RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 V9GYY9 64 aa12.29□□□□□ -0.44
CTF1-202ENST00000395019 SPTSSBQ8NFR3 76 aa12.26□□□□□ -0.45
CTF1-202ENST00000395019 KRTAP19-2Q3LHN2 52 aa12.25□□□□□ -0.45
CTF1-202ENST00000395019 FAT4Q6V0I7 4981 aa12.24□□□□□ -0.45
CTF1-202ENST00000395019 LINC01558Q9Y6Z2 57 aa12.22□□□□□ -0.45
CTF1-202ENST00000395019 S4R3F8 94 aa12.2□□□□□ -0.46
CTF1-202ENST00000395019 LCA10Q71F78 164 aa12.17□□□□□ -0.46
CTF1-202ENST00000395019 LCE2CQ5TA81 110 aa12.15□□□□□ -0.47
CTF1-202ENST00000395019 KRTAP3-3Q9BYR6 98 aa12.15□□□□□ -0.47
CTF1-202ENST00000395019 PSPHP1O15172 72 aa12.08□□□□□ -0.48
CTF1-202ENST00000395019 PRR15LQ9BU68 103 aa12.08□□□□□ -0.48
CTF1-202ENST00000395019 FLGP20930 4061 aaPredicted RBP12.03□□□□□ -0.48
CTF1-202ENST00000395019 A0A1B0GU69 56 aa12□□□□□ -0.49
CTF1-202ENST00000395019 Q5VV11 94 aa12□□□□□ -0.49
CTF1-202ENST00000395019 CSAG1Q6PB30 78 aa11.93□□□□□ -0.5
CTF1-202ENST00000395019 SEC61GP60059 68 aa11.92□□□□□ -0.5
CTF1-202ENST00000395019 MT1HP80294 61 aa11.92□□□□□ -0.5
CTF1-202ENST00000395019 LCE2AQ5TA79 106 aaPredicted RBP11.89□□□□□ -0.51
CTF1-202ENST00000395019 KRTAP3-2Q9BYR7 98 aa11.73□□□□□ -0.53
CTF1-202ENST00000395019 A6NED7 52 aa11.72□□□□□ -0.53
CTF1-202ENST00000395019 KRTAP10-6P60371 365 aaPredicted RBP11.71□□□□□ -0.53
CTF1-202ENST00000395019 H0YAA0 97 aa11.7□□□□□ -0.54
CTF1-202ENST00000395019 M0R2T5 61 aa11.68□□□□□ -0.54
CTF1-202ENST00000395019 ADM2Q7Z4H4 148 aa11.66□□□□□ -0.54
CTF1-202ENST00000395019 UQCR11O14957 56 aa11.64□□□□□ -0.55
CTF1-202ENST00000395019 A0A1B0GU33 70 aa11.64□□□□□ -0.55
CTF1-202ENST00000395019 P0C880 135 aa11.6□□□□□ -0.55
CTF1-202ENST00000395019 BRK1Q8WUW1 75 aa11.6□□□□□ -0.55
CTF1-202ENST00000395019 CDC42SE1Q9NRR8 79 aa11.54□□□□□ -0.56
CTF1-202ENST00000395019 LORP23490 312 aaPredicted RBP11.52□□□□□ -0.57
CTF1-202ENST00000395019 MIR22HGQ0VDD5 57 aa11.52□□□□□ -0.57
CTF1-202ENST00000395019 SPATA8Q6RVD6 105 aa11.52□□□□□ -0.57
CTF1-202ENST00000395019 A8MU10 97 aa11.46□□□□□ -0.57
CTF1-202ENST00000395019 KRTAP9-8Q9BYQ0 159 aa11.39□□□□□ -0.59
CTF1-202ENST00000395019 KRTAP13-4Q3LI77 160 aa11.38□□□□□ -0.59
CTF1-202ENST00000395019 PRO0628Q9UI54 55 aa11.38□□□□□ -0.59
CTF1-202ENST00000395019 M0QZ58 72 aa11.33□□□□□ -0.6
CTF1-202ENST00000395019 MT2AP02795 61 aa11.3□□□□□ -0.6
CTF1-202ENST00000395019 MT1FP04733 61 aa11.24□□□□□ -0.61
CTF1-202ENST00000395019 R4GN34 69 aa11.24□□□□□ -0.61
CTF1-202ENST00000395019 CRIPTQ9P021 101 aa11.17□□□□□ -0.62
CTF1-202ENST00000395019 A0A0D9SG42 100 aa11.15□□□□□ -0.62
CTF1-202ENST00000395019 KRTAP10-10P60014 251 aa11.13□□□□□ -0.63
CTF1-202ENST00000395019 LINC01554Q52M75 96 aa11.02□□□□□ -0.65
CTF1-202ENST00000395019 KRTAP9-3Q9BYQ3 159 aa11□□□□□ -0.65
CTF1-202ENST00000395019 K7ERS5 55 aa10.98□□□□□ -0.65
CTF1-202ENST00000395019 PMAIP1Q13794 54 aa10.98□□□□□ -0.65
CTF1-202ENST00000395019 LCE2DQ5TA82 110 aaPredicted RBP10.98□□□□□ -0.65
CTF1-202ENST00000395019 KRTAP12-1P59990 96 aa10.96□□□□□ -0.65
CTF1-202ENST00000395019 KRTAP9-2Q9BYQ4 174 aa10.95□□□□□ -0.66
CTF1-202ENST00000395019 A6NN06 94 aa10.93□□□□□ -0.66
CTF1-202ENST00000395019 SPRR2GQ9BYE4 73 aa10.93□□□□□ -0.66
CTF1-202ENST00000395019 KRTAP12-2P59991 146 aa10.92□□□□□ -0.66
CTF1-202ENST00000395019 SPINT4Q6UDR6 99 aa10.9□□□□□ -0.66
CTF1-202ENST00000395019 KRTAP19-1Q8IUB9 90 aa10.89□□□□□ -0.67
CTF1-202ENST00000395019 LCE2BO14633 110 aa10.84□□□□□ -0.67
CTF1-202ENST00000395019 USH2AO75445 5202 aa10.76□□□□□ -0.69
CTF1-202ENST00000395019 FSIP2Q5CZC0 6907 aa10.67□□□□□ -0.7
CTF1-202ENST00000395019 KRTAP19-8Q3LI54 63 aa10.65□□□□□ -0.7
CTF1-202ENST00000395019 PLAC4Q8WY50 150 aa10.55□□□□□ -0.72
CTF1-202ENST00000395019 ROMO1P60602 79 aa10.55□□□□□ -0.72
CTF1-202ENST00000395019 KTN1-AS1Q86SY8 53 aa10.54□□□□□ -0.72
CTF1-202ENST00000395019 SSPOA2VEC9 5147 aa10.53□□□□□ -0.72
CTF1-202ENST00000395019 CAMK2N1Q7Z7J9 78 aa10.52□□□□□ -0.73
CTF1-202ENST00000395019 MT1BP07438 61 aa10.5□□□□□ -0.73
CTF1-202ENST00000395019 SVIPQ8NHG7 77 aa10.44□□□□□ -0.74
CTF1-202ENST00000395019 CRCT1Q9UGL9 99 aa10.43□□□□□ -0.74
CTF1-202ENST00000395019 C10orf95Q9H7T3 257 aa10.37□□□□□ -0.75
CTF1-202ENST00000395019 KRTAP9-6A0A140TA67 174 aa10.3□□□□□ -0.76
CTF1-202ENST00000395019 PRAC1Q96KF2 57 aa10.28□□□□□ -0.76
CTF1-202ENST00000395019 KRTAP19-6Q3LI70 58 aa10.25□□□□□ -0.77
CTF1-202ENST00000395019 FCGBPQ9Y6R7 5405 aaPredicted RBP10.18□□□□□ -0.78
CTF1-202ENST00000395019 MT1XP80297 61 aa10.15□□□□□ -0.78
CTF1-202ENST00000395019 KRTAP10-5P60370 271 aa10.13□□□□□ -0.79
CTF1-202ENST00000395019 KRTAP25-1Q3LHN0 102 aa10.11□□□□□ -0.79
CTF1-202ENST00000395019 TNP1P09430 55 aa10.04□□□□□ -0.8
CTF1-202ENST00000395019 PRO2289Q9P1D8 64 aa10.03□□□□□ -0.8
CTF1-202ENST00000395019 KRTAP23-1A1A580 65 aa9.78□□□□□ -0.84
CTF1-202ENST00000395019 PP632Q6XCG6 107 aa9.78□□□□□ -0.84
CTF1-202ENST00000395019 KRTAP10-7P60409 375 aaPredicted RBP9.74□□□□□ -0.85
CTF1-202ENST00000395019 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.71□□□□□ -0.86
CTF1-202ENST00000395019 MACF1Q9UPN3 7388 aaKnown RBP9.7□□□□□ -0.86
CTF1-202ENST00000395019 KRTAP10-12P60413 245 aa9.64□□□□□ -0.87
CTF1-202ENST00000395019 LCE3AQ5TA76 89 aa9.6□□□□□ -0.87
CTF1-202ENST00000395019 KMT2DO14686 5537 aa9.59□□□□□ -0.87
CTF1-202ENST00000395019 SYNE2Q8WXH0 6885 aaKnown RBP9.49□□□□□ -0.89
CTF1-202ENST00000395019 KRTAP8-1Q8IUC2 63 aa9.43□□□□□ -0.9
CTF1-202ENST00000395019 KRTAP4-8A0A0G2JLE6 195 aa9.41□□□□□ -0.9
CTF1-202ENST00000395019 KRTAP4-8Q9BYQ9 185 aa9.41□□□□□ -0.9
CTF1-202ENST00000395019 KRTAP9-7A8MTY7 169 aa9.35□□□□□ -0.91
CTF1-202ENST00000395019 KRTAP6-3Q3LI67 103 aa9.23□□□□□ -0.93
CTF1-202ENST00000395019 KRTAP12-3P60328 96 aa9.23□□□□□ -0.93
CTF1-202ENST00000395019 KRTAP19-5Q3LI72 72 aa9.17□□□□□ -0.94
CTF1-202ENST00000395019 KRTAP5-9P26371 169 aa9.14□□□□□ -0.95
CTF1-202ENST00000395019 MUC12Q9UKN1 5478 aa9.1□□□□□ -0.95
CTF1-202ENST00000395019 KRTAP19-7Q3SYF9 63 aa9.06□□□□□ -0.96
CTF1-202ENST00000395019 SPRR2FQ96RM1 72 aa9.06□□□□□ -0.96
CTF1-202ENST00000395019 KRTAP15-1Q3LI76 137 aa9.05□□□□□ -0.96
CTF1-202ENST00000395019 MDN1Q9NU22 5596 aa8.96□□□□□ -0.98
CTF1-202ENST00000395019 MT1EP04732 61 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms