RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 MUC17Q685J3 4493 aa7.57□□□□□ -1.2
RTFDC1-203ENST00000395881 LCE2AQ5TA79 106 aaPredicted RBP7.57□□□□□ -1.2
RTFDC1-203ENST00000395881 Q5VV11 94 aa7.55□□□□□ -1.2
RTFDC1-203ENST00000395881 PRR15LQ9BU68 103 aa7.55□□□□□ -1.2
RTFDC1-203ENST00000395881 MUC2Q02817 5179 aa7.54□□□□□ -1.2
RTFDC1-203ENST00000395881 COX6B2Q6YFQ2 88 aa7.52□□□□□ -1.21
RTFDC1-203ENST00000395881 KRTAP3-1Q9BYR8 98 aa7.5□□□□□ -1.21
RTFDC1-203ENST00000395881 SPTSSBQ8NFR3 76 aa7.5□□□□□ -1.21
RTFDC1-203ENST00000395881 PRO0628Q9UI54 55 aa7.47□□□□□ -1.21
RTFDC1-203ENST00000395881 BRK1Q8WUW1 75 aa7.46□□□□□ -1.22
RTFDC1-203ENST00000395881 A0A1B0GU69 56 aa7.42□□□□□ -1.22
RTFDC1-203ENST00000395881 SVIPQ8NHG7 77 aa7.41□□□□□ -1.22
RTFDC1-203ENST00000395881 LORP23490 312 aaPredicted RBP7.39□□□□□ -1.23
RTFDC1-203ENST00000395881 A6NED7 52 aa7.37□□□□□ -1.23
RTFDC1-203ENST00000395881 FAT4Q6V0I7 4981 aa7.37□□□□□ -1.23
RTFDC1-203ENST00000395881 SEC61BP60468 96 aaKnown RBP7.37□□□□□ -1.23
RTFDC1-203ENST00000395881 KRTAP4-1Q9BYQ7 146 aa7.35□□□□□ -1.23
RTFDC1-203ENST00000395881 SEC61GP60059 68 aa7.33□□□□□ -1.24
RTFDC1-203ENST00000395881 CDC42SE1Q9NRR8 79 aa7.33□□□□□ -1.24
RTFDC1-203ENST00000395881 LCA10Q71F78 164 aa7.29□□□□□ -1.24
RTFDC1-203ENST00000395881 H1FX-AS1Q4G0G2 97 aa7.27□□□□□ -1.25
RTFDC1-203ENST00000395881 RBM12B-AS1Q9P1G2 102 aa7.27□□□□□ -1.25
RTFDC1-203ENST00000395881 UQCR11O14957 56 aa7.25□□□□□ -1.25
RTFDC1-203ENST00000395881 S4R3F8 94 aa7.25□□□□□ -1.25
RTFDC1-203ENST00000395881 SPATA8Q6RVD6 105 aa7.22□□□□□ -1.25
RTFDC1-203ENST00000395881 A8MU10 97 aa7.2□□□□□ -1.26
RTFDC1-203ENST00000395881 MIR22HGQ0VDD5 57 aa7.17□□□□□ -1.26
RTFDC1-203ENST00000395881 KRTAP19-2Q3LHN2 52 aa7.14□□□□□ -1.27
RTFDC1-203ENST00000395881 A0A1B0GU33 70 aa7.12□□□□□ -1.27
RTFDC1-203ENST00000395881 CSAG1Q6PB30 78 aa7.08□□□□□ -1.28
RTFDC1-203ENST00000395881 PMAIP1Q13794 54 aa7.08□□□□□ -1.28
RTFDC1-203ENST00000395881 KRTAP10-6P60371 365 aaPredicted RBP7.05□□□□□ -1.28
RTFDC1-203ENST00000395881 H0YAA0 97 aa7.03□□□□□ -1.28
RTFDC1-203ENST00000395881 A6NN06 94 aa7.02□□□□□ -1.29
RTFDC1-203ENST00000395881 MT1HP80294 61 aa7.01□□□□□ -1.29
RTFDC1-203ENST00000395881 FLGP20930 4061 aaPredicted RBP6.98□□□□□ -1.29
RTFDC1-203ENST00000395881 ADM2Q7Z4H4 148 aa6.94□□□□□ -1.3
RTFDC1-203ENST00000395881 P0C880 135 aa6.92□□□□□ -1.3
RTFDC1-203ENST00000395881 KRTAP9-2Q9BYQ4 174 aa6.91□□□□□ -1.3
RTFDC1-203ENST00000395881 KTN1-AS1Q86SY8 53 aa6.88□□□□□ -1.31
RTFDC1-203ENST00000395881 M0QZ58 72 aa6.86□□□□□ -1.31
RTFDC1-203ENST00000395881 M0R2T5 61 aa6.85□□□□□ -1.31
RTFDC1-203ENST00000395881 KRTAP13-4Q3LI77 160 aa6.85□□□□□ -1.31
RTFDC1-203ENST00000395881 K7ERS5 55 aa6.84□□□□□ -1.31
RTFDC1-203ENST00000395881 A0A0D9SG42 100 aa6.72□□□□□ -1.33
RTFDC1-203ENST00000395881 R4GN34 69 aa6.69□□□□□ -1.34
RTFDC1-203ENST00000395881 KRTAP9-8Q9BYQ0 159 aa6.67□□□□□ -1.34
RTFDC1-203ENST00000395881 FSIP2Q5CZC0 6907 aa6.67□□□□□ -1.34
RTFDC1-203ENST00000395881 KRTAP12-1P59990 96 aa6.64□□□□□ -1.35
RTFDC1-203ENST00000395881 KRTAP9-6A0A140TA67 174 aa6.63□□□□□ -1.35
RTFDC1-203ENST00000395881 CRIPTQ9P021 101 aa6.63□□□□□ -1.35
RTFDC1-203ENST00000395881 KRTAP12-2P59991 146 aa6.61□□□□□ -1.35
RTFDC1-203ENST00000395881 MT2AP02795 61 aa6.58□□□□□ -1.36
RTFDC1-203ENST00000395881 ROMO1P60602 79 aa6.57□□□□□ -1.36
RTFDC1-203ENST00000395881 SPINT4Q6UDR6 99 aa6.56□□□□□ -1.36
RTFDC1-203ENST00000395881 CRCT1Q9UGL9 99 aa6.55□□□□□ -1.36
RTFDC1-203ENST00000395881 MT1FP04733 61 aa6.53□□□□□ -1.36
RTFDC1-203ENST00000395881 PRAC1Q96KF2 57 aa6.53□□□□□ -1.36
RTFDC1-203ENST00000395881 USH2AO75445 5202 aa6.51□□□□□ -1.37
RTFDC1-203ENST00000395881 LINC01554Q52M75 96 aa6.51□□□□□ -1.37
RTFDC1-203ENST00000395881 KRTAP10-10P60014 251 aa6.48□□□□□ -1.37
RTFDC1-203ENST00000395881 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
RTFDC1-203ENST00000395881 SSPOA2VEC9 5147 aa6.42□□□□□ -1.38
RTFDC1-203ENST00000395881 KRTAP25-1Q3LHN0 102 aa6.41□□□□□ -1.38
RTFDC1-203ENST00000395881 H3BS24 57 aa6.4□□□□□ -1.38
RTFDC1-203ENST00000395881 SPRR2GQ9BYE4 73 aa6.4□□□□□ -1.39
RTFDC1-203ENST00000395881 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
RTFDC1-203ENST00000395881 KRTAP4-6Q9BYQ5 205 aa6.31□□□□□ -1.4
RTFDC1-203ENST00000395881 KRTAP19-1Q8IUB9 90 aa6.31□□□□□ -1.4
RTFDC1-203ENST00000395881 CAMK2N1Q7Z7J9 78 aa6.28□□□□□ -1.4
RTFDC1-203ENST00000395881 C10orf95Q9H7T3 257 aa6.26□□□□□ -1.41
RTFDC1-203ENST00000395881 FCGBPQ9Y6R7 5405 aaPredicted RBP6.23□□□□□ -1.41
RTFDC1-203ENST00000395881 PLAC4Q8WY50 150 aa6.2□□□□□ -1.42
RTFDC1-203ENST00000395881 KRTAP19-8Q3LI54 63 aa6.18□□□□□ -1.42
RTFDC1-203ENST00000395881 KRTAP19-6Q3LI70 58 aa6.14□□□□□ -1.43
RTFDC1-203ENST00000395881 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.1□□□□□ -1.43
RTFDC1-203ENST00000395881 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
RTFDC1-203ENST00000395881 TNP1P09430 55 aa6.06□□□□□ -1.44
RTFDC1-203ENST00000395881 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
RTFDC1-203ENST00000395881 MT1BP07438 61 aa6.04□□□□□ -1.44
RTFDC1-203ENST00000395881 MACF1Q9UPN3 7388 aaKnown RBP6.02□□□□□ -1.45
RTFDC1-203ENST00000395881 KRTAP9-7A8MTY7 169 aa5.97□□□□□ -1.45
RTFDC1-203ENST00000395881 SYNE2Q8WXH0 6885 aaKnown RBP5.94□□□□□ -1.46
RTFDC1-203ENST00000395881 KRTAP4-8Q9BYQ9 185 aa5.93□□□□□ -1.46
RTFDC1-203ENST00000395881 KRTAP10-5P60370 271 aa5.89□□□□□ -1.47
RTFDC1-203ENST00000395881 MT1XP80297 61 aa5.89□□□□□ -1.47
RTFDC1-203ENST00000395881 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
RTFDC1-203ENST00000395881 KRTAP4-12Q9BQ66 201 aa5.81□□□□□ -1.48
RTFDC1-203ENST00000395881 KRTAP6-3Q3LI67 103 aa5.74□□□□□ -1.49
RTFDC1-203ENST00000395881 KRTAP15-1Q3LI76 137 aa5.73□□□□□ -1.49
RTFDC1-203ENST00000395881 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
RTFDC1-203ENST00000395881 LCE3AQ5TA76 89 aa5.7□□□□□ -1.5
RTFDC1-203ENST00000395881 KRTAP10-12P60413 245 aa5.68□□□□□ -1.5
RTFDC1-203ENST00000395881 LCE3BQ5TA77 95 aa5.68□□□□□ -1.5
RTFDC1-203ENST00000395881 KRTAP8-1Q8IUC2 63 aa5.68□□□□□ -1.5
RTFDC1-203ENST00000395881 KRTAP10-7P60409 375 aaPredicted RBP5.63□□□□□ -1.51
RTFDC1-203ENST00000395881 NEBP20929 6669 aa5.57□□□□□ -1.52
RTFDC1-203ENST00000395881 MUC12Q9UKN1 5478 aa5.56□□□□□ -1.52
RTFDC1-203ENST00000395881 KMT2DO14686 5537 aa5.56□□□□□ -1.52
RTFDC1-203ENST00000395881 KRTAP5-9P26371 169 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms