RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 SPTSSBQ8NFR3 76 aa9.84□□□□□ -0.83
LMNB1-202ENST00000395354 PSPHP1O15172 72 aa9.8□□□□□ -0.84
LMNB1-202ENST00000395354 PRR15LQ9BU68 103 aa9.78□□□□□ -0.84
LMNB1-202ENST00000395354 Q5VV11 94 aa9.74□□□□□ -0.85
LMNB1-202ENST00000395354 RBM12B-AS1Q9P1G2 102 aa9.73□□□□□ -0.85
LMNB1-202ENST00000395354 H1FX-AS1Q4G0G2 97 aa9.68□□□□□ -0.86
LMNB1-202ENST00000395354 A0A1B0GU69 56 aa9.66□□□□□ -0.86
LMNB1-202ENST00000395354 S4R3F8 94 aa9.63□□□□□ -0.87
LMNB1-202ENST00000395354 KRTAP19-2Q3LHN2 52 aa9.63□□□□□ -0.87
LMNB1-202ENST00000395354 LCA10Q71F78 164 aa9.6□□□□□ -0.87
LMNB1-202ENST00000395354 SEC61GP60059 68 aa9.58□□□□□ -0.88
LMNB1-202ENST00000395354 KRTAP3-3Q9BYR6 98 aa9.58□□□□□ -0.88
LMNB1-202ENST00000395354 LCE2CQ5TA81 110 aa9.58□□□□□ -0.88
LMNB1-202ENST00000395354 FAT4Q6V0I7 4981 aa9.53□□□□□ -0.88
LMNB1-202ENST00000395354 A6NED7 52 aa9.52□□□□□ -0.89
LMNB1-202ENST00000395354 BRK1Q8WUW1 75 aa9.52□□□□□ -0.89
LMNB1-202ENST00000395354 PRO0628Q9UI54 55 aa9.45□□□□□ -0.9
LMNB1-202ENST00000395354 UQCR11O14957 56 aa9.41□□□□□ -0.9
LMNB1-202ENST00000395354 CSAG1Q6PB30 78 aa9.41□□□□□ -0.9
LMNB1-202ENST00000395354 CDC42SE1Q9NRR8 79 aa9.41□□□□□ -0.9
LMNB1-202ENST00000395354 MT1HP80294 61 aa9.41□□□□□ -0.9
LMNB1-202ENST00000395354 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
LMNB1-202ENST00000395354 FLGP20930 4061 aaPredicted RBP9.36□□□□□ -0.91
LMNB1-202ENST00000395354 SPATA8Q6RVD6 105 aa9.33□□□□□ -0.92
LMNB1-202ENST00000395354 A0A1B0GU33 70 aa9.33□□□□□ -0.92
LMNB1-202ENST00000395354 M0R2T5 61 aa9.32□□□□□ -0.92
LMNB1-202ENST00000395354 MIR22HGQ0VDD5 57 aa9.31□□□□□ -0.92
LMNB1-202ENST00000395354 KRTAP3-2Q9BYR7 98 aa9.29□□□□□ -0.92
LMNB1-202ENST00000395354 KRTAP10-6P60371 365 aaPredicted RBP9.29□□□□□ -0.92
LMNB1-202ENST00000395354 A8MU10 97 aa9.28□□□□□ -0.92
LMNB1-202ENST00000395354 H0YAA0 97 aa9.27□□□□□ -0.93
LMNB1-202ENST00000395354 ADM2Q7Z4H4 148 aa9.21□□□□□ -0.93
LMNB1-202ENST00000395354 P0C880 135 aa9.16□□□□□ -0.94
LMNB1-202ENST00000395354 LORP23490 312 aaPredicted RBP9.1□□□□□ -0.95
LMNB1-202ENST00000395354 M0QZ58 72 aa9.03□□□□□ -0.96
LMNB1-202ENST00000395354 PMAIP1Q13794 54 aa9.03□□□□□ -0.96
LMNB1-202ENST00000395354 KRTAP13-4Q3LI77 160 aa9.03□□□□□ -0.96
LMNB1-202ENST00000395354 SVIPQ8NHG7 77 aa9.03□□□□□ -0.96
LMNB1-202ENST00000395354 KRTAP9-8Q9BYQ0 159 aa9□□□□□ -0.97
LMNB1-202ENST00000395354 A6NN06 94 aa8.97□□□□□ -0.97
LMNB1-202ENST00000395354 MT2AP02795 61 aa8.93□□□□□ -0.98
LMNB1-202ENST00000395354 K7ERS5 55 aa8.89□□□□□ -0.99
LMNB1-202ENST00000395354 R4GN34 69 aa8.88□□□□□ -0.99
LMNB1-202ENST00000395354 A0A0D9SG42 100 aa8.86□□□□□ -0.99
LMNB1-202ENST00000395354 MT1FP04733 61 aa8.86□□□□□ -0.99
LMNB1-202ENST00000395354 KRTAP10-10P60014 251 aa8.86□□□□□ -0.99
LMNB1-202ENST00000395354 CRIPTQ9P021 101 aa8.82□□□□□ -1
LMNB1-202ENST00000395354 KRTAP12-1P59990 96 aa8.73□□□□□ -1.01
LMNB1-202ENST00000395354 KTN1-AS1Q86SY8 53 aa8.72□□□□□ -1.01
LMNB1-202ENST00000395354 LCE2DQ5TA82 110 aaPredicted RBP8.71□□□□□ -1.02
LMNB1-202ENST00000395354 KRTAP9-3Q9BYQ3 159 aa8.69□□□□□ -1.02
LMNB1-202ENST00000395354 KRTAP12-2P59991 146 aa8.69□□□□□ -1.02
LMNB1-202ENST00000395354 LINC01554Q52M75 96 aa8.67□□□□□ -1.02
LMNB1-202ENST00000395354 SPINT4Q6UDR6 99 aa8.66□□□□□ -1.02
LMNB1-202ENST00000395354 KRTAP9-2Q9BYQ4 174 aa8.63□□□□□ -1.03
LMNB1-202ENST00000395354 SPRR2GQ9BYE4 73 aa8.55□□□□□ -1.04
LMNB1-202ENST00000395354 LCE2BO14633 110 aa8.53□□□□□ -1.04
LMNB1-202ENST00000395354 ROMO1P60602 79 aa8.53□□□□□ -1.04
LMNB1-202ENST00000395354 KRTAP19-1Q8IUB9 90 aa8.53□□□□□ -1.04
LMNB1-202ENST00000395354 FSIP2Q5CZC0 6907 aa8.39□□□□□ -1.07
LMNB1-202ENST00000395354 PRAC1Q96KF2 57 aa8.39□□□□□ -1.07
LMNB1-202ENST00000395354 USH2AO75445 5202 aa8.36□□□□□ -1.07
LMNB1-202ENST00000395354 KRTAP19-8Q3LI54 63 aa8.35□□□□□ -1.07
LMNB1-202ENST00000395354 CAMK2N1Q7Z7J9 78 aa8.33□□□□□ -1.08
LMNB1-202ENST00000395354 PLAC4Q8WY50 150 aa8.3□□□□□ -1.08
LMNB1-202ENST00000395354 MT1BP07438 61 aa8.27□□□□□ -1.09
LMNB1-202ENST00000395354 CRCT1Q9UGL9 99 aa8.26□□□□□ -1.09
LMNB1-202ENST00000395354 C10orf95Q9H7T3 257 aa8.24□□□□□ -1.09
LMNB1-202ENST00000395354 KRTAP25-1Q3LHN0 102 aa8.22□□□□□ -1.09
LMNB1-202ENST00000395354 SSPOA2VEC9 5147 aa8.18□□□□□ -1.1
LMNB1-202ENST00000395354 KRTAP9-6A0A140TA67 174 aa8.14□□□□□ -1.11
LMNB1-202ENST00000395354 KRTAP19-6Q3LI70 58 aa8.12□□□□□ -1.11
LMNB1-202ENST00000395354 TNP1P09430 55 aa7.99□□□□□ -1.13
LMNB1-202ENST00000395354 KRTAP10-5P60370 271 aa7.97□□□□□ -1.13
LMNB1-202ENST00000395354 FCGBPQ9Y6R7 5405 aaPredicted RBP7.92□□□□□ -1.14
LMNB1-202ENST00000395354 MT1XP80297 61 aa7.91□□□□□ -1.14
LMNB1-202ENST00000395354 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.14
LMNB1-202ENST00000395354 PP632Q6XCG6 107 aa7.89□□□□□ -1.15
LMNB1-202ENST00000395354 KRTAP23-1A1A580 65 aa7.87□□□□□ -1.15
LMNB1-202ENST00000395354 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.65□□□□□ -1.18
LMNB1-202ENST00000395354 MACF1Q9UPN3 7388 aaKnown RBP7.62□□□□□ -1.19
LMNB1-202ENST00000395354 KRTAP10-7P60409 375 aaPredicted RBP7.58□□□□□ -1.2
LMNB1-202ENST00000395354 LCE3AQ5TA76 89 aa7.58□□□□□ -1.2
LMNB1-202ENST00000395354 KRTAP10-12P60413 245 aa7.57□□□□□ -1.2
LMNB1-202ENST00000395354 SYNE2Q8WXH0 6885 aaKnown RBP7.51□□□□□ -1.21
LMNB1-202ENST00000395354 KRTAP8-1Q8IUC2 63 aa7.48□□□□□ -1.21
LMNB1-202ENST00000395354 KRTAP4-8A0A0G2JLE6 195 aa7.41□□□□□ -1.22
LMNB1-202ENST00000395354 KRTAP4-8Q9BYQ9 185 aa7.41□□□□□ -1.22
LMNB1-202ENST00000395354 KRTAP9-7A8MTY7 169 aa7.38□□□□□ -1.23
LMNB1-202ENST00000395354 KMT2DO14686 5537 aa7.37□□□□□ -1.23
LMNB1-202ENST00000395354 KRTAP6-3Q3LI67 103 aa7.34□□□□□ -1.23
LMNB1-202ENST00000395354 KRTAP15-1Q3LI76 137 aa7.31□□□□□ -1.24
LMNB1-202ENST00000395354 KRTAP12-3P60328 96 aa7.29□□□□□ -1.24
LMNB1-202ENST00000395354 KRTAP5-9P26371 169 aa7.24□□□□□ -1.25
LMNB1-202ENST00000395354 KRTAP19-5Q3LI72 72 aa7.18□□□□□ -1.26
LMNB1-202ENST00000395354 SPRR2FQ96RM1 72 aa7.18□□□□□ -1.26
LMNB1-202ENST00000395354 KRTAP19-7Q3SYF9 63 aa7.06□□□□□ -1.28
LMNB1-202ENST00000395354 SPRR5A0A1B0GTR4 108 aa7.04□□□□□ -1.28
LMNB1-202ENST00000395354 MUC12Q9UKN1 5478 aa7□□□□□ -1.29
LMNB1-202ENST00000395354 MT1EP04732 61 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms