RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 A8MU10 97 aa1.75□□□□□ -2.13
VPS13C-203ENST00000395896 LUZP6Q538Z0 58 aa1.74□□□□□ -2.13
VPS13C-203ENST00000395896 MYCBP2O75592 4640 aa1.73□□□□□ -2.13
VPS13C-203ENST00000395896 PLAC4Q8WY50 150 aa1.73□□□□□ -2.13
VPS13C-203ENST00000395896 A6NN06 94 aa1.73□□□□□ -2.13
VPS13C-203ENST00000395896 PP632Q6XCG6 107 aa1.73□□□□□ -2.13
VPS13C-203ENST00000395896 PKD1P98161 4303 aa1.73□□□□□ -2.13
VPS13C-203ENST00000395896 FAT1Q14517 4588 aa1.73□□□□□ -2.13
VPS13C-203ENST00000395896 MT1HL1P0DM35 61 aa1.72□□□□□ -2.13
VPS13C-203ENST00000395896 KMT2CQ8NEZ4 4911 aaKnown RBP1.72□□□□□ -2.13
VPS13C-203ENST00000395896 FAT3Q8TDW7 4589 aa1.71□□□□□ -2.14
VPS13C-203ENST00000395896 APOBP04114 4563 aaKnown RBP1.71□□□□□ -2.14
VPS13C-203ENST00000395896 TNP1P09430 55 aa1.71□□□□□ -2.14
VPS13C-203ENST00000395896 DYNC1H1Q14204 4646 aaKnown RBP1.7□□□□□ -2.14
VPS13C-203ENST00000395896 RYR3Q15413 4870 aa1.7□□□□□ -2.14
VPS13C-203ENST00000395896 PRO2289Q9P1D8 64 aa1.68□□□□□ -2.14
VPS13C-203ENST00000395896 KIAA1109Q2LD37 5005 aa1.68□□□□□ -2.14
VPS13C-203ENST00000395896 KRTAP25-1Q3LHN0 102 aa1.67□□□□□ -2.14
VPS13C-203ENST00000395896 PKHD1L1Q86WI1 4243 aa1.67□□□□□ -2.14
VPS13C-203ENST00000395896 SACSQ9NZJ4 4579 aa1.67□□□□□ -2.14
VPS13C-203ENST00000395896 PRAC1Q96KF2 57 aa1.66□□□□□ -2.14
VPS13C-203ENST00000395896 KRTAP3-1Q9BYR8 98 aa1.66□□□□□ -2.14
VPS13C-203ENST00000395896 LRP1Q07954 4544 aaKnown RBP1.66□□□□□ -2.14
VPS13C-203ENST00000395896 HSPG2P98160 4391 aa1.65□□□□□ -2.15
VPS13C-203ENST00000395896 P0C880 135 aa1.64□□□□□ -2.15
VPS13C-203ENST00000395896 HYDINQ4G0P3 5121 aa1.63□□□□□ -2.15
VPS13C-203ENST00000395896 HERC2O95714 4834 aa1.63□□□□□ -2.15
VPS13C-203ENST00000395896 FLGP20930 4061 aaPredicted RBP1.63□□□□□ -2.15
VPS13C-203ENST00000395896 LRP2P98164 4655 aa1.62□□□□□ -2.15
VPS13C-203ENST00000395896 KRTAP10-6P60371 365 aaPredicted RBP1.62□□□□□ -2.15
VPS13C-203ENST00000395896 TNXBP22105 4242 aa1.62□□□□□ -2.15
VPS13C-203ENST00000395896 KRTAP10-10P60014 251 aa1.61□□□□□ -2.15
VPS13C-203ENST00000395896 RYR2Q92736 4967 aa1.6□□□□□ -2.15
VPS13C-203ENST00000395896 KRTAP3-3Q9BYR6 98 aa1.59□□□□□ -2.15
VPS13C-203ENST00000395896 KRTAP13-4Q3LI77 160 aa1.59□□□□□ -2.16
VPS13C-203ENST00000395896 KRTAP12-1P59990 96 aa1.59□□□□□ -2.16
VPS13C-203ENST00000395896 A0A0A0MQY5 61 aa1.59□□□□□ -2.16
VPS13C-203ENST00000395896 KRTAP23-1A1A580 65 aa1.58□□□□□ -2.16
VPS13C-203ENST00000395896 KRTAP4-5Q9BYR2 181 aa1.56□□□□□ -2.16
VPS13C-203ENST00000395896 KRTAP3-2Q9BYR7 98 aa1.56□□□□□ -2.16
VPS13C-203ENST00000395896 LPAP08519 4548 aa1.56□□□□□ -2.16
VPS13C-203ENST00000395896 H3BS24 57 aa1.56□□□□□ -2.16
VPS13C-203ENST00000395896 PCLOQ9Y6V0 5065 aa1.55□□□□□ -2.16
VPS13C-203ENST00000395896 KRTAP12-2P59991 146 aa1.55□□□□□ -2.16
VPS13C-203ENST00000395896 C10orf95Q9H7T3 257 aa1.52□□□□□ -2.17
VPS13C-203ENST00000395896 SPRR2GQ9BYE4 73 aa1.5□□□□□ -2.17
VPS13C-203ENST00000395896 MUC2Q02817 5179 aa1.5□□□□□ -2.17
VPS13C-203ENST00000395896 KRTAP19-4Q3LI73 84 aa1.5□□□□□ -2.17
VPS13C-203ENST00000395896 NDUFAF8A1L188 74 aa1.47□□□□□ -2.17
VPS13C-203ENST00000395896 BIRC6Q9NR09 4857 aa1.47□□□□□ -2.17
VPS13C-203ENST00000395896 HERC1Q15751 4861 aa1.47□□□□□ -2.17
VPS13C-203ENST00000395896 EPPK1P58107 5090 aaKnown RBP1.47□□□□□ -2.17
VPS13C-203ENST00000395896 MUC17Q685J3 4493 aa1.45□□□□□ -2.18
VPS13C-203ENST00000395896 FSIP2Q5CZC0 6907 aa1.45□□□□□ -2.18
VPS13C-203ENST00000395896 KRTAP10-12P60413 245 aa1.45□□□□□ -2.18
VPS13C-203ENST00000395896 ABCA13Q86UQ4 5058 aa1.45□□□□□ -2.18
VPS13C-203ENST00000395896 RNF213Q63HN8 5207 aa1.45□□□□□ -2.18
VPS13C-203ENST00000395896 MT1HP80294 61 aa1.45□□□□□ -2.18
VPS13C-203ENST00000395896 KRTAP4-1Q9BYQ7 146 aa1.44□□□□□ -2.18
VPS13C-203ENST00000395896 KRTAP15-1Q3LI76 137 aa1.42□□□□□ -2.18
VPS13C-203ENST00000395896 UBR4Q5T4S7 5183 aa1.41□□□□□ -2.18
VPS13C-203ENST00000395896 MT2AP02795 61 aa1.41□□□□□ -2.18
VPS13C-203ENST00000395896 KRTAP19-8Q3LI54 63 aa1.41□□□□□ -2.18
VPS13C-203ENST00000395896 KRTAP12-3P60328 96 aa1.4□□□□□ -2.18
VPS13C-203ENST00000395896 KRTAP17-1Q9BYP8 105 aa1.4□□□□□ -2.19
VPS13C-203ENST00000395896 KRTAP19-1Q8IUB9 90 aa1.4□□□□□ -2.19
VPS13C-203ENST00000395896 KRTAP8-1Q8IUC2 63 aa1.39□□□□□ -2.19
VPS13C-203ENST00000395896 LORP23490 312 aaPredicted RBP1.38□□□□□ -2.19
VPS13C-203ENST00000395896 FAT4Q6V0I7 4981 aa1.37□□□□□ -2.19
VPS13C-203ENST00000395896 KRTAP9-8Q9BYQ0 159 aa1.37□□□□□ -2.19
VPS13C-203ENST00000395896 MT1FP04733 61 aa1.37□□□□□ -2.19
VPS13C-203ENST00000395896 LCE2CQ5TA81 110 aa1.37□□□□□ -2.19
VPS13C-203ENST00000395896 KRTAP19-2Q3LHN2 52 aa1.36□□□□□ -2.19
VPS13C-203ENST00000395896 SYNE1Q8NF91 8797 aaKnown RBP1.36□□□□□ -2.19
VPS13C-203ENST00000395896 DSTQ03001 7570 aaKnown RBP1.35□□□□□ -2.19
VPS13C-203ENST00000395896 HMCN2Q8NDA2 5059 aa1.35□□□□□ -2.19
VPS13C-203ENST00000395896 INE1O15225 51 aa1.34□□□□□ -2.19
VPS13C-203ENST00000395896 LCE3AQ5TA76 89 aa1.33□□□□□ -2.2
VPS13C-203ENST00000395896 KRTAP10-5P60370 271 aa1.31□□□□□ -2.2
VPS13C-203ENST00000395896 KRTAP9-3Q9BYQ3 159 aa1.31□□□□□ -2.2
VPS13C-203ENST00000395896 LCE2AQ5TA79 106 aaPredicted RBP1.3□□□□□ -2.2
VPS13C-203ENST00000395896 MT3P25713 68 aa1.3□□□□□ -2.2
VPS13C-203ENST00000395896 MT1XP80297 61 aa1.29□□□□□ -2.2
VPS13C-203ENST00000395896 MT1BP07438 61 aa1.29□□□□□ -2.2
VPS13C-203ENST00000395896 LCE3CQ5T5A8 94 aa1.25□□□□□ -2.21
VPS13C-203ENST00000395896 OBSCNQ5VST9 7968 aa1.25□□□□□ -2.21
VPS13C-203ENST00000395896 SPRR5A0A1B0GTR4 108 aa1.25□□□□□ -2.21
VPS13C-203ENST00000395896 KRTAP19-6Q3LI70 58 aa1.25□□□□□ -2.21
VPS13C-203ENST00000395896 MACF1Q9UPN3 7388 aaKnown RBP1.25□□□□□ -2.21
VPS13C-203ENST00000395896 MT1GP13640 62 aa1.24□□□□□ -2.21
VPS13C-203ENST00000395896 LCE2BO14633 110 aa1.23□□□□□ -2.21
VPS13C-203ENST00000395896 SYNE2Q8WXH0 6885 aaKnown RBP1.23□□□□□ -2.21
VPS13C-203ENST00000395896 KRTAP19-5Q3LI72 72 aa1.23□□□□□ -2.21
VPS13C-203ENST00000395896 LCE2DQ5TA82 110 aaPredicted RBP1.23□□□□□ -2.21
VPS13C-203ENST00000395896 KRTAP10-7P60409 375 aaPredicted RBP1.23□□□□□ -2.21
VPS13C-203ENST00000395896 USH2AO75445 5202 aa1.22□□□□□ -2.21
VPS13C-203ENST00000395896 SPRR2FQ96RM1 72 aa1.22□□□□□ -2.21
VPS13C-203ENST00000395896 MT1LQ93083 61 aa1.2□□□□□ -2.22
VPS13C-203ENST00000395896 FCGBPQ9Y6R7 5405 aaPredicted RBP1.18□□□□□ -2.22
VPS13C-203ENST00000395896 MDN1Q9NU22 5596 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms