8Q3LI54 63 aa7.36□□□□□ -1.23
CLTA-203ENST00000396603 DMAC1Q96GE9 116 aa7.35□□□□□ -1.23
CLTA-203ENST00000396603 C20orf197Q8N268 126 aa7.31□□□□□ -1.24
CLTA-203ENST00000396603 SNURFQ9Y675 71 aa7.3□□□□□ -1.24
CLTA-203ENST00000396603 KRTAP10-5P60370 271 aa7.29□□□□□ -1.24
CLTA-203ENST00000396603 ACYP2P14621 99 aa7.28□□□□□ -1.24
CLTA-203ENST00000396603 COX7CP15954 63 aa7.24□□□□□ -1.25
CLTA-203ENST00000396603 KRTAP5-9P26371 169 aa7.24□□□□□ -1.25
CLTA-203ENST00000396603 SPANXA2-OT1Q8N9U9 137 aa7.24□□□□□ -1.25
CLTA-203ENST00000396603 H0YAA0 97 aa7.23□□□□□ -1.25
CLTA-203ENST00000396603 H3BS24 57 aa7.22□□□□□ -1.25
CLTA-203ENST00000396603 SPTSSBQ8NFR3 76 aa7.21□□□□□ -1.26
CLTA-203ENST00000396603 CRIPTQ9P021 101 aa7.21□□□□□ -1.26
CLTA-203ENST00000396603 KRTAP20-1Q3LI63 56 aa7.2□□□□□ -1.26
CLTA-203ENST00000396603 CHKB-CPT1BH3BT56 60 aa7.17□□□□□ -1.26
CLTA-203ENST00000396603 ANAPC13Q9BS18 74 aa7.17□□□□□ -1.26
CLTA-203ENST00000396603 MDN1Q9NU22 5596 aa7.15□□□□□ -1.26
CLTA-203ENST00000396603 KMT2DO14686 5537 aa7.15□□□□□ -1.26
CLTA-203ENST00000396603 ADM2Q7Z4H4 148 aa7.12□□□□□ -1.27
CLTA-203ENST00000396603 LOC100996750A0A140TA64 210 aa7.11□□□□□ -1.27
CLTA-203ENST00000396603 KRTAP4-6Q9BYQ5 205 aa7.11□□□□□ -1.27
CLTA-203ENST00000396603 H7BZZ5 65 aa7.04□□□□□ -1.28
CLTA-203ENST00000396603 COA5Q86WW8 74 aa6.98□□□□□ -1.29
CLTA-203ENST00000396603 KRTAP2-3P0C7H8 128 aa6.97□□□□□ -1.29
CLTA-203ENST00000396603 KRTAP2-4Q9BYR9 128 aa6.97□□□□□ -1.29
CLTA-203ENST00000396603 R4GN34 69 aa6.97□□□□□ -1.29
CLTA-203ENST00000396603 CYSTM1Q9H1C7 97 aa6.96□□□□□ -1.3
CLTA-203ENST00000396603 PRO2289Q9P1D8 64 aa6.96□□□□□ -1.3
CLTA-203ENST00000396603 P0C880 135 aa6.95□□□□□ -1.3
CLTA-203ENST00000396603 CCDC179H3BU77 68 aa6.93□□□□□ -1.3
CLTA-203ENST00000396603 M0QZ58 72 aa6.9□□□□□ -1.3
CLTA-203ENST00000396603 ATP5EP56381 51 aaPredicted RBP6.9□□□□□ -1.3
CLTA-203ENST00000396603 SPRR2FQ96RM1 72 aa6.89□□□□□ -1.31
CLTA-203ENST00000396603 SEC61GP60059 68 aa6.86□□□□□ -1.31
CLTA-203ENST00000396603 SPRR2EP22531 72 aa6.85□□□□□ -1.31
CLTA-203ENST00000396603 SPRR2BP35325 72 aa6.85□□□□□ -1.31
CLTA-203ENST00000396603 SPRR2AP35326 72 aa6.85□□□□□ -1.31
CLTA-203ENST00000396603 MT1XP80297 61 aa6.84□□□□□ -1.31
CLTA-203ENST00000396603 KRTAP12-2P59991 146 aa6.82□□□□□ -1.32
CLTA-203ENST00000396603 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
CLTA-203ENST00000396603 SERP1Q9Y6X1 66 aa6.82□□□□□ -1.32
CLTA-203ENST00000396603 KRTAP8-1Q8IUC2 63 aa6.8□□□□□ -1.32
CLTA-203ENST00000396603 TMEM258P61165 79 aa6.79□□□□□ -1.32
CLTA-203ENST00000396603 LINC01554Q52M75 96 aa6.77□□□□□ -1.33
CLTA-203ENST00000396603 LCE1AQ5T7P2 110 aa6.74□□□□□ -1.33
CLTA-203ENST00000396603 KRTAP2-2Q9BYT5 123 aa6.74□□□□□ -1.33
CLTA-203ENST00000396603 KRTAP2-1Q9BYU5 128 aa6.74□□□□□ -1.33
CLTA-203ENST00000396603 A0A1B0GU69 56 aa6.67□□□□□ -1.34
CLTA-203ENST00000396603 KRTAP4-8Q9BYQ9 185 aa6.66□□□□□ -1.34
CLTA-203ENST00000396603 A0A1B0GU33 70 aa6.63□□□□□ -1.35
CLTA-203ENST00000396603 SPRR2DP22532 72 aa6.63□□□□□ -1.35
CLTA-203ENST00000396603 KRTAP19-4Q3LI73 84 aa6.63□□□□□ -1.35
CLTA-203ENST00000396603 PRR15LQ9BU68 103 aa6.62□□□□□ -1.35
CLTA-203ENST00000396603 KRTAP4-8A0A0G2JLE6 195 aa6.58□□□□□ -1.36
CLTA-203ENST00000396603 KRTAP13-4Q3LI77 160 aa6.58□□□□□ -1.36
CLTA-203ENST00000396603 KRTAP10-12P60413 245 aa6.54□□□□□ -1.36
CLTA-203ENST00000396603 KRTAP4-12Q9BQ66 201 aa6.52□□□□□ -1.37
CLTA-203ENST00000396603 LINC01558Q9Y6Z2 57 aa6.52□□□□□ -1.37
CLTA-203ENST00000396603 SMIM26A0A096LP01 95 aa6.5□□□□□ -1.37
CLTA-203ENST00000396603 SPATA8Q6RVD6 105 aa6.5□□□□□ -1.37
CLTA-203ENST00000396603 KRTAP10-7P60409 375 aaPredicted RBP6.49□□□□□ -1.37
CLTA-203ENST00000396603 A0A0D9SG42 100 aa6.48□□□□□ -1.37
CLTA-203ENST00000396603 LCE3BQ5TA77 95 aa6.48□□□□□ -1.37
CLTA-203ENST00000396603 CAMK2N1Q7Z7J9 78 aa6.48□□□□□ -1.37
CLTA-203ENST00000396603 PCP4P48539 62 aa6.45□□□□□ -1.38
CLTA-203ENST00000396603 V9GYY9 64 aa6.43□□□□□ -1.38
CLTA-203ENST00000396603 SPINT4Q6UDR6 99 aa6.4□□□□□ -1.38
CLTA-203ENST00000396603 UQCR11O14957 56 aa6.36□□□□□ -1.39
CLTA-203ENST00000396603 KRTAP12-1P59990 96 aa6.35□□□□□ -1.39
CLTA-203ENST00000396603 Q1T7F1 81 aa6.31□□□□□ -1.4
CLTA-203ENST00000396603 A8MU10 97 aa6.3□□□□□ -1.4
CLTA-203ENST00000396603 RPS28P62857 69 aaKnown RBP6.27□□□□□ -1.41
CLTA-203ENST00000396603 DSTQ03001 7570 aaKnown RBP6.24□□□□□ -1.41
CLTA-203ENST00000396603 GPR98Q8WXG9 6306 aa6.24□□□□□ -1.41
CLTA-203ENST00000396603 PSPHP1O15172 72 aa6.22□□□□□ -1.41
CLTA-203ENST00000396603 MIR22HGQ0VDD5 57 aa6.22□□□□□ -1.41
CLTA-203ENST00000396603 LCE5AQ5TCM9 118 aa6.18□□□□□ -1.42
CLTA-203ENST00000396603 KRTAP9-9Q9BYP9 154 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms